Pungitius pungitius (ninespine stickleback): 119211548
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Entry
119211548 CDS
T07626
Name
(RefSeq) basic helix-loop-helix ARNT-like protein 2 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119211548
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
119211548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_NCOA
bHLH_INO4
bHLH_INO2
PAS_2
Motif
Other DBs
NCBI-GeneID:
119211548
NCBI-ProteinID:
XP_037318427
LinkDB
All DBs
Position
2:complement(10370077..10381243)
Genome browser
AA seq
701 aa
AA seq
DB search
MNRSCPRKTASSKPPRSKKATKECERSLVRSRTLTVSSPHPPPPRLLWKKKYGRRRVRRN
SITQQPAPSPRLLLQLLAPHAALCGPHRAHRLQSVGMSAGGADGTAHRSADLVAEEGGPK
QAASSLQAVELPRKRKGDSEESRSVDSQLDDDLGRSDEDDLQVKIKCFREPHRQIEKRRR
DKMNNLIDELAAMIPACQPLTRKLDKLTVLRKAVLHLKGLRAGTRSAFIISTHEPSIMPQ
DDLRHLLLRAADGFLLIVSCDRAKVLFISESVSKILNFDRFELTGQSLFDFIHPKDINKV
KEQLSSSECPRQRLIDAATGDQVDAPVRPPHLSTGARRSFFCRMKHNRVEEKQEDKHLLP
CMLKKKDTYQYCTLHCTGYMRSWPSSQPDSEGDVEKETSNLTCLVTVCRLLGHVPNLPSK
DINMKPSEFVTRCAIDGKFTFVEQQATTVIGYLPQEVLGTSCYEYFHQDDLRHLAEKHRQ
VLRSKEKIQTQCYKFKTKCGSYVSLQSQWVSFTNPWTKEVEFIVSSNRVVSRGPGHTIDE
EAVNSKALQENTKQLPIIPSLSSTAGTMIYAGGIGTQIANELIESYRVNSSPSSGASSPF
GPAAEKCPLVSPQTSNSASSREEAAGRSSRSLSDSRAPPGASSAASESSGEPTQVDLDSM
VVPGLSSFSSDEAAMAVIMSLLETDVNMGQTGDFENLHWPF
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaagctgtcctcgcaaaacggcgtcgagtaaacctccacgaagcaaaaaggcg
acaaaggagtgcgaaagatccctggtccgttctcgtaccctcacggtgtcctccccccac
ccccccccgccccgcctcttgtggaaaaaaaaatacgggaggaggagggtgaggagaaat
tcaatcacacaacaaccggctccctctcctcggttactactacagctgctggctccgcat
gcggcgctctgtggtcctcaccgggcacaccggctccagtccgtaggcatgtccgccgga
ggcgctgacgggacggcgcacaggtcggcagatctggttgcagaggagggagggccaaaa
caagcggcctcctcgctgcaagctgtcgagctgccaaggaaacggaagggagattcggag
gagagccgcagcgtcgactcccaattggacgacgacctcggcagatctgatgaggacgat
ctgcaagtcaaaataaaatgcttcagggagcctcaccggcagatcgagaaacggcggagg
gataagatgaacaacctcatcgacgagctggccgccatgatccccgcctgtcagcccctc
actcggaaactcgacaagctcaccgtcctgcggaaggccgtgctgcacctgaaagggctc
agagccgggacgcgcagcgcctttattatctccacccacgagccttcgatcatgcctcaa
gatgacctcaggcaccttctgctcagggctgcggatggtttcctcttaattgtaagttgt
gaccgggccaaagtcctgttcatctccgagtcggtctccaagatcctcaactttgaccgg
tttgagctgactgggcagagcctgttcgatttcatccaccccaaagacattaacaaggtg
aaggagcagctgtcgtcctcggagtgccctcgccaacgcctcatcgacgccgcaactggg
gaccaggtggatgcccccgtcaggccgccccacttgtccaccggggcccggagatccttc
ttctgccggatgaagcacaatcgggtggaggagaagcaggaggacaagcacttgctcccc
tgtatgctgaaaaagaaagacacttaccaatactgtaccctgcactgcactggatacatg
cggagttggccgagcagccagccggactctgagggggacgtcgagaaggaaacctcaaac
ctgacctgcctggtgaccgtgtgccgcctcctcggccacgtgcccaacctgccttccaaa
gacatcaacatgaagccctctgagttcgtcacccgctgtgccatcgacggaaagttcact
tttgtagaacagcaagccacgacggtcatcggctatctcccacaggaagttcttggcacg
tcgtgttacgagtacttccaccaggacgacctgcggcacctcgcggagaaacacaggcaa
gttcttcgaagcaaagagaagatccagacgcagtgctacaagttcaaaacaaagtgcggc
tcctacgtctccctccaaagtcagtgggttagtttcaccaatccgtggaccaaagaagtc
gagtttatcgtgtcttcaaacagggtggtctccagggggcctggccacacaatagatgag
gaggccgtcaactcaaaagcacttcaggagaacacaaagcagttacccataattcccagc
ctttccagcaccgcgggcacaatgatctacgcaggcggcatagggacccaaatcgcaaat
gagctcatcgaatcctacagggttaactcctccccatcgagcggagcttccagtccattt
ggccccgccgcagagaaatgtccgctggtttccccgcaaaccagcaacagtgcgtccagc
agagaggaggcggcaggccgctcatcgcggtccttgtccgactcgagggcgccaccgggc
gccagcagcgcagcttctgaaagctcaggcgagccgacccaggtggacctggacagcatg
gtggtgccaggcctgagcagcttcagcagcgacgaggcagccatggcggtcattatgagc
ttgctggagacggatgtgaacatgggtcaaacgggggactttgagaacttgcactggccc
ttctag
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