Pungitius pungitius (ninespine stickleback): 119211549
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Entry
119211549 CDS
T07626
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1-like isoform X3
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119211549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119211549
Membrane trafficking [BR:
ppug04131
]
Exocytosis
Others
Others
119211549
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
119211549
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cast
Rod_CreS
RBD-FIP
CCDC39
Tropomyosin
LEKR1
Motif
Other DBs
NCBI-GeneID:
119211549
NCBI-ProteinID:
XP_037318429
LinkDB
All DBs
Position
2:5406823..5489373
Genome browser
AA seq
1142 aa
AA seq
DB search
MYGSSRSVSKLDVVGSNGNGSGSPGRSPRLPRSPRLGHRRNSSSSSAGGLTGSCKTLSME
NIQSLNAAYATGGPMYFGDAADDPVGMNPSVPKGTTMTLGKAGARVPYGIRAAVMGSSPN
INSGGGGGAMHSDAIAFGSELQNQIQQVATVPHSMRQVRDGAMSDLQTQLREVLRENELL
RRELEAKESKLSSSMNSIKTFWSPELKKERALRKDEATKMSVWKEQYRVVQEETQHFQCS
IQALQDELRIQRDLNQLFQSDYTESVHLGNHPFAPQDMTEENFLRLHGEYERQVKELFLL
RKTVEEMELRIDTQKHTLTARDESIKKLLEMLQSKGLSSRATEEDHERTRRLADAEMTIH
QLEGLMEQRDKEMLQLREELHRRYEAAPESTKTKALQTVIEMKDAKISSMERGLRELEDE
VNMLKSNGALSTEEREEEIKQMEVYRSHAKFMKNKVEQLKEELTHSQSEKEELRQRANEL
QREVSAIEQAKQDLGRKDSELLGFRTKLETLNNQFSDSKQHVDVLKESLTAKEQRAAILQ
TEVDALRLRLEEKESLLAKKSQQISELTEEKSTQHGEISDLKDMLDVKERKVIVLQKKIE
NLQDQLRDKEKQLGGLKGRVKSLQTDTSNTDTALGTLEEALAEKERIIERLKEQREREER
EKGDEMESSKKELKELRGKVSHLQADLADRETSVLDLKEKASSLASAALKKDNRLKTLEI
SLEQKREECVKLESKLKKAQGAAADSQANTELTERISCLEEEVTRHKEDSEKAQVEVERL
LDILREMENEKNDKEKKINELESLASRQMKDQSKKVANLKHMEQLEKSRNAQLMEDAKKR
EDNLNESSLQIKDSLRQKEERIEELEEALRESVQITAEREVVLAQEEQALTHSQKQVEDL
LVAMERVKQELDVMKAKLSSTQLSLAEKEGHLTAMRAERRKHLGEVLEMKQEALLAAISE
KDANIALLELSSSKKKKTQEEVAALKREKDGLVHQLKQQTQNRMKLMADNYEDDHLKVSA
PTSEQPNNHKPSPDQILSPLLDLNHNRSKLKLYISHLTSLCQERDPIILQDFAPPPAYHR
SDSASWHTQVHSMTQEQLEAELARCEMEGAELQEYANQVLQQIAERCPDILEQVVNALED
SC
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcagctcgcgctccgtctccaagctcgatgtcgtcggatccaacggcaacggc
tccgggagccccgggcgctcgccgcgcctcccgcgctccccgcgcctgggccacaggcga
aacagcagcagcagctccgccggcgggctcaccggctcctgcaagaccctctccatggag
aacatccagtccctgaacgccgcctacgccacgggcggccccatgtacttcggcgacgcg
gccgacgaccccgtcgggatgaacccctccgtgcccaaaggcaccaccatgaccctgggc
aaggccggggcccgggtcccctacgggatcagggcggccgtcatggggagcagtcccaat
ataaacagcggagggggaggtggggcgatgcacagtgatgcaatagccttcgggtcggag
ctgcagaaccagattcaacaggtggcgaccgtgcctcattccatgagacaggtgagagac
ggagcgatgtcagacctgcagacgcagttaagagaagtgctgagagagaacgaactacta
cgcagagaactggaggccaaagagtccaagttgagctcctcgatgaactccatcaagacg
ttctggagcccagagctgaagaaagagagagcgctgaggaaggacgaagccacaaagatg
tccgtgtggaaggaacagtaccgagtggtgcaagaggaaacacagcactttcagtgctcc
atccaggccttacaagatgagctcagaatccagcgggacctcaaccagctcttccagtcc
gactacaccgagtccgttcacctcggcaaccaccccttcgcaccgcaggacatgacggag
gagaacttcctgcgcctccacggcgagtacgagcggcaggtgaaagagctcttcctcctg
aggaagactgtggaagaaatggagctgaggatagatacgcagaagcacacgctaaccgcc
agggacgaatccataaagaagttactggagatgttgcagagcaaaggcctgtcgtcacgg
gcaaccgaggaggaccacgagcgaacgaggcggctggccgatgccgagatgaccatccac
caactggagggtctgatggagcagagagacaaggagatgctacagctcagagaggagctg
cacaggaggtacgaggcggcgccagagtcgaccaagaccaaggccttgcagaccgtcatc
gaaatgaaggatgccaagatcagctcgatggagcgcggcctgcgggagctggaggacgag
gtgaacatgctcaagtccaacggtgctctgagcaccgaggagagggaggaggagatcaaa
cagatggaggtctacagatcccacgccaagttcatgaagaataaggttgagcagctgaag
gaggagctaactcacagccaatctgagaaggaggagctaaggcagcgggccaatgagctc
cagcgggaggtgtccgcaattgaacaagccaagcaggatctgggtcgtaaggacagcgag
cttctgggtttcaggaccaaactggaaactttgaacaatcagttttctgacagcaaacaa
cacgtggacgtactgaaggagtccctcactgccaaggagcagagggccgccatactgcag
accgaggtggatgcgctgcgtctccgcctagaggagaaggagtctctcctcgctaaaaag
agtcagcagatatcagagctgacggaggagaagagcactcagcacggagagatcagcgac
ctcaaagacatgctggacgtcaaagagcgtaaagtgatcgtgctgcagaagaagatcgag
aacctccaggatcagctgagggacaaagagaaacagctgggcggactgaaaggccgagtc
aagtctttgcagacggacacctccaacacggacacggcgctggggacgctggaggaggct
ctggccgagaaggagcggatcatcgagcggctgaaggagcagcgggagagggaggagaga
gaaaagggcgacgagatggagtccagcaagaaggagctgaaggagttgagggggaaggtc
tcccatctgcaggctgacctggctgaccgcgagacgtccgtgctggatctgaaggagaag
gcctcctctctggcttccgccgctctgaagaaggacaacaggctgaagaccctggagatc
agcctggagcagaagagagaggagtgtgtcaaactagagagcaagctcaagaaggctcag
ggtgcagcggcggattcccaggccaacactgagctcacggagcgcatctcctgcctggag
gaggaggtgacgcggcacaaagaggattctgagaaggcccaggtggaggtggagcggctt
ctggacatcctgagggagatggagaacgagaagaacgacaaggagaaaaagatcaacgaa
ctggagagtctcgcctcaaggcagatgaaggaccagtcgaagaaggtggccaacctgaag
cacatggagcagctggagaagagccgcaacgcccagctgatggaggacgccaagaagaga
gaggacaatctgaacgaaagctccctgcagataaaggactccctccgtcagaaggaggag
cgcatcgaggagctggaggaggcgctgcgggaaagcgtgcagatcaccgccgagagggag
gtggtgctcgcccaggaggagcaggcactcacacactcccagaaacaggtggaggacctg
ctggttgccatggagagggtgaaacaggaactggacgtgatgaaagccaagctgtcgtca
actcaactctccctggccgagaaggaaggtcacctgaccgccatgcgggccgagaggcgg
aagcacctgggcgaggtgctggagatgaagcaagaagccctgctggcggccatcagcgag
aaagacgccaacatcgccctgctggagctctcctcgtccaagaagaagaaaacccaggag
gaggtggcggctctgaagagagagaaggacggtctggttcatcagctcaagcagcagacg
cagaaccggatgaagctgatggcggacaactacgaggacgaccacctgaaggtctccgcg
ccgacctctgagcagcccaacaaccacaagccctcgccggaccagattctctctcctctc
ctggatctcaatcacaaccgcagtaaactgaagctgtacatcagccacctgacctcactg
tgtcaggaacgggaccccatcatcctgcaggacttcgccccgccccccgcctatcaccgc
tccgactccgcctcctggcacacgcaggtgcacagcatgacacaggaacagttggaggcg
gagctagcgcggtgcgagatggaaggggcggagctccaggagtacgccaaccaggtcctg
cagcagatcgccgaacgatgccccgacattttagagcaagtggtcaacgcactcgaggac
agctgctga
DBGET
integrated database retrieval system
