Pungitius pungitius (ninespine stickleback): 119211572
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Entry
119211572 CDS
T07626
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04120
Ubiquitin mediated proteolysis
ppug04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119211572 (syvn1)
04120 Ubiquitin mediated proteolysis
119211572 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119211572 (syvn1)
Enzymes [BR:
ppug01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119211572 (syvn1)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119211572 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-Nse
Endonuclease_7
Motif
Other DBs
NCBI-GeneID:
119211572
NCBI-ProteinID:
XP_037318477
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All DBs
Position
2:complement(28914687..28922611)
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AA seq
626 aa
AA seq
DB search
MARAALVTATSLALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWIFHFRVLSLIGLLAVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYILHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATAEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNQTPAQAQAPPPAPAAPANAP
AAPPANVAPGMLPGFPPGVFPFWGPFPGVPPPAAAPAAPGAADAPQGSTQAAGTSQAASS
PADAGAAAPGPTMPGFPFSFPPPPFPTAPWLMPPPPPFVSSMPPPPPSLSRLSEEELREL
EAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVTTLAPPRAEGGAGAASGTNDAAAA
AASSSTDSLGQEKESASSSSSEQVGGAAASPQPADSTSTASDTEQKDELDEGAAGGEDGE
PNAAELRRRRLRKLETSTPSSAPPDN
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgagcagccttggtgaccgccaccagtctggctctgactggggccgtggtggcg
cacgcctacctcctcaaacaccagttctaccccaccgtggtctacctgaccaagagcagc
cccagcatggcggtgttgtacattcaggcctttgtgttggtgttcctgctgggaaagttc
atgaggaaggtcttttttggacagctacgggctgcagaaatggagcatctcattgagcgc
tcgtggtatgctgtgaccgagacgtgcctggcgttcactgtgttcagggacgacttctcc
ccgcgctttgtcgccctattcacgctcctgctcttcctcaagtgcttccactggctggct
gaggaccgggtggactttatggaacggagtccaaacatatcttggatttttcacttcagg
gtattatctctcattggactgctggctgtgctggacttcctgtttgtcaaccacgcctgt
cacagcatcatcacccgaggagcctcggtccagcttgtttttggatttgagtacgccatc
ctgatgacgatggtgctgacgaccttcattaagtacattttgcacaccgtcgacctgcag
agcgagaacccctgggacaacaaggcggtgtacatgctctacaccgagctcttcaccggt
ttcatcaaagtgctgctctacattgccttcatgaccatcatgataaaggtccacaccttc
cccctttttgccatccggcccatgtatctggccatgaggcagtttaagaaagctgtaacg
gatgccataatgtctcggagagcaatccgtaacatgaatacattataccccgatgccact
gctgaagatctgcaggcttctgacaacgtctgtatcatctgtcgagaggaaatggtcacc
ggggccaagaaactgccatgtaatcacattttccactccagctgcctgcgctcctggttc
cagaggcagcagacctgcccgacctgtcgcatggacgtcctccgcgcgtccaacaacaat
cagacgccggcccaggcccaagccccgcccccagctcctgcggcccctgccaatgcccca
gccgccccgcccgccaacgtggccccaggcatgttacccggcttcccgcctggcgtcttc
cccttctggggtcccttccccggggtgccgccccccgccgcagcgcctgcagctccgggt
gccgccgatgcgccgcagggcagcacgcaggcagccggcaccagccaggccgcctcctcg
cctgcagacgcgggcgccgcagctccagggccgacgatgcccggcttccccttctccttc
ccccctccccccttccccactgcaccatggctgatgcctccccctcctcccttcgtgtcg
tccatgcctccgccgcctccttccctgtcgcggctgtccgaggaggagctgagggagctg
gaggcagagggccggcggggcctcgaggcccgactccagtgtctccagaacatccacacc
ttgctggacgccgccatgctcaacatccaccactacctcagcaccgtcaccacactcgct
cctccacgggcggagggcggcgccggagcagcgagcgggacaaatgacgccgccgccgcc
gcggccagcagcagtacggacagcctcggccaagagaaggagtccgccagctcctcgagt
agtgagcaggtgggcggagcggctgcctcccctcagccggctgactccacttccaccgcc
tctgacacggagcaaaaagacgagctggacgaaggagcggcggggggggaggacggagag
cccaacgccgcagagctgaggcggcggcgcctccgaaagctggagacgtcgactccgtcc
tccgcgcctcccgacaactga
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