Pungitius pungitius (ninespine stickleback): 119212468
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Entry
119212468 CDS
T07626
Symbol
abca5
Name
(RefSeq) ATP-binding cassette sub-family A member 5
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119212468 (abca5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppug02000
]
119212468 (abca5)
Transporters [BR:
ppug02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
119212468 (abca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
AAA_21
RsgA_GTPase
R1_ABCA1
AAA_29
AAA_23
MMR_HSR1
ABC2_membrane
Motif
Other DBs
NCBI-GeneID:
119212468
NCBI-ProteinID:
XP_062416204
LinkDB
All DBs
Position
21:676024..684166
Genome browser
AA seq
1133 aa
AA seq
DB search
MYFIPEASIRETPSRPDVLQMRHAASMQPVHRRDAAVWHQTRSLLYKNLLIKWRTKQQSL
QELVLPLLLLGLLILISTQNPHVYYGSISTVELEQHELFFKGLGYTPISNVTSHIMEEVA
QELHLQDRLEMFASEEDLENASLYEPSSYVGVVFTDSSATSYKLRFPYIELPLHSDYTES
IGNCFTSLLNCKAANYWYSGFIRLQSLIDAAIIQMQTKRTVWSEMDLKVVMMGQPGSVEV
QKFPHALISIYLVLAFTPFVTFLIVNVAAEKEHRLKDTMTMMGLYDTSFWLSWGLLYAAL
VTAMSFLMAIIATYTALFPNSNFLVVFVLIFLYGISSIFFSFMLTPLFKKPKFASTVGSM
LTVVFGCLSLFTVLIKDFPQPLVWFFCLLSPSAFSIGIAQVVYLEAQGDGAVFSSLANGP
HPLYVPLLMLVVDCVLYLLLAIYLDQVLPGEFRKRRSLVYFLKPSYWSKHRKRYVEVSSV
YDAEGKGATGGAESVEPVSAEFRGKEAIRINNIQKVYKEKDNVVEALRGLTFDIYEGQIT
ALLGHSGAGKSTLMNILCGICSPTGGSATIYGSPVAEMADGSDMKQLVGICPQFNIIFDV
LTVEEHLRIFAAVKGILPSDIEAEVSKVLKDLDLEKIKSAQAKNLSGGQKRKLSVGIAIL
GDPKILLLDEPTAGMDPCSRHQVWSLLKSSRAGRVIVLSTHYMDEADILADRKAVISQGM
LRCVGSSMYLKVKCGVGYHLRMSISQGCGAENICSLVTQHVPKATVSRQHEAELTFTLPF
ESMDTFSGLFSELEDKPDLGIINYGVSMTTLEDVFLRLEAEAEVDQADYSVFSREPAAEE
ESDGASVDDQDQRLLAFSDGKSDVVSGHALWRQQFSAVAWLHMLNMHRERKAFIYTLALF
LLFVSAVLVLSLVSGNLQIHSPEREFLPIYLLKSNQVQRRYATSLLVQNSSESDISDLIR
NLQSQNIKVEMMTHSDYMAAAPHSAAINVTGSSKGFKYSVAFNSTTVHSLPMAVNVLSNA
LLRGLNGTGRIRTWTKPFYYQIPDATSYALVYIEAIILGMLAAGMPAYFAMGHTRDREIK
CRSTLRISGLVPSAYWCGQAAVDIPFYYLILSSMTIVLFSFHTGSLLTSSNLT
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcatacctgaggccagcattcgggagacgccttctcgcccggacgtgctccag
atgaggcacgctgcaagtatgcagcccgttcatagaagagatgctgccgtctggcaccaa
acaagaagcctcctctacaagaatctgctcatcaaatggaggaccaagcagcagagcctt
caggaactcgtcctacctctgctcctcttgggcctcctgatactcatcagcacccagaat
cctcacgtttactatggaagcatcagcaccgtggagctggagcagcacgagctcttcttc
aaaggcctgggctacactccgatcagcaacgtcaccagccacattatggaagaggtggcc
caggagttgcacctgcaggatcgtctggagatgtttgccagtgaggaggaccttgagaac
gccagcctgtatgagccctccagctacgtcggggtggtgttcacggacagctcggccacg
tcgtacaagctacgcttcccgtacatcgagctgcctttacatagcgactacacagaatct
attggcaactgtttcaccagcttgttgaactgcaaagcagcgaactactggtactctggc
ttcatccgcctccagtccctgatcgacgcagccatcatccagatgcagacgaagcgcacc
gtgtggagcgagatggacctgaaggtggtcatgatgggtcagccaggctccgttgaggtg
cagaagttcccccacgccctcatctccatctacctggtcctggccttcacaccctttgtc
accttcctcatcgtcaatgtggcagctgagaaggagcatcgcctcaaagacaccatgacc
atgatgggtctctacgacacctccttctggttgtcgtggggcctcctgtatgcggctctg
gtcactgccatgtccttcctgatggccatcatcgctacgtacaccgccctgttccccaac
agtaacttcctggttgtctttgtcctcatcttcctctatggaatatcatcgatctttttc
tccttcatgctgactccgttgtttaagaagcccaagtttgccagcacggtgggctccatg
ctgacggtggtgttcggctgcctgtccctgttcaccgtgctgataaaggacttcccgcag
ccactggtctggtttttctgcctcctctcccccagcgccttctccatcgggatcgcccag
gtggtgtacctggaggcccagggagacggtgctgtgttttcctctctggccaacggtcct
catcctctttacgtgcccctgctcatgctggttgtggactgcgtcctctaccttctgttg
gctatctacctggaccaggtgctgcccggtgagttcagaaagaggaggtccttggtttac
ttcctgaagccatcctattggtccaaacatagaaagcgctacgttgaagtgagctccgtg
tacgacgccgaggggaaaggagcaaccggcggagccgagtccgtggagccggtttctgcc
gagttcagagggaaagaggccatcaggatcaacaacatccagaaagtttacaaggagaaa
gataacgtggtggaggctctgagaggtttgacctttgacatctacgagggccagatcacg
gccctgctggggcacagcggggctggaaagtccactctcatgaacatcctgtgtggcatc
tgctcccccactggcggctcggccaccatctacggctcccccgtggcagagatggcggac
ggctcggacatgaagcagctggtgggcatttgtccccagttcaacatcatctttgacgtg
ctcactgtggaggaacacctcaggatatttgcagccgtcaaagggatcctcccatcggac
atcgaggccgaggtaagcaaagtgctgaaggacctggacttggagaagatcaagtcggct
caggccaaaaacctgagcggaggccagaagaggaaactgtctgtgggcatcgccatcctc
ggagacccaaagatccttctgttggacgagcccacagcgggcatggacccctgctccagg
caccaggtgtggtcgctgctcaagagcagccgggccggccgagtcatcgtcctcagcacg
cactacatggacgaggcggacatcctggctgatcgtaaagctgtgatctctcagggaatg
ctgcgatgcgtcggctcttctatgtacctcaaggtcaagtgtggcgttggatatcatctc
aggatgtcgatcagtcagggatgtggagctgaaaacatctgttcactggtcacccagcat
gttcccaaggcgacggtatcccgacaacacgaggccgagctcaccttcactctgcctttt
gagagcatggacacgttttcaggtttgttctcagagctcgaagataaacccgatctggga
attatcaactacggggtttccatgacaacgctggaggatgtttttcttcgcttggaggca
gaggctgaagtggaccaagccgactacagcgtgttcagccgggagccggcggcggaggag
gagagcgacggcgcctccgtggacgaccaggaccagcggctgctggccttctcagacggc
aagtcggacgtggtgtcgggtcacgcgctgtggcgccagcagttcagcgctgtggcctgg
ctgcacatgctcaacatgcacagggagaggaaggccttcatctacaccctggccctgttc
ctgctgttcgtctccgccgtgctggtcctatctctggtctcgggaaacctccagattcat
tcccccgaacgggagtttctgcccatttacctcctcaaaagcaaccaggtgcagcggaga
tacgccaccagcctcctggtgcagaactcctcagaatctgatatttccgacttaatacgc
aacctgcagtctcagaacatcaaagtggagatgatgacgcacagcgactacatggccgcc
gctccccacagcgccgccatcaacgtgacaggatccagcaagggattcaaatacagcgtc
gcgttcaacagcaccacggtccactcgctgccgatggctgtcaacgtgctgagcaacgct
ctcctcagaggcctgaacggcaccggccggatccgaacctggaccaaacccttttattat
caaatcccagatgctacgtcctacgcgctggtgtacatagaggccatcatactgggaatg
ctggctgctggaatgccggcgtatttcgcaatgggccacactcgagaccgagagatcaag
tgtcgctccacccttcgtatctcgggtctggttccgtcagcctactggtgcggccaggca
gcggtggacatccccttctactacctcatcctgtccagcatgaccattgtcctcttctcc
ttccacaccggcagcctgctcacctccagcaacctcacc
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