Pungitius pungitius (ninespine stickleback): 119212478
Help
Entry
119212478 CDS
T07626
Symbol
jmjd1cb
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119212478 (jmjd1cb)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
119212478 (jmjd1cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
119212478
NCBI-ProteinID:
XP_037318802
LinkDB
All DBs
Position
21:complement(9633566..9714816)
Genome browser
AA seq
2923 aa
AA seq
DB search
MAVEARPELVGKRFLCVGGDEPPEIGDIGRWPWRSGVIRAVNHLDSDNPDLTVYVEFDDQ
EWEKREWVKVYEDFQLFLLEHQLVWAKRKEGAGGAGAGAGLLQGTKAKHIQWPALAFKLV
VGKSLLSSVTAVEFFLDRQLDFLSDHSAFQPYQDEVDSLSPVLRDNHQLHEEVRGWLKDQ
KVQEIFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFSRNMVVMNDQVLEPQNVDPS
MIQMTFLDDVVHSLLKGENIGITSRRRSRSSQNNNSTHMTGGRPSGTTGSTQSHYTRAQA
NSPRPIMTSSGPNPKGSQGTPASQQQPASQSHHSPGGSGREQREQRNARSSRRKGSDSSV
PEEEKERREESTARDSKSKAKQSVNKRRKVEEDEKKAGLKRLKTDMTSDLSESSDSENPH
NKRTAHSSCSSSSSSSSSSSSSSSSSSSEPNSENELKSRGSDVKQSGVSKKEEELQPVIQ
GTKINNSSSAIGRLSPWAELQSAEDSKKGVAKDTGNISTKEEEELVAVTQITQSPRQQTT
PISDPVQAGIVDSSKSTVKVSSRSQTPSSQLGGGCVIDITDEAQATVHQESSEAVSALLA
SQKAESTALSPYLPLNPSPVSSPPVPQSPSPSEGGRRADNEPPMHPHGILGGGMAAARSL
SNKMEFAPSEVIRPVTSIVDNVVLVEKEKTSLPHHHHHHHQPPQQQQQQQQQHAQHYTSI
HPGIKSPSLSEETRKHPLQQPPPHKMNTVHPPELARSRISPNTAPTQLNTLKQKPQHPNN
SQSHPYPNTNPADLHKAKPHPGLLDISKPKPNTSPEVSKHKIQRYSDSSPPPMGRLSAKV
ETSEPPRSGFKPVAARSETGGGSTSSSTKSPLIIDKNETFTVYRDPALVRSDAENSVSVS
VSSNHVAAYLHPHLHTLHSPTPHSPCLTSASHSHLLAPPHTHLLPPGVLPAMPPPTASLL
GGHPRLDSPSGLGHLALSHPASAHQQRFLQGQGPPPPSLLAQAHGGAAGLGLYPILWQYP
NGTPTSYSPGLNLPPTAKWVHSENPISLNSEGSLRRNTPSPWLHQSAGSASDGLGLLSHV
PVRPASADPHRPSIKISSHASPPLSKSSMNTHKEDPDKKGFMDPIRTLTLTQLKQEQTDQ
SRTPERKDVHLHRLYLDPHSKARLANAQDAVLAADRASKYKEENRQILKESIEVAPFTAK
IQRSSDPGMDRERCRDPAFPVRLPALASPSPKAGHIHPHIIQSEKSNYFTTLSNSVVNEP
PRLYPSKELSSYYEKVSGGAPGVVASIGAAVQSQGALSLGSYTSKASLSKPPPLIKHQPE
GGEGLAGKITEQLSQQVTLVQHQHQHHTVGMDRIERRSPAISPSSSTSSSTAPNHHHHQQ
NHQHHHHHQQQLQQQQQHHQHLHHHHHQQQQQQQQQPQQQHQQQQQQHQQQQHHQQQQQQ
QQQLRAMPSLHRAPVFHPPTQHALDRKDAAEREREKEKERERTVYGGRLSPPTLTPIQPV
SLALAGSKTSAEQQKPPTLLPELRDVKGHGSAAITSVASAISGEIMTPSVDAWRHGEMIQ
ERGGMLRAKPHSAMASVIVRPSSSVKYNSLVGANQSGAMITKELPHGGFYPASLQGEGLR
LGESLREVVTGRVIQPNSNLDEMCFQYKHSSMRDMQGTMAAGITNSVCRTAISAASLFGI
PSISGTAIPDLGYSVSAHKTGICGRVLSHSGPGEYQEGLGSRTTSPGGSLPPPSPVGTPQ
PSPSLTPTPSSIAGSSQPYSSSFVHLKKHKAALAAAQFRSNSSPAPTSVSIGNCFLPVDS
VDKTPIPNSPPPPASSQASSSSLDSSGSASGSTTTGKSSPLPNGQPPGSASTSSGQPSNY
HKLKKAWLTRHSEEDRNTTATASCASTKPEKLPSTITSTPTSTSTSNTAAMSEMIKPCTV
NLSASTSSEVELSKDSKAERERQLEDKVGGAATGGGGGEERKAAPSLRRGNKRSYESASE
SGGDDSDTSESKMEGRAKRQPKPTFKKKQNDMARRKGDNEKEDDDLKPNGIFRSAREKTK
LKLASSNGIPRSVLKDWRKVKKLKQTGESFLQDDSCAEIGPNMQKCRECRAVRSKKGEEP
THSPVFCRFYYFRRLSYSKNGVIRMDGFSNPDQFDDEALALWVPGLMDESQLDQTTAKYI
LSFIGDKFCQMVVTENTAATWIKKDAKLAWKRAVRGVREMCDACEATLFNIHWVCQKCGF
VVCLDCYKAKERRSSKDKELYGWLKCVKGQPHDHKHLMPTQIIPGTVLTDLVASMHSLRE
KHNIKPHCPCTNKQNLNTKLPATNGVSQVLQNVLNHSNKLALVKAEPGSQQNSDQVGTKV
ETNGGGRGGSSPGSDAGSSPVSPPESQSPLHFLADLAEQKSREEKKENKSVLLGKSVKED
KVGDSLEVLQQCKTTSLVANSTEQGSTLRDLLTTTAGKLKLGSTDAGMAFAPVYSTASQT
GKGVRTMPNILDDIIASVVENKIPASRQSVTTKLSIKHEPIAPGNHNNNPAPAVTEDAKP
DRKKLAQVTAAVTEDLTNQYPDIPHCWLNNGRLLWLKDHRNQNNWKLFRECWRQGQPVLV
SGIHKRLNSGLWKADSFNQEFADHQGDLLNCKDQVVSNSGIKEFWDGFEDITKRPKSKDG
EPMVYRLKDWPSGEEFMALMPSRYDDLMKNLPLPEYSDPEGNLNLASHLPSFFVRPDLGP
RLCCAYGVAASQDQDFGTANLHVEVSDVVSVLVYVGVAKGHGVLSKTGVLKRLEEEDLDE
GVRKRLKDSSETPGALWHIYLNKDMDRVREFLHKQGSDPPADQDPIREQASYLSRKQRQR
LLEEHGVQGWTVVQFLGDSVLIPAGAMHQVQNLHSCVQVINDFVSPEHVANSFNLTQELR
PSKEEVNYEDKLQVKNILYHCVKEAVSSLKRSSSEEDDEEENS
NT seq
8772 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgaggctcggccggagctggtcgggaaacggttcctctgcgtcggcggcgac
gagccgcccgaaatcggcgacattggtcggtggccgtggaggtccggggtcatacgagcc
gttaaccatcttgacagcgacaaccccgacctgacggtatacgtggagtttgacgaccag
gagtgggagaaaagggagtgggtgaaggtctatgaggatttccagctgtttctcctggag
caccagctggtctgggccaagaggaaggagggagcaggaggagcaggagcaggggcagga
ctgcttcagggaaccaaggccaaacacatacagtggcctgccctggcgtttaagcttgtg
gtggggaagagcctgttgtcgtcggtaacagctgtggaattcttcttggaccgacagctg
gacttcctgtctgaccattcagcctttcagccataccaggatgaggtggacagtctgagc
ccagtgttgagagacaaccatcagctccatgaagaagtgaggggctggctcaaagaccaa
aaggtgcaggagatttttatgcaaggtccctattcattgaatggctaccgcgtgcgagtg
tacagacaggactcggccacccagtggttcactggcatcatcacacaccacgacctcttc
agtcgaaacatggtcgttatgaatgaccaggtgctagaacctcagaacgtggatccatcc
atgatccagatgacctttctggacgacgtggtccactctctactgaaaggagaaaacatc
ggcatcacttccagacggcggtcacgatccagtcagaacaacaactctacccatatgacg
ggagggagacctagcgggaccaccggcagcactcagagtcattacactcgagcccaagcc
aacagcccccgccctatcatgacctcatcaggccctaacccaaagggctcccaggggaca
ccggcctctcagcagcagcccgccagccaatcgcaccactcacccggcggcagtgggagg
gagcagagagagcagcgcaacgctcgctcatccaggaggaaaggatcggacagcagtgtt
ccagaggaggagaaggagcgcagggaagagagcacagcgagagactccaagtcaaaggcc
aaacagtctgtgaacaaacgcaggaaggttgaggaagatgagaaaaaggcgggtctaaaa
aggctgaagactgatatgacctctgacctgtcggagagcagtgactctgaaaacccacac
aacaagagaaccgctcactcctcatgctcctcctcctcctcttcgtcctcatcgtcctcc
tcctcctcctcatcctcctcctcggagcctaactctgagaatgagcttaagtctcgcggc
agtgatgtcaagcaaagtggcgtttccaaaaaggaggaggagcttcagccggtaatacag
ggcaccaaaataaacaattcctcttctgctattggtcgcctgtccccttgggcggagctt
cagtcagcagaggacagcaagaagggagtggccaaggacacaggaaacatttcaaccaag
gaggaggaggagttggtagcggtgacgcaaattactcagtctccacggcaacagacaact
ccgatctcagatccggtccaggcgggcattgtggatagcagcaagagcaccgtgaaagtg
tcgtctcgatcccagacaccatcttcccaacttggcggcggctgtgtgatcgacattacg
gatgaggctcaggccacggtgcaccaggagagttcagaggctgtgtcagcactgctggct
tcgcagaaggcagagtccacagccctctccccctacctccccctcaacccctctcccgtc
tcttcgccgcccgtccctcagtctccctcgccatcggaaggaggccgcagggcggataat
gagcctccaatgcacccgcacggcattctgggaggtggcatggcagcagccaggagccta
agcaacaagatggagtttgcgccctctgaggtcatcaggcccgtcacatccatagttgac
aatgtcgtgcttgtggagaaggagaaaacatccctccctcatcatcatcatcatcatcat
caaccaccacaacaacaacagcaacagcagcagcagcatgcacaacactacacatccatc
caccctggcattaagagcccgtctctgtctgaggagacaagaaaacacccactacagcaa
ccgcccccccacaagatgaacactgtccacccccctgaactagccagatccagaataagc
cccaacacagccccaacacagctcaacaccctcaaacagaaaccccagcaccccaacaac
tctcagagccatccctaccccaacactaatccagctgatttacacaaggctaaaccccac
ccgggcctgctggacatatctaagcccaaacccaacacctccccagaggtctctaagcat
aaaatacagaggtactctgactcctccccgcctccgatgggccgtttgtcagccaaagta
gaaacatcagaacctccgcggtccggtttcaagccagtggcggcacggtcggagacgggc
ggaggcagtacgagcagcagcaccaagagccctctgatcatcgataagaacgagaccttc
accgtgtacagggacccagctctggtccgctcagatgcagagaactctgtctccgtctct
gtgtcctccaaccacgtggcagcctatctccatccccacctgcacaccctccactccccc
actcctcactccccctgcctcacctctgcctcccactcccacctcctcgctcctcctcac
acgcacctgttaccgcctggggtgctcccagctatgcctcctcccacggcctccctcctc
gggggccaccctcggctcgactcccccagcgggctgggtcaccttgccctatctcacccg
gcatcagcgcaccagcagcggtttctacagggtcagggcccccctccaccctctctacta
gcccaggctcacggcggcgcagcagggctgggcctttaccccatcctctggcagtacccc
aacggaacgccgacctcctactccccggggctcaacctgccccccacagccaagtgggtc
cactctgaaaaccccatcagcttgaattccgagggctcactcaggaggaacacacccagt
ccgtggctccatcagtccgccggcagcgccagtgacggtctgggtttgctgagccacgtt
cctgttcggccagcaagtgccgacccccacaggccctcgatcaagatcagcagtcacgca
agccctccgctgtctaagagcagcatgaacactcataaagaagatccggataaaaaaggt
tttatggacccgatcaggacgttgacactgacccagctgaagcaggagcagacggaccag
agtcgaacccccgaaaggaaagatgtccacctccaccgcctctacctagacccccacagc
aaggcacgcctggcaaacgcacaggatgcagttctggcagcagaccgagccagtaaatac
aaagaggagaatcgtcaaatcctaaaagagagcattgaggtcgctcccttcaccgccaag
atccagcgctccagtgaccctggaatggacagagagaggtgcagggatccagcctttccc
gtcaggttaccggctcttgcctccccaagccccaaggccggccacatccatccccacatc
atccaatcagaaaagagcaactacttcaccactctgtccaacagcgtggtgaatgagcct
ccaagactctacccctccaaggagctcagctcttactatgagaaagtgtctggcggagct
ccaggggttgtggccagcatcggggctgccgtgcaaagccagggagctctgtccctgggc
agctacacctccaaagcctccctgtcaaagccccctcccctcattaagcaccaaccagag
ggaggagagggtttagcagggaaaatcactgagcagctcagccagcaggtgacactagtc
caacaccaacatcagcaccacacagttggtatggacaggatagaacgccgcagccccgcc
atttcaccctcctcctccacatcttcctccacagcacccaatcaccaccaccaccaacaa
aatcaccaacaccatcaccaccatcaacaacaattacaacaacaacaacaacaccaccaa
cacctccaccaccaccaccaccaacaacaacaacaacaacagcagcagccgcagcaacaa
catcagcagcagcagcaacaacatcagcagcaacaacatcaccagcagcagcagcagcag
cagcagcagctcagggcaatgccatctctccaccgagcgcctgtcttccatccgcccacc
cagcacgcattggatcgcaaggacgctgcagagcgagagagggagaaggagaaagagagg
gagaggaccgtttatggcggacgcctgtctccaccaaccctcacgcccattcagccagtt
agcttagcgttagcgggtagcaaaacgtcagcggagcagcagaagccccccacactgctg
ccggaactcagggacgttaaaggtcatggaagtgctgccatcacctccgtagcctcagcc
attagtggggagatcatgactccgtccgtggacgcatggaggcacggagagatgattcag
gaaagagggggaatgttgagggccaagccccattccgcgatggcatcagtcatcgtgcgt
ccgtcgtcatccgtcaaatacaacagtcttgttggtgctaaccaatctggtgctatgatc
actaaggagctcccccacggggggttctacccagccagtcttcagggggagggtctaaga
ctgggggagagtctgagagaagtggtaaccggcagggttatccaacccaactcgaacctg
gacgaaatgtgtttccagtataaacattcttctatgcgtgacatgcagggaactatggca
gccggcatcacaaactctgtgtgcaggactgccatttcagcggcatccctttttgggata
ccgagtattagtgggacagccatccctgatttgggctactctgtctcagcacataaaact
ggcatttgtggcagagtgctgagccactcaggaccaggagagtaccaggaggggctaggc
tcacgcaccacatctccaggggggtctctgcctccccctagtccagtagggacaccccag
cccagtccaagcctcaccccgacacccagctccattgctggctctagtcagccgtactcc
tcctcctttgtccaccttaagaagcacaaagctgccttggctgcagcccaattcagaagc
aactcctcccctgcgcccacatccgtctcaatcggaaactgcttcctacctgtggattcg
gttgacaaaactcccattcccaactctccccctcctcccgcgtccagccaagcctcgtcg
tcttcgctcgatagcagcggctcggccagcggcagtacaacgacaggcaagtccagtccc
ctgcccaacggccagcccccgggatcggcctcgacaagcagcgggcaacccagcaactac
cacaagctgaagaaggcctggctaacccggcactctgaggaggacaggaacacaaccgct
actgcaagctgcgccagtacaaagcctgagaaactgcccagcaccatcaccagcacgccc
accagcaccagcacaagtaacaccgcagccatgtcagagatgatcaaaccctgcacagtc
aatctcagcgcctccacctccagcgaggtggagctgagcaaagacagcaaagcggagaga
gagaggcagctggaggacaaggttggaggagcagccacagggggaggaggaggggaggag
aggaaggcagctccctcattaaggcgggggaacaagcggtcatatgagtcggcttcagag
agcgggggagacgactccgacaccagtgaaagcaagatggagggccgagccaagcgccag
cctaaacccaccttcaagaagaagcagaatgatatggccagaaggaaaggagacaacgaa
aaagaggacgacgacctgaagcccaatggcatcttccgatctgcccgagagaagacgaaa
ctcaaactagccagcagcaatgggatcccccgctccgtcctgaaggactggagaaaggtg
aagaagctgaagcagacgggggagtcgttcctgcaggacgactcgtgtgccgagatcggg
cccaacatgcagaagtgtcgggagtgcagagcggtgcgcagcaagaagggagaggagccc
acgcattcccccgtcttctgtcgcttctactacttcagacggctctcctacagtaaaaac
ggagtcatccgaatggacggcttctccaatccggaccagtttgacgacgaggccctggcc
ctttgggtccccgggttgatggacgagagccaactggaccagaccacagccaaatacatt
ctcagcttcataggagacaagttctgtcagatggttgtgacggagaacaccgccgccact
tggatcaagaaggatgccaaattggcgtggaagcgcgcggtgaggggggtgagggagatg
tgcgacgcctgcgaggcgacgctcttcaacatccactgggtgtgtcagaagtgtggcttt
gttgtctgcttggactgctacaaggccaaggagagaaggagctccaaagataaagaactc
tacggctggctgaagtgtgtgaaaggccaaccccacgaccacaaacaccttatgcccacg
cagatcatacctggcacagtgctgacagacttggtggcttccatgcactctctgagagaa
aagcacaacatcaaaccacactgtccctgcaccaacaagcagaacctcaataccaagcta
ccagccaccaatggagtgtcacaggttctgcagaacgtcctgaaccacagcaacaaactg
gctctggtgaaggctgagccgggctctcagcagaactctgaccaagtaggaactaaggtg
gagaccaacggaggaggcagagggggaagcagtccaggcagtgacgcaggaagttctcct
gtcagtcctcccgaatcccagtcacctctgcacttcctggctgacctggcagagcaaaaa
tccagggaggaaaagaaagaaaacaagtctgtgctactgggtaaatcagtgaaggaagac
aaggtgggggacagcttggaggttctgcagcagtgtaaaaccacctcactggtggccaac
agtacggagcagggctccacactcagagacctgcttaccaccacagcagggaagctgaag
ctgggctctactgacgcaggaatggcctttgcaccggtctactctactgcgtcacagact
ggaaaaggtgtgaggaccatgccaaatatccttgacgacatcattgcttctgtggttgag
aacaaaatccctgccagccggcagagcgtcaccaccaaactgtcaatcaagcatgagccc
atcgccccgggcaaccacaacaacaaccccgcccctgccgtcactgaggacgccaaacca
gaccggaagaagttggcgcaggttactgctgcagtgacagaagatttgaccaatcagtat
ccagatattcctcactgctggttaaacaacggacggttgctgtggctcaaagatcaccgt
aaccagaacaactggaagctgttcagagagtgctggagacaaggacagcccgtgttggtg
tcagggatccataagcgactcaacagcggactgtggaaagctgactccttcaaccaggag
tttgcagatcatcagggagaccttctcaactgtaaagaccaagtggtgtccaactctggt
atcaaggaattctgggatggatttgaggatatcactaagcggcccaagtccaaagatgga
gaaccgatggtctacagactaaaggactggccgtctggggaggaattcatggccctcatg
ccttccagatatgatgacttgatgaagaacctgcctctgccagagtactctgatccagag
ggcaacctaaacctggcctcccacctgccatctttctttgtccggcccgatctgggaccc
agactgtgctgtgcctacggtgtagctgcgtctcaggaccaggacttcgggactgccaac
ctgcacgttgaagtttccgatgtcgtctccgttctagtctatgtaggagtggccaaaggc
cacggagtcttgtccaaaacgggagtgttgaagcgtctggaggaggaggatctcgacgag
ggggtccgaaagaggctcaaagactcgagcgagacaccgggggctctgtggcacatctac
ctcaacaaggacatggacagagtccgagagttcctgcacaagcagggatcggaccctccg
gcagaccaggacccaatcagagagcaggcctcgtacctgagcaggaagcagcgccaacgc
ctgctggaggagcacggcgtccagggctggactgtggttcaattcctgggagactcggta
ctcataccagccggggccatgcaccaggtccagaacctccacagctgtgtccaggtcatc
aacgactttgtgtctcccgagcacgtggccaactccttcaacctgacccaggagctgcga
cccagtaaagaggaggtcaactatgaggataaactacaggtgaagaacattctgtaccac
tgtgtgaaggaggcggtgagctccctaaagaggagcagctctgaggaagacgatgaggaa
gagaactcatga
DBGET
integrated database retrieval system
