Pungitius pungitius (ninespine stickleback): 119212485
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Entry
119212485 CDS
T07626
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119212485 (vps35l)
Membrane trafficking [BR:
ppug04131
]
Protein recycling
Others
Retriever complex
119212485 (vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
DUF5667
Motif
Other DBs
NCBI-GeneID:
119212485
NCBI-ProteinID:
XP_037318816
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All DBs
Position
21:complement(15366760..15374627)
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AA seq
968 aa
AA seq
DB search
MAAVQWRSSVRNYHSELQRCRPEAALVDFGDYHPLKPIMVTDTKTRRGARKGSTSSSSSS
SSSVPPDPLSSMLDGTDPLSMFAAASATEAPAMPHSASTADLGKKRREKEEEAVGQDFEP
WSSKRGDILARFTTTERLSINLFMGSDQGKAPSPGSSAVSEKVRTRLEELDDLEEGSQKE
LLNLSQQDYANRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLIT
DILDTFGRLVYDRIWTMCSDPQPLPDSFTVDDVNDTAKETCLNWFFKIASIRELLPRLYV
ETAILKCNRFLNKGGIQETLPRLTAMIRGIGDPLVAAYARAYLCRVGLEVAPHLKDSLNR
NFFDLLAAFRQIGSESVQNQLVLQRVEVPEYLTLYSPAINWILQCIAYRAPEPLLTEMME
RCKKLGNNSLLLNSVMRAFRPEFVAARATDFIGMIKESDEAGFPKHLLFGSLGRSLTCAD
PPESERLTILNEAWKVVTKVRSPQDYVNCAEIWVEFTCRHFSKREINTVLADIIKHMTPD
RAFEDAYPQLQSVIGKVLAYCHDFSVLFSMERFLPFLDMFQKDSVRVEVCRSIMEIFIRH
QKEPTRDPVILNAMLHICKTMHDSVNALTLEDEKRSLALLIIGFIRMVSFGRDFEQQLSF
CVEARATFCNLEPVLVQLIHTVNQLAMETCRVMRGGHSRKTAAFVRACAAYSFITIPSLS
SILSRLGLYLLSGQVALANQCLSQADAFLNTAVSLLPEVPRSISVEGKLRSSESFLLDFI
NNFLATLLVVPDHPEHGVLYLVRDLLNKVQNYTWEDNSDAKVRVYISALPLLAAMSQETF
HYSIPKVDSNETLYGGDPKFLSEINKLCETLIGQILDNLKALSRDEQSTRRQGALAFSLF
GVLLAHGDLRDSKLSQLVVNLWNLSHKHGCRDTRVSVRTLEYIKHQAQQADMAHLSDTVQ
RLALQSRT
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggtgcagtggagatccagcgtacgcaactatcacagcgagctgcagagatgt
cgtcccgaggctgctctggtggactttggagactatcatcccctcaaacccatcatggtg
actgatacaaagacccggcgcggggctcgtaaaggcagcacctcctcgtcatcctcctct
tcctcctcggtgcctccggaccccctcagctccatgctggacgggaccgaccccctctcc
atgtttgcagccgcctcggccactgaggctcccgccatgccgcacagcgcctccactgcg
gatctggggaagaagagaagggagaaggaggaagaggcggttggacaagactttgagccc
tggtcgtcaaagcgtggggacatcctggccagattcaccaccactgagaggctctccatt
aacctttttatgggttcagaccaaggaaaagctccaagtccaggatcctccgctgtttca
gagaaggttcgaacccgcctggaggagctggatgatctggaggagggttctcagaaagag
ctgctgaacctctcccagcaggattacgccaaccgcatcgaggagctgaaccagtccctg
aaggaggcctgggcctcggaccagaaggtcaaagccctgaagatcgtcatccagtgctcg
aagcttctgtccgacacctctgtgatccagttctacccaagcaagtttgtcctcatcacg
gatatcctcgacactttcggccggctggtgtacgacagaatctggaccatgtgctcagac
ccgcaacctctaccagactcgttcacagtggatgacgtgaacgacacggccaaggagacg
tgcctcaactggttcttcaagatcgcgtccatcagggagctcctgcccagactatacgtg
gagaccgccattctcaagtgcaaccgcttcctcaacaaaggcggtattcaggagacgctc
cctcggttgacagccatgatcagagggatcggagaccccctggtggcggcgtacgccagg
gcctacctctgcagggtgggcctggaagtcgccccccacctgaaggacagcctgaaccgc
aacttcttcgacctgctggccgccttccggcagatcggcagcgagagcgtccagaaccag
ctggtcctgcagcgggtggaggtgcccgagtacctgacgctttattcgcccgccatcaac
tggatcctgcagtgcatcgcctacagagcgccagagcctctgctaacggagatgatggag
agatgcaagaagctggggaacaattctttgctgctgaattcggtcatgagggccttcagg
ccagagtttgtcgcagccagagccaccgacttcatcggtatgatcaaagagagcgacgag
gccggcttcccaaagcatctgttgttcggctctctgggtcgcagtctgacctgcgccgac
cctccagaatccgagaggctgacgatccttaacgaagcctggaaggtggtcacgaaggtc
cgaagtcctcaggattacgtcaactgtgccgagatctgggtggagttcacttgccgacac
ttctccaaacgggagatcaacaccgtcctggctgacatcatcaaacacatgacccccgac
cgggccttcgaggacgcttaccctcagctgcagtcagtcatcgggaaggtcctcgcctac
tgccatgacttctccgtcctcttctccatggagcgcttcctgccgtttctcgacatgttc
cagaaggacagtgtgagggtggaggtgtgcagatccatcatggagatcttcatcagacac
cagaaggagcccacgagagacccggtcatccttaacgccatgttgcacatctgcaagacc
atgcacgactctgtcaacgctctcactcttgaggatgagaaaagatctttggctctgctg
atcatcggcttcatccgcatggtttcgtttggtcgagactttgagcagcagttgagcttc
tgcgtggaggcccgagccaccttctgtaacctggagcccgtgctggtgcagctcattcac
accgtcaaccagctggcgatggagacctgcagggtgatgagaggaggccactcgcgcaaa
acggcggccttcgtcagggcgtgcgctgcctacagcttcatcaccatcccgtctctcagc
agcattctcagccgtctcggcctttatttgctctctggccaggtcgcgttggccaatcag
tgtctttctcaggcggacgctttcctaaacacagccgtcagtcttcttccggaggtccct
cgctccatcagcgtggagggcaaactccgctcctctgagagcttcctgctggacttcatc
aacaacttcctggccacgctgctggttgtcccggaccatccagagcatggcgtcctctac
ctagtccgcgatttgctcaacaaggtccagaattacacctgggaggacaacagcgacgcc
aaggtgcgggtctacatcagcgctctgcccctgctggctgccatgagccaagaaaccttc
cactactccatccctaaagtggactccaacgagacactttatggaggagaccccaagttt
ctatcggagatcaacaagttgtgcgagactctaatcggacagatcctggacaacctgaag
gccctctctcgggacgagcagagtacgcggcgccaaggtgccttggccttttccctgttc
ggggtcctgctggctcatggtgacctgagagacagcaagctgagccagctggtcgtcaac
ctgtggaacctcagccacaaacacggatgccgtgacacccgagtctctgtccgaaccctc
gagtacatcaaacaccaggctcagcaggccgacatggcccacctgtccgatacagtgcag
aggctggcccttcagtcccgcacctga
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