Pungitius pungitius (ninespine stickleback): 119212492
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Entry
119212492 CDS
T07626
Symbol
si:ch211-141o9.10
Name
(RefSeq) probable endonuclease 4
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119212492 (si:ch211-141o9.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119212492 (si:ch211-141o9.10)
Enzymes [BR:
ppug01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
119212492 (si:ch211-141o9.10)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
119212492 (si:ch211-141o9.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
119212492
NCBI-ProteinID:
XP_037318834
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All DBs
Position
21:complement(15623254..15626681)
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AA seq
293 aa
AA seq
DB search
MRDRRKKNRANKKYIGAHVSIQGGMWRAVGSCAEMGGNCFGLFLGSQRSWKRPPLDHTAA
DKFREQCSLWEYDPAHVLPHGSYLMNCGSPKEDVFEKSQALLVDELSRCSLLGLNLYNFH
PGSSLGSITTEQCVEKIASAINRAHQQTPAVVTVLENMSGQGNTVGGKFSELRSIIDKVR
DQTRVGVCLDTCHAFAEGYDVAAEGGVKAMLDVFEQEVGLQYLKALHLNDSKGRLGCNLD
RHEDIGKGHIGISAFRDIVNEPRLDNIPLVLETPGRPGFQYAEQIELLYSLHE
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagggaccggaggaagaagaaccgggcgaataagaagtacatcggagctcatgtgagc
attcaaggtgggatgtggagagccgtggggtcctgcgcagagatggggggcaattgtttc
ggcctgtttctgggctcccagcggtcatggaagaggcctccactggaccacacagctgca
gacaagtttagggagcaatgctccctgtgggagtatgacccagcacatgtcctgccccac
gggtcctacttgatgaactgtggatctcctaaagaggatgtgtttgagaagagccaggcc
ctgttggtggatgagctcagccgctgcagcctgctgggcctcaacctctacaacttccac
cccggctcctccctgggctccatcaccaccgagcagtgtgtggagaagatagccagtgcc
attaaccgagctcaccaacaaacacctgctgtggttacagtgttggagaacatgagcggt
cagggcaacacggtgggcggcaagttctccgagctgaggagcatcatcgacaaagtgaga
gaccagaccagagtaggcgtgtgtctggatacctgtcacgccttcgcagagggatacgat
gtggctgcggagggaggggtgaaggcgatgctcgacgtgtttgagcaggaagtcggactc
caatatctcaaagccctccatctgaatgactccaaagggcggctgggctgcaacctcgat
cgccacgaagacatcggcaaaggtcacatcggaatctcggctttccgagacatcgtcaac
gagcccaggctggacaacatccccctcgtactggagacacctggacggccgggtttccag
tatgctgagcagattgaacttctctactccctccacgagtga
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