Pungitius pungitius (ninespine stickleback): 119212507
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Entry
119212507 CDS
T07626
Symbol
dhx32a
Name
(RefSeq) DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32a isoform X1
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppug03041
]
119212507 (dhx32a)
Enzymes [BR:
ppug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119212507 (dhx32a)
Spliceosome [BR:
ppug03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119212507 (dhx32a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
119212507
NCBI-ProteinID:
XP_037318859
LinkDB
All DBs
Position
21:complement(6416745..6423045)
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AA seq
732 aa
AA seq
DB search
MSDERICPESEECAAEDPFGFGDELELNPFDGLPFSSRYYKLLKERQALSVWKVRCEFQE
ALLNNQLVVVSGTANTGRSTQIPQWSAEFCLSAKYRHGMVVCTQSIGQSAVDLALRVADE
MDVNIGHEVGYTIPLENCCSADTILRYCTDHMLLREMMSDPFLEHYGVVVIDQAHERTVS
TDILLGLLKDILLQRSGLRVVILAVPPATDKLVSHYDGVPLIRLEALSPAEDVHSDSGNK
DYFFSALRLVLEIHRTKEEGDVVVFLASADEVHCAHSILQREGTRLGAELGRMVPLVLCP
RRGGLPPEPPGSRKSRRVFLSTKHGEDMWWATESVNFVIDTGVQKKMVYNPRIRANSEVL
QPISQYQADVRRRLSGPTGKCFCLYQEDGQLPAENPAQILESNITPTVLFLKRMEIAGLG
QCDFIERPDPEGLMQALEELDYLAALDNDGNLSEIGIIMSEIPLDPQMAKALLASCEFDC
VSEMLTIAAMLTATSCFLEPPAGRGHEAVQCHRKFQHPEGDHFTLINIYNAFKRSQREQY
FTAEKWCQDYFLDHSALKEAEAIRSELTDTLNRIELPISEPFFGTKTNTHNVKRALLAGF
FMQIARDVDGSGNYFILTHKHMAQVHPLSGYGPQSHKLGLPEWVVFHEYTLSQNNCMRTV
SEISPQVYIQMAPMYFFYNLPPSESKDILQDMLDPEGSRNCQDGKQEASTIGGEVDVGCA
VVSQSYDRCVIQ
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgaaagaatttgcccggaaagtgaggaatgtgccgcggaggacccgtttggc
ttcggggatgagctggagttaaatccattcgatggcttgccattttcctcccgttactac
aagctgctaaaagagaggcaggctctgtccgtgtggaaggtcaggtgcgagttccaagag
gctctgcttaacaaccaactggttgttgtgtccgggacagcgaacactgggaggagcacg
cagatccctcagtggtctgccgagttctgcctctctgccaagtaccggcacggcatggtc
gtgtgcacgcagagcatcgggcagagcgccgtggatctggccttgcgcgtggccgacgaa
atggacgtcaacataggccacgaggtgggctacaccatccctctggagaactgctgctcc
gcggacactatcctgaggtactgcaccgaccacatgctgctgcgagagatgatgtcggac
ccttttttggagcactacggggtcgtcgtcatcgaccaggcccacgaaaggacagtcagc
acggacatactgctgggtctcctaaaggacatcctgctgcagaggtctgggctcagagtg
gtgatcctcgccgtcccgcccgcgaccgacaagctggtgagccactacgacggcgtcccg
ctcatcaggctggaggccttgtcgcccgctgaggacgtccacagcgacagcggcaacaag
gactacttcttctccgcgctgagactggtgctggagatccaccgaaccaaagaggaggga
gatgttgtcgtgtttttggcctccgccgacgaggtccattgtgcccacagcatcctgcag
agagaaggcaccaggctgggagccgagctcggccggatggttcctctggtgctgtgcccc
cggcggggagggctaccgcctgagccaccgggctccaggaagtccaggagggttttcctc
tctaccaaacacggggaggacatgtggtgggccacagagtcggtcaactttgtcatcgac
acaggagtccagaagaagatggtgtacaatccaagaataagagctaactcagaggttctt
caacccatcagtcaatatcaggcagacgtacgcaggcggctctctggaccaacaggcaaa
tgtttctgcctgtatcaagaagacggacagcttcctgcagagaaccccgcacagattttg
gagtccaacattactccaacagtccttttcctaaaaaggatggagatagccggcctggga
cagtgtgatttcatagagagaccagatcctgagggtctcatgcaggcgctggaggagctt
gattacctcgcagctttagacaatgatggcaacttgtctgagattggcatcatcatgtct
gagatccccctggaccctcagatggccaaagcgctgctggcatcttgcgagtttgactgc
gtgagcgagatgttgacaatcgcagcaatgcttacagccacgagctgcttcctggagcca
cctgctggtaggggccacgaggcggtccagtgtcacaggaagttccagcaccctgaaggc
gatcacttcaccctcatcaacatctacaatgccttcaaacgaagccagagagaacaatac
ttcactgctgaaaagtggtgccaggactatttccttgatcattccgccctgaaggaagca
gaggccattagatcagagttgaccgacaccctgaacaggatcgagcttccaatctccgag
ccgttctttggaaccaaaaccaacacccacaacgtcaaaagagctctgctggctggtttc
ttcatgcagattgcacgagacgtggacggatccggaaactacttcattctgacacacaag
cacatggctcaggtgcatcccctgtctggctacgggcctcagtcacacaagctggggctg
ccagagtgggtcgttttccacgagtacaccctgtcccaaaacaactgcatgagaacagtc
tctgaaatctctccccaagtgtacattcaaatggctcccatgtacttcttctacaatctg
cctcccagtgaaagtaaagacatactacaagacatgttggacccagaaggatccagaaat
tgtcaagacgggaaacaagaggcctctacaatcggcggcgaagtcgacgtcggctgcgca
gtggtgtcccagtcctacgatagatgtgtgattcaatga
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