Pungitius pungitius (ninespine stickleback): 119212520
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Entry
119212520 CDS
T07626
Name
(RefSeq) rho GTPase-activating protein 23-like isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119212520
Membrane trafficking [BR:
ppug04131
]
Endosome - Golgi transport
Others
Others
119212520
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
119212520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
PDZ_6
PH_9
PDZ
PDZ_2
SCF
Motif
Other DBs
NCBI-GeneID:
119212520
NCBI-ProteinID:
XP_037318886
LinkDB
All DBs
Position
21:10126589..10185050
Genome browser
AA seq
1601 aa
AA seq
DB search
MLTASGVAPAPSGREWRFQCSVGVDCSDAEPRCIWLAVLRGVSPHSSPRPTTIASPRRRG
SRRSIQRHRLSWAKGRRDGMVSSNENRRRPLSSGEVEGVLWQGPRTIFVPKNSQGFGFTL
RHFIVYPPESSLHSIKDEENGNTSGRAGCQRSRLEPMDTIFVKSVKDDGPAQQAGLCTGD
RLVKVNGESILGKTYSQVIMLIQNSENILELSIMPKDEDVLQLVSAYSHDAYLKGNEPYS
GVAQNLPAPPPLCYPSTRPGSSAPPHRPPDNWHCRPGPVASSLDNRPPAATAPTPGWPGC
PVDSAAPLAPSGRNRGRSSSTINALDFHFANHNAAIASATLPPPRKSSMQASPRTHADAL
CHQALSDWYYSQADAAESMSPRHRSISQDCLAELGLGLALGPGPASTSSAEKRRRETLQF
HHQAAAASHDSYWLGGWGGVSGPGSRSCSESLLAAYAEYEHNYGRSVETLAQASALVSPL
YDPSSHGSQTLHFKEQNVPEVHQHKTTVISPITASSTVPPSSRRSGQQVAEPQTRRVKEE
ELVGYKSYSPSFTRKAGHLLQQAHSFREPGCSGPHLNWSPDSRSGSVDGEVAVVPRPQST
PAPSASMEERGRLGEDRELLSPISLSQEVVLRQKPPSGRRTPVQPARLPHYTTNVESPES
PGVEPGDGTPSPVSGGPGTNRRANGSLAQHAYNSLASIPFIDEPTGPSSDLQACYVPARS
VVSSSQAFTTLTSTPVPPTISSISPFVHLGSRDCSSIKSRRSSYLLAITTERSKSCDEGL
NTFREEGRVFSKLPKRVKSFFTDGSLESLRVQEEARSKRHSTSELGTITFSDVRKEGWLH
YKQILTEKGKKVGGGMRPWKRVFSVLRSHSLFLYKDKREAVLHGAGAGSSLDEHPPISIR
GCLIDIAYSETKRKHTLRLTTQDFCEYLLQAEDRDDMLAWIRVIRENSKTDNEEIGFSRQ
ALINKKLNDYRKHSLTGSKPDSSPKAHRMMPPFLLAKTDNTSVNRASRTEDNKASWGINL
MKKAKKTSSPKAFGVRLEDCQPAVNHKFVPLIVEMCCGVVEETGLDYTGIYRVPGNNAMV
SNLQEHLNKGMDINTAEERWQDLNVISSLLKSFFRKLPEPLFTDDKYNDFIDANRIEDAE
DRLKTMKKLLHDLPDHYHHTLKFLVGHLKKVADHCELNKMEPRNLALVFGPTLVRTSEDN
MTDMVTHMPDRYKIVETLILHHDWFFTTGELDEEEKAPEDKRDMQPVPNIDHLLSNIGRP
GMPGEASDSTTSDSLKSKLSSLSKKDLSARDFLPKSIISAVTRKRKKCLSTHVQDGSADE
DSEHEPVKTSNYGGEEGAVEEEEEDGGEEEAVEGQHAILKKDKRDKREIGAMAGETAEGK
DVLSGDEEGNRTSNGAKKESCRTTASPLNATQLCPNLFPRSHHQINATYPTTPTTSDPPS
HLRPRAPAREHSTMPLWICPTRLPSIYPSCYGTQQPDWNQSAPVRYRKTRGGRTRAISMN
MDLELGRSEERVRGWRAERVEVIRVIEGASDQHRRVGVPQGSILGPGSIQRIDPLPRRPL
LSSSSAWIDQGSPGSYPVVLRRSALDPRDKSRAWRRHTVVV
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atgctgacggcgtcaggtgtcgcaccagcaccgtctggccgagagtggcgatttcagtgt
tctgttggcgtggactgtagcgacgctgagccccgctgcatctggctggcggttctgagg
ggtgtgtcgcctcacagctcgccccgtccaaccaccatcgcatcaccaagaagacggggc
tcccggagatccatacaacgccaccgcttgtcctgggctaaaggacggagagatggcatg
gtgtcgtccaatgagaacagacgccggccactgtcgtcgggtgaggtggaaggcgtgttg
tggcagggcccgaggaccattttcgtcccgaagaactcacagggattcggcttcactctg
cgccacttcattgtctacccgcctgagtcctccctccacagcattaaggatgaagagaat
gggaacacaagtggaagagcaggttgccagcggtctcgtttggagccaatggacaccatc
tttgtgaagagcgtgaaagacgacgggcccgcgcagcaagctggactgtgtacaggggac
aggctggtgaaggttaatggcgaaagcattctgggaaaaacctactctcaagtgatcatg
ctcatccaaaacagtgaaaacattctggagctctctattatgcccaaagatgaggatgtg
ttgcagttggtaagtgcgtactcccatgatgcctacctgaaaggcaatgagccgtattca
ggcgtggcccagaacctgcctgctccgccacctctctgctacccttccaccaggcccggc
tcctccgcccccccccacagacccccggacaactggcactgccgaccgggccccgtggcc
tcctcgctggacaaccgcccccctgccgccaccgcccccacacccggctggcccgggtgt
cccgtggattccgccgccccccttgccccgtcgggccggaaccgaggtcgctcctcctcg
accatcaacgcgctggactttcactttgctaaccacaatgctgccatcgcctccgctact
ctgcctcccccgcgaaagagcagcatgcaggcctctccccgcacccacgccgacgctctg
tgccaccaggctctgtcggactggtactacagccaggccgatgccgctgagagcatgtcc
ccacgccaccgcagcatatcacaggattgtttagcggagctgggtctggggttggccctc
ggccctggtcccgcatccacaagctccgcagagaaacgcaggagggaaaccctccagttc
caccaccaggcggctgctgcatcccatgattcctattggttagggggttggggtggtgta
tcaggaccaggaagcaggtcgtgctcagagagcctcctggcagcctatgccgagtacgag
cataactacggccgttctgtggagacactggcccaagcctcagcactggtgtccccgctc
tacgatccctcctcacacggttcacaaacgttacatttcaaagagcagaacgtcccggaa
gtgcatcagcacaaaaccacggtgatctcccccatcacagcctcctccacagtgcctcct
agtagcaggcggtcaggccagcaagtagccgaacctcaaacacggcgagtcaaagaagaa
gagctggtgggctacaaaagctacagcccttctttcacgcgcaaagctggccatctcctc
cagcaggcgcactccttcagagagcccggctgcagcggcccccacctcaactggagcccc
gacagcagaagcggctccgtggacggcgaggtcgccgtggtacccaggccccagtccacc
ccggcgccgtctgcgtcgatggaggagagaggccggctgggtgaggacagggagctcctc
tcccccatctccctgagccaagaggtggtcctgaggcagaagccgccgtccggccgccga
acccctgtccagcccgctcgacttccccactacaccacaaacgtggagtccccagagtcc
ccaggagtggaacccggagatgggaccccgtctccagtgtccggggggccaggcaccaac
cgcagggctaatggtagcctggcacagcatgcttacaactccctagcctccattcccttc
atagatgagcccaccggtcctagtagtgacctacaggcctgctatgtaccagcccgctct
gttgtgtccagttcccaggccttcaccaccctcacttccacccctgtcccccccacaatc
tcctccatctccccctttgtccaccttggttctcgggactgcagcagtattaaaagtcgt
cgctcgtcttacttgctggccatcaccacagagagatccaagtcctgtgacgagggtctc
aacaccttcagggaagaaggccgcgtcttctcgaaactaccaaaaagggtcaagagcttt
ttcactgatgggtctctggagagcctgcgagtccaggaggaggcacggtccaaacgccac
tccacctccgaactgggaaccatcacctttagcgatgttcgcaaggagggctggttgcac
tacaagcagatcctcacagagaagggaaagaaagtgggaggcggcatgcgaccgtggaag
cgcgtcttttccgttctgcgctcgcattcgctcttcctctacaaggacaagcgagaggcc
gtccttcacggggcgggggcggggtctagcctggacgaacaccctccgatcagcatccgc
ggctgcctgatcgacatcgcttacagtgaaaccaagcggaagcacaccctgaggctgacc
acgcaggacttctgcgagtatctgctgcaggccgaggacagggacgacatgctggcctgg
atcagggtcatcagagagaacagcaagaccgacaacgaggagatcggcttctcaagacaa
gccctcatcaacaagaagctgaatgactacaggaaacacagtctgacaggcagcaagccg
gactcttctcccaaagcccaccgtatgatgccccccttcctcttggctaagaccgacaac
acctcagtgaaccgagcctccagaaccgaggacaataaagcgtcgtggggcatcaacctc
atgaagaaggccaagaagaccagcagtcccaaggcttttggcgtgcgactggaggactgt
cagcctgctgtcaaccataaatttgtccctctgattgtggagatgtgctgtggcgtggtg
gaggagacggggttggattacaccggtatctaccgcgtgcccggcaacaacgccatggtg
tccaaccttcaggagcatctcaacaagggcatggacatcaacacggctgaggagagatgg
caagacctgaatgtaatcagcagcctgctcaagtccttcttccgaaaactgcctgagccg
ctgttcactgatgacaaatacaacgacttcattgatgccaaccggatagaagacgcagag
gacagactgaagaccatgaagaaactgctccatgacctcccagatcactatcatcacacc
ctgaagttcctggtgggtcacctcaaaaaggtggcagatcactgtgaactgaacaagatg
gagccaaggaacctggccctggtgtttggtcccactcttgtgaggacgtcggaggacaac
atgaccgacatggtcacacacatgcctgaccgctacaagatagtggagacactcatcctg
caccacgactggttcttcactaccggagagcttgatgaggaggagaaggccccagaagat
aagcgcgacatgcagcctgtgcccaacatcgaccacctgctgtccaacatcggcaggccc
ggcatgccaggagaggcgtcagattctaccaccagcgattctcttaaatcaaagctttct
tcgctctccaagaaggacctgagtgccagggacttcctgcccaagtccatcatttccgct
gtgacccgcaaacgtaaaaaatgcctcagtacccacgtgcaggacggcagcgctgacgag
gactcggagcatgagccggtcaaaaccagcaactacgggggagaagaaggggcggtagag
gaggaggaagaggatggaggagaggaagaggcggtcgaggggcaacatgctattctgaaa
aaagacaaaagagataaaagggaaattggggcaatggctggggagacagctgagggaaaa
gatgtgttgtctggagacgaagaggggaacagaaccagcaacggcgccaaaaaggagagc
tgtcggacaacggcctcgcccttaaatgctactcaactttgtccaaacctttttccccgt
tcgcaccatcagatcaatgccacttatccaacaaccccaaccacttctgatcctccctcc
cacttgaggcctcgcgctccggccagagaacactccacaatgcctctctggatctgcccc
accaggcttcccagcatctatccatcttgttacgggacccagcagccagactggaaccag
tcggcgccagtacgctacaggaagacaagaggcgggaggacgagggccatttccatgaac
atggacctggagctgggcaggagtgaggaaagagtcagaggatggagagcagagagggtg
gaggtgatcagggtcatcgaaggagcatccgatcagcatagacgtgttggcgttcctcag
gggtcgattttgggcccgggttcaattcaacgaatagatccccttcctcgtcgccctctc
ctctcttcatcctcagcctggatagatcagggctccccaggatcttaccctgtggttctg
aggcgatcggctttggaccctcgggacaagtcaagagcgtggcgccgtcacactgtggtg
gtttga
DBGET
integrated database retrieval system
