Pungitius pungitius (ninespine stickleback): 119212587
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Entry
119212587 CDS
T07626
Name
(RefSeq) integrin alpha-M-like isoform X1
KO
K06461
integrin alpha M
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04145
Phagosome
ppug04514
Cell adhesion molecules
ppug04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119212587
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119212587
09142 Cell motility
04810 Regulation of actin cytoskeleton
119212587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119212587
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppug04147
]
119212587
04515 Cell adhesion molecules [BR:
ppug04515
]
119212587
04090 CD molecules [BR:
ppug04090
]
119212587
00536 Glycosaminoglycan binding proteins [BR:
ppug00536
]
119212587
Membrane trafficking [BR:
ppug04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
119212587
Exosome [BR:
ppug04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119212587
Cell adhesion molecules [BR:
ppug04515
]
Integrins
Integrin alpha subunits
119212587
CD molecules [BR:
ppug04090
]
Proteins
119212587
Glycosaminoglycan binding proteins [BR:
ppug00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
119212587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
119212587
NCBI-ProteinID:
XP_062415861
LinkDB
All DBs
Position
21:complement(2807023..2819082)
Genome browser
AA seq
1135 aa
AA seq
DB search
MGWIISTAVFLSGLNALLCFNIDPVAWKTLTQPAASFGYQVVQRPSDLLVSAPLAQYSPT
GRGLIYKCSTETCRRLSVPVAEFAVNMSLGLTMANDPSTQRTLACGPTIPKDCKSITMYS
GTCWQIDASDRVTGPVPSSNGECGSADIVFLLDGSGSVNNQDFQTMKTFVKNLVRSLLQA
DIKFAIVQFSTSPQIHFYFSDNLISGTASWERKVDEIRQLRGYTYTAKAIKSVVNDVFTP
TKGSRPNVNKVLIVITDGESNDRFNLPGATSLADNKKIVRFAIGVGGAFKRDKAKKELET
IASTKENVFQVESFNALEQIRQTLQAKLFSIEGSQTSGESLKLEMAQEGFSAAYVPEGIQ
MAIVGANEWKGGFLQYSMPTGLKTSSYEADIETDSYLGYSMAVAKTRSGTLTIVGAPRYQ
HRGAVMVVHQNVLRKTIDPFDWQFQSGEYFGAVVCAMDLNLDSFTDLILISAPMFMDSDG
EGRVYVCSLTGLDVECRLDSPSVLRGDVSGNERFGSSLAVLPDLNTDGLSDLAVGAPLEN
NGQGSIYIFHGEGGVGGISSSYSQRIAASEVQSPLRFFGLSISQSSFDHSGDGLPDLAIG
SKGAVVLLRSKPIVMVEATVSFSPNRIPTQNSNCSKPLESTAEVCFTMTRHSKVDKVTAK
ISYNLTLDATRKVPNNRAYFSEKQRETKGTVDIDLIRPVCNTVKFSVQACPEDALNALYN
ELRFSFEGLPNPPNPSASLALQAQKTTLHPLGFEINCGDDDKCVDDLKVDFNFTKSLEVK
VGIDELLDVTVSVENRGENSYNSRVILSYPTGLSFRKFTTLQGRIECSSLDSEDGVTRGK
TDCTVDKPILKSDSKAFFIISYGIETSSQLARSISFSANVSSGNLEHSSSSELYRNKDID
VKYSIFATFESSFSYSNFSFGKNNLHKPVQQSIVVTNDIRAVNFTVVIRVPVKLGDKNIW
TDSSSLQIPDCQKDLDEQPKVTDFIAKIQKNKLVDCSVATCSVFKCSKIMGRLESKTYQI
SANLSSEWIQQIGLQSAKFLLISTASLEYDRKQYIFLSAGSYNNPPVRKIEVEVEVYVEP
DFTKEIVGGSLGGLALLALLTAGLYKAGFFKSKYKEMINDNAADRFDDGDALTPD
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgggctggataattagtacggcagtgttcttgtcagggttaaacgctttactttgtttt
aacatcgatcctgtggcttggaagaccctgactcaacctgctgcaagttttggataccag
gtggtgcagaggccatcagatttgctggtcagtgctcctcttgcacagtattcaccaaca
ggaagaggactgatatataagtgttccaccgaaacatgcagacgactatcggttcctgtg
gctgagtttgcagtgaacatgtctctgggtttgacgatggcaaatgatccctccacacaa
agaactttggcatgtggtccaaccatcccaaaggactgcaaaagtatcaccatgtacagt
ggaacctgctggcagatagacgcttctgatcgagttacaggtcctgtaccttcttctaat
ggcgagtgcgggtcagcagacattgtatttctgttggacggctccggcagcgtaaataat
caggattttcaaacaatgaagacttttgtaaagaatctggtccgctcactcctgcaagca
gacataaagtttgccatcgttcaattctccacatctccccaaatccatttttacttcagt
gataatctgatctctggaactgcatcatgggaaagaaaagttgacgagattagacaactc
aggggatacacttacacagctaaagccatcaaatctgtggtcaatgatgttttcacacca
acaaaaggttccaggccaaatgtgaacaaagtgttgatagtcatcaccgatggagaatct
aacgaccgcttcaatttgccaggtgcaacaagtttagctgacaacaaaaagattgttcga
tttgctattggagtggggggggcattcaaaagggataaggcaaaaaaggaactggaaacc
attgcatctaccaaagaaaacgtatttcaagtggagagtttcaacgcacttgaacaaata
agacagactctgcaggccaaactcttctctattgaaggatcacaaacaagcggagaatca
ctgaaattggaaatggctcaagagggattcagtgcagcttatgtgcctgagggaattcag
atggctattgttggtgctaatgagtggaagggaggcttcctccaatactcaatgccaaca
ggcctcaagacaagctcctatgaggctgatatagagactgacagttatctgggttactcc
atggcagttgctaaaacgaggtctggcacgttaacgattgtcggtgctccaagatatcaa
cacagaggagctgtgatggtagttcaccaaaacgtcctcagaaaaacgattgatcccttt
gactggcagtttcagagtggtgaatatttcggggctgttgtttgtgcgatggacctgaat
ctcgacagcttcactgacttaatcctcatatctgcccccatgttcatggactctgatgga
gagggaagggtttacgtttgcagcttgactggtttggatgtggagtgtcgcttagactct
ccatcagtactgagaggggacgtctctggcaatgaaaggttcgggtcttctctcgctgta
cttcctgatctcaacaccgacggtctcagtgacttggcagttggagcgcctttggagaac
aacggtcaaggcagcatctacatattccacggagaaggaggagtaggaggaatcagttct
tcttactcacagagaattgcagcatctgaagtccagtcaccattgaggttcttcggcctg
tccatcagtcagtcgtcttttgaccacagtggtgacgggctgcctgacttagcgatcggt
tcaaagggcgcagttgtcttactgagatcaaagccaatagttatggtggaagctacagtg
tcgttcagcccaaatcgaatcccaactcaaaactcaaactgctcaaaacctttggagagc
acagcagaagtctgttttaccatgaccaggcactccaaagtagacaaagttacagcaaag
attagctacaatctaacactggacgccactcgcaaagtcccaaacaaccgggcctacttt
agcgagaaacaacgagagacaaaagggacagttgatattgacttaattcggcctgtatgc
aacacggtgaagttctctgttcaggcttgtccagaggatgctctaaacgcactttacaat
gaactcagatttagctttgaaggtttacctaaccccccaaatccaagtgctagtctcgcc
ctgcaggcgcagaaaacaactctacatcctttggggtttgagatcaattgcggcgacgac
gataaatgtgttgatgacctaaaagtggatttcaacttcaccaaatccttagaggtgaaa
gtgggcattgatgaactgttggatgtcaccgtctcagtggagaacagaggggaaaactcc
tacaacagccgtgtcattctctcatatccaaccggactctctttcaggaagtttacaacc
ctgcaggggagaattgagtgcagctccttggacagtgaagatggtgtaacgagagggaag
acggactgcactgtcgacaagcctattttaaagagtgactctaaggctttcttcatcatc
tcctatgggattgagactagtagccaacttgccaggagcatttctttctctgcaaatgtt
tccagtgggaatctggagcactccagttcaagcgaactctacagaaacaaagacattgat
gtgaagtacagcatttttgctacttttgaaagttccttcagctacagcaatttttcattc
ggcaagaataatcttcacaaaccagtccaacaatccattgtggttacaaatgacatcaga
gcagtgaatttcacggtggtgattcgggtgcctgtgaagctcggtgataaaaacatctgg
acggattccagcagcttgcagattccggactgtcaaaaagaccttgatgaacaacctaaa
gtcacggattttattgctaagatacagaaaaacaagttagtggactgctctgtagccacg
tgctcggttttcaagtgcagtaagatcatgggaagactggagagtaaaacctaccaaatc
tctgccaacctcagttctgaatggattcagcagattggacttcaatctgccaaattcctc
ttgatcagcacggccagtctggagtacgacagaaagcagtacatctttttatcagcaggg
tcttacaacaacccccctgttcgcaagattgaggtggaggtagaagtgtatgttgaacca
gacttcaccaaagagattgttggaggatcactgggagggttagctctcctggctttactc
accgctggcctgtacaaggctggattcttcaagagtaaatacaaagaaatgattaacgat
aatgcagcagatcggttcgatgatggagacgcactcacaccagattaa
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integrated database retrieval system
