Pungitius pungitius (ninespine stickleback): 119212589
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Entry
119212589 CDS
T07626
Symbol
nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3 isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ppug04054
]
119212589 (nlrc3)
Pattern recognition receptors [BR:
ppug04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119212589 (nlrc3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
CARD
AAA_16
AAA_33
Ferritin_2
LRR_12
Motif
Other DBs
NCBI-GeneID:
119212589
NCBI-ProteinID:
XP_037319061
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All DBs
Position
21:complement(2003850..2014068)
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AA seq
1134 aa
AA seq
DB search
MEREALYDSILDRSKRITWQDDCYVDLQSASGSAASQAETKDLHWIQKHQDLLQRFCTTS
FLEVMLAHLRKVDAVSPAEETKIRAPTRTHDQVNMLTTVVTGKGAQSSDALRGFIESSDS
LVAQLVINHDAMVKEHKEVLLRRYEQSRDRDSVSCPKLSVCSRTLLLVDGLSDIQQKEHD
LMQVGATRGRKRNHLRQLGLTKLLEPLTRVSLPPRVSLTVGVAGIGKTTWVRHFVRQWSQ
GALCADVSFVLPFAFCELNSVEKVSAEKLVKLAFPHLTDPGVVLSSSCRTLLILDGLDEF
RCAANFSDAAPCSDPKKEVSIDDLVTNIIRGNLLPDAAVWVTCRPGVASLIPGGLVDRVT
EIPGFSPQDIRLFLDHHFSERDLASRIWAHLESHKILMVMCYIPSVCWIVADTLVYIMRS
ETDESLPRTLTELYAHFCSMKSEAGEPRGREPVKVEQLHGSNRKLLGNLGRLAFYGLLKR
KYTFSEQDLRAYGVDLLLGQGSLGAGVLVREELAICTTYRFTHLTLQEFLAATFYHVSSK
RAIFDLFSESTMSWPKIGFQNHFRSAFQHSQQAEDGHLDVFVRFLAGLLSPAALKPLAGL
LAVGKDEGNQKAFAAGFLQGLLVSGGAVVSLRAVNLAYCLHELQHAELLRSVEEDLQLGS
LAGKLTRAHCVVLGYLLHVSPECSEQTNLTGSLNYATVKCLLPQLLYCSYLRLENNHFKD
DVMELLGSLLSAKDCHIQKMSLAENNIGNKGAKALSRALLANRTLTSLNLRNNNIGSKGT
KFLAEALKMNQVLVSVNFQNNAIEEEGAQALAEVLHCNRKLVSLNIRKNTIGAGGAKRIA
EALKTNRTLTKLILCSNQLGDKGAIALAEALAVNHTLLSLQLQSNSISNKGMTALTKALR
LNRGLVSLNLRENSIGVEGAKNMAHALHENNCLQELDLTANLLHDEGVQAIAGAIKFNRG
LTSLHLQWNFIKSSATKALAQALLSNGTMQLLDLQENAIGNEGVIFLAEALKTNASLRTL
CLQGVSASTSGAIAMAEALTANRTLQTLDLRGNTVGMEGAKALANALKINRSLKSLNLQE
NSLGMDGAIFIATALKGNHQLTYINLQGNGIGESGAKVISDAIRASASGCVVDI
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggagagggaggccctctacgattcaatcctggaccgaagcaaacgcatcacgtggcag
gacgactgctacgtggatcttcagtccgcgtccggctcggccgcttcgcaagcagaaacc
aaggatcttcactggatccaaaagcatcaagacctgctgcaacgcttctgtacgacctcc
ttcctggaggtgatgttggcccacctgagaaaggtggatgcggtgagtccggccgaggag
acaaagatcagggcaccgacgcgcacccacgaccaggtcaacatgctcacaactgttgtc
accggcaagggcgctcagagctcggacgcgctgcggggcttcatcgagagctccgattct
ctggtggcccagctcgtcatcaaccacgatgccatggtgaaggagcacaaagaggtgctc
ctgcggcgatacgagcagagcagagacagggattccgtcagctgcccgaaactcagcgtc
tgctcgagaactttacttctggtcgacggactttccgacatccagcaaaaggaacacgac
ttaatgcaggtgggggccactcgaggcaggaagagaaaccacctcagacagctggggctg
accaaactcttggagcccctgacgcgggtcagtttgccgccccgggtctctctcacggtc
ggggtggccggcatcggcaagacgacctgggtccggcacttcgtccggcagtggagccaa
ggggccctctgcgccgacgtgagcttcgtcctgccgttcgctttctgcgagctgaactcg
gtggagaaagtctccgctgagaagctggtgaaactggcttttcctcatctgacggacccc
ggcgtggtcctgagcagctcctgccgcacgctgctgatactcgacggcttggacgaattc
cgctgcgccgcgaatttttccgacgcggctccttgcagcgacccgaagaaagaggtgtcc
attgacgacctggttaccaacatcatccgggggaatctgctccctgacgcggcggtgtgg
gtgacctgcaggccgggagtggcctcgctcatccctggaggtttggtcgacagggtgacc
gagatcccgggattcagcccgcaggacatccggctcttcctcgaccaccacttctccgaa
agggacctcgccagtagaatatgggcgcacttggagtcccacaaaatcctcatggtgatg
tgctacataccgagcgtctgctggatcgtggccgacacgctggtctacatcatgcgcagc
gagacggacgagagccttccgaggactctcacggagctgtacgctcacttttgctccatg
aagtcggaagcgggcgagccaagaggcagggagcctgtgaaggtggagcagctccacggg
agcaatcgcaaactgctggggaacctcggacgacttgccttttacgggctgctcaaacgc
aagtacaccttcagcgagcaggacctcagggcctatggagtagatctcctgttgggtcag
ggcagtcttggtgctggagtccttgtccgggaggagttggccatatgcacaacataccgg
ttcacacatttgactctgcaggagttccttgcggccactttttaccacgtctcctccaag
cgggccatattcgacctgttctctgagagcaccatgtcctggcccaagatcggtttccag
aaccactttaggagcgcctttcagcactcgcaacaagccgaagacggtcacttggacgtg
tttgtgcgcttcctggcgggcctgctgagcccggcggcgctgaagcccctcgccgggctc
ctggccgtgggaaaagacgaggggaaccagaaggcgttcgccgcggggttcttgcagggc
ctcctggtcagcgggggtgccgtggtgtccctgcgcgcggtcaacctggcctactgctta
cacgagctgcagcacgcggagctgttgcgcagcgtcgaggaagacttgcagctcggcagc
ctggcggggaagctaacgagggcccactgcgtggtgctgggctacctcctgcacgtgtcc
cccgagtgcagcgagcagaccaacctgacgggctcgctgaactacgccacggtgaaatgt
ctgctcccgcagctgctgtactgcagctatctcaggttggagaacaatcacttcaaagat
gatgtcatggagttgctgggaagcctcctgagtgccaaagactgccatatccagaaaatg
agtttggcagagaacaacatcggaaacaaaggcgccaaagccctcagtcgcgccctcctg
gcgaaccggacactaacgtctctcaatctgcggaacaacaacattggctccaaaggtaca
aagttcctggcggaggctctgaaaatgaaccaagtcctggtatcagtcaactttcagaac
aatgcaatcgaggaggaaggtgctcaggcccttgcagaagtgctgcactgcaaccgcaaa
ctagtgtctctcaacatacggaagaatacaattggagcgggaggagccaaaaggatcgcg
gaggcgctgaagacgaaccggacgctcacaaagctgatcctttgcagtaaccagctcggg
gacaaaggcgcgatcgctctggcagaggcgttggctgtgaaccacactctgctctcactc
caacttcagagtaactcaatcagcaacaaggggatgaccgcgttgaccaaagctctccgg
ctcaaccggggcctcgtctccttgaacttaagggagaactccatcggggtggagggagca
aagaacatggcccatgcgctccatgagaacaactgtctgcaggagcttgatctcacagcc
aacctgttgcacgatgaaggggtgcaagctatagctggtgcaatcaagtttaatcgcggc
ctcacctctctgcatcttcagtggaacttcatcaagtcctctgccaccaaagcgctggcc
caagcgctcctctccaacggcaccatgcagctcctggatctacaggagaatgcaatcgga
aacgaaggcgtcatcttcctggccgaggccctgaagaccaacgcctccctgcgtacatta
tgtcttcagggagtctccgcgagcacgagtggcgccattgcgatggcggaggctctgacg
gccaaccgaaccctgcagacgttggatctgcgtggcaacactgtggggatggagggagcg
aaggccctggctaatgcgctgaagatcaaccgaagcctcaagtcgctgaaccttcaggag
aactctctgggcatggacggagccatattcattgcgacagccttgaagggaaaccaccaa
ttgacgtacatcaatttgcagggaaacggcattggagaatcgggagcgaaggtcatatct
gatgctataagagccagcgcttcgggctgtgtggtggacatctga
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