KEGG   Pungitius pungitius (ninespine stickleback): 119212612
Entry
119212612         CDS       T07626                                 
Symbol
patl2
Name
(RefSeq) protein PAT1 homolog 2 isoform X3
  KO
K24823  protein PAT1 homolog 2
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppug03019]
    119212612 (patl2)
Messenger RNA biogenesis [BR:ppug03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     119212612 (patl2)
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 119212612
NCBI-ProteinID: XP_037319126
LinkDB
Position
21:complement(3102534..3108298)
AA seq 719 aa
MSDSEQQEEADHVSQPQWPENGEAWSDGEDGTTMDCGLLQAMAEEDDEIDVYNEETFGME
LEAQGAAEDPGSGLLQFEEPPPSPPPPPCTPTPDPKPFHRHCSPSPLRPSSPQYVPWAPP
GQRGRGWGQRGGPCRGHLFEDPAVMRIVEGRPSLKTLDSAIVDLGNALYQKTFEEDYMSP
SFRKARRISGSILQDSAVVCVIDGHRGRGQHLPSNFPDFPYPVSSFRGRGEEHRGSFDRR
PFGERRPAQMHASMAPGSPIFSHQPLTPRQHYNQTGGFVFPANRPCPSTPQSLTPKMMQL
RFGANSPRPSPFYSPSSNPMQHFRNPGPVTQLHPQHKRLLNQKQHTFQRKAEDWDPYCNL
MTAKEKEWITRLQMIQLQSENPYHEDYYYQEYYRRIEAKLAEEELGIRSKREPPKLTTPY
ITKTDVYAPVVHIEGSLGQVAVSTCYSPRRAISAVHAVQAQGPLEEQQDIRQQRLEVFSK
IEKLFVDLLEVEEVERMKSTILSEAEENGLMAKSQGKVENICSQLQHHNPSDTGVEFLPF
LLVSKGKKLLARLLPFLKQETALTILSIVTSNLPMLMSRDPEEALPVLYPPLRNVIGGLT
FSQLIVVLKNLTSSESLTYESLTLACQNKFGLSLLYALLSQGEKLLSSGVPLEPSIGDFE
SWTDTIFQVAGQLSQCSLVEPLLLPSNLLTLFCRYLDKRTVHQLKSNIESATGFVALPS
NT seq 2160 nt   +upstreamnt  +downstreamnt
atgagtgattcagagcagcaagaagaggccgatcatgtgtctcagcctcagtggcctgag
aacggagaggcttggagtgatggagaggacggcaccaccatggactgtgggcttctgcag
gccatggccgaggaagatgatgagattgatgtctacaacgaggagacgtttggaatggag
ctcgaggcacaaggggccgccgaggaccccggcagcggcctcctacagtttgaagaacct
cctccttctccgccaccacctccatgcacacctacacccgaccccaaaccgtttcaccgc
cactgctcgccctcccccctcagaccgagtagtccacagtatgtgccctgggctcccccg
gggcagcggggcagaggctgggggcagagaggggggccgtgcaggggccatttgtttgaa
gacccagctgtgatgaggatagtggagggccgaccaagcctgaagactcttgacagtgcc
atagtggaccttgggaacgccttgtaccagaagacctttgaggaagactacatgtcgccc
tctttcagaaaggccagaagaatctcaggatcgatacttcaggacagtgctgtagtgtgt
gtgattgatggtcacagaggccgaggccaacacctgccctccaacttcccggatttccca
tatcctgtctcttccttcaggggcaggggagaggaacacagaggatcctttgacagaaga
ccgtttggcgagagacgccccgctcagatgcatgcgtccatggcaccaggatccccgatc
ttctcccatcaaccgctgaccccacggcaacattacaaccagaccgggggcttcgtgttc
cctgcaaaccggccgtgcccctccactcctcagtcgctgactcccaagatgatgcaactt
cgcttcggcgccaactcgccgaggccgtcccccttttacagcccctcgtccaatccgatg
cagcatttcaggaaccccggccctgtcacccagctccacccacaacataaacgacttctt
aatcaaaaacaacacacattccaaagaaaagcagaggactgggacccgtactgcaatctc
atgacggccaaagagaaggagtggatcaccaggctgcagatgatccagctgcaaagtgag
aatccgtaccacgaggactactattaccaggagtactaccggcgaattgaagcaaagctg
gcagaggaggagctgggcatcaggagcaagagggagccccccaagctcaccactccgtac
atcacaaagaccgacgtctacgcgccagtggtgcacatcgaaggctccctgggtcaagtt
gccgtgtccacgtgttactcccctcgccgggccatcagtgcggttcatgcagtccaagct
cagggtccgctagaggaacagcaagacatcagacaacagcgattagaggtcttcagcaaa
atagaaaagctgttcgtggatctgttggaggtcgaagaggtggagagaatgaaaagtacc
attttgtctgaagcggaggaaaacgggttgatggcgaagtcgcagggaaaagtggagaat
atctgctcccagctgcagcatcacaacccctccgatacaggggtggagtttcttcccttc
ctgctggtctcaaaaggcaaaaagctgctcgcccgtctgctcccgtttctgaaacaggaa
accgcactgaccatcttgagcatcgtgacctccaaccttccaatgctgatgagcagagat
ccagaagaggcgcttcctgtgctctacccaccccttcgaaatgtgattggtggcctgacg
ttcagtcagctgattgttgtcctcaaaaatctgacgtcctccgagtctctgacatacgag
tcgctcactctggcctgtcagaacaagttcgggctgtcgctgctgtatgctctgctgtcc
caaggggagaagctgctgtcctctggtgtccccctagaacccagcatcggtgactttgag
agctggacggacacaatattccaggtggcgggacagctgtcccagtgttcactggtggag
ccgctgctccttccctcaaacctgctcaccctcttctgccgttacctggacaagcgcact
gtgcatcagctgaaaagcaacatcgagtctgcaaccggattcgtggctctgccatcgtag

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