Pungitius pungitius (ninespine stickleback): 119212769
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Entry
119212769 CDS
T07626
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03013
Nucleocytoplasmic transport
ppug03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119212769
03015 mRNA surveillance pathway
119212769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119212769
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119212769
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_ACIN1
RRM_3
RBD_AKAP-17A
DDHD
RRM_5
Nup35_RRM_2
Plexin_cytopl
RRM_MUD2_C
Menin
Motif
Other DBs
NCBI-GeneID:
119212769
NCBI-ProteinID:
XP_037319407
LinkDB
All DBs
Position
21:12235698..12238595
Genome browser
AA seq
268 aa
AA seq
DB search
MAPSPTKRKEDDKSKPRGKDKSGAPKEGADKDRGRDKNRTRRNASSGSSSSSSSSSSSSS
SGSSSSASSHSGSSSSRSSSSSSSSSPSPSRQRHNNRRRSRSKSKSAKKDERERRRRSPT
PKPTKVYLGRLTRNVIKEHIQEIFSTYGKIKMIDMPVNRIYPHLSKGYAYVEFETHGEAE
KALKHMDGGQIDGQEITVTAVLTPTVRPPPRRMSPPRRMPPPPPMWRRTPPRMRRRSRSP
RRRSPVRRRSRSPGRRRHRSRSSSNSSR
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggcgccatccccaacgaagaggaaggaggacgacaagagtaagccgcgaggcaaggac
aagtcaggggccccgaaggaaggagccgacaaggaccgcggccgagacaagaaccgcacg
aggcgcaatgcttccagcgggagcagcagctccagcagcagctcgagctcgagctcctcc
agtggctccagttcctctgcctccagccactcgggctcatccagctcccgctcctcttcc
tcctcctcgtcatcctcaccgagccccagccgccagcgccacaacaacagacggcgctcc
cgctcaaagtccaagtccgctaagaaggatgaaagggagcgacggcgtcggagccccaca
cccaaacccaccaaggtctacctgggccggctgaccagaaatgttatcaaggaacacatc
caggagattttctccacttacggcaagatcaagatgattgacatgccagtgaaccgcatc
taccctcacctgtccaaaggctacgcctacgtggagtttgagacccacggggaggcggag
aaggccctgaaacacatggacggaggtcagatcgacggtcaggagatcacggtcacagct
gtgctgactcccacagtgcgccctcccccacgcaggatgtcgcctccccgcaggatgccc
cctccgccaccaatgtggcgacgcacgccacctcgtatgaggaggagatctcggtctccg
cggcgacgctctccggtccgtcgcaggtcccgttcgcccggccgccgccggcaccgctct
cgctccagttccaactcctcccgctag
DBGET
integrated database retrieval system
