Pungitius pungitius (ninespine stickleback): 119212771
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Entry
119212771 CDS
T07626
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119212771 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119212771 (gspt1)
03012 Translation factors [BR:
ppug03012
]
119212771 (gspt1)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
119212771 (gspt1)
Translation factors [BR:
ppug03012
]
Eukaryotic type
Release factors
119212771 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PAM2
Motif
Other DBs
NCBI-GeneID:
119212771
NCBI-ProteinID:
XP_037319409
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All DBs
Position
21:15675686..15682343
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AA seq
596 aa
AA seq
DB search
MDPRDSAPDSWELEDAEAPAAASAAELPASFAALNVNAKPFVPNVNAAVFVPTSFQAGPA
ADTPAPDGATDPVARMEVAETAAPVENGGTEADMTTEEETWEQKEEPGGGGEDGGGGGGG
GGGGQEDLGSGGACLEGTAGSEDEEMMEEEEEEMPMHKVAPPPPDAPKKEHVNVVFIGHV
DAGKSTIGGQIMYLTGMVEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVG
RAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREH
AMLAKTAGVKHLIVLVNKMDDPTVHWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSG
LTGSNLKDPVPECPWYTGLPFISHLDSLPNFTRSNDGPVRLPIVDKYKDMGTVILGKLES
GCISKAQQLVMMPNRHTVEVLSLLSDDVETDDACPGENLKLRLKGIEEEEILPGFILCSP
DNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVQISALICLVDKKSGEKSKTR
PRFVKQDQVCIARMRAAGVICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagactcggccccggattcgtgggagctggaagacgccgaggccccggcc
gccgcctccgccgcggagctcccggcctccttcgccgccctcaacgtcaacgccaagccg
ttcgtgcccaacgtcaacgccgccgtgttcgtgccgacctcgttccaggccggacccgcc
gcggacacgccggctccagacggtgccactgatccagtcgccaggatggaggtggcagaa
acggccgctccagtggagaacggaggcacagaggcagacatgaccacagaggaggagacg
tgggagcagaaggaggagccaggaggaggaggagaagatggaggaggaggaggaggagga
ggaggaggaggacaggaagacctgggttcaggaggagcctgtctagaaggcaccgcggga
agcgaggacgaggagatgatggaggaggaagaggaggagatgcccatgcacaaggtggcg
ccgcctccgcccgatgcccccaagaaagaacacgtgaacgtggtcttcatcggtcacgtg
gatgccggtaaatccaccatcggaggacagatcatgtacttgactggaatggtggaaaag
cgaaccctggaaaaatatgaaagagaagcgaaagaaaagaacagggagacatggtacttg
tcgtgggccttggacacaaaccaggaggaacgagacaaagggaagactgtcgaggtcggg
agagcttacttcgagacggagaaaaaacatttcaccatcctggacgcccccggacacaag
agcttcgtcccaaacatgatcggcggagcgtcgcaagccgacctggccgtcctggtgatt
tctgctagaaagggtgagtttgagaccggctttgagaagggggggcagacgcgggaacac
gccatgctggctaaaactgcaggagtcaagcatctcattgtcctggtcaacaagatggac
gaccccactgtccactggagcctagagaggtacgaagagtgtaaggaaaagctcgttccc
tttctgaagaaggtgggcttcaaccctaagaaggacatccactttatgccttgctccgga
ctcacaggctccaacctcaaggaccccgtgcccgagtgcccttggtacacgggtttgcca
tttatttcccatctggacagtttgccaaacttcacccggtccaacgatggaccagtgaga
ctaccgatcgtagacaagtacaaggacatgggcaccgttattctgggcaagctggagtct
gggtgcatcagtaaggcccagcagctggtcatgatgccaaaccggcacacggtggaggtg
ttgagcctgctgagcgacgacgtggagacggacgacgcgtgtcccggggagaacctgaag
ctgaggctgaagggcatcgaggaggaggaaatcctccccggcttcatcctgtgcagcccc
gacaacctgtgccactccgggcgcaccttcgacgcgcagattgtcataattgagcacaag
tcaatcatttgtcccggttacaatgcagtccttcatatccacacctgcattgaagaagtg
caaatctcagccttaatctgcctggtggacaagaagtcgggggagaaaagcaaaacacga
ccacgctttgtgaagcaggaccaggtgtgtatcgccaggatgcgggcggcaggagtcatc
tgcttggagaccttcaaagacttccctcagatgggacgattcacactgcgggacgaagga
aaaaccatcgccatcggcaaagtgctgaagctggtgccagagaaggactaa
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