Pungitius pungitius (ninespine stickleback): 119212985
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Entry
119212985 CDS
T07626
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like isoform X1
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04020
Calcium signaling pathway
ppug04080
Neuroactive ligand-receptor interaction
ppug04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
119212985
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119212985
04082 Neuroactive ligand signaling
119212985
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119212985
Ion channels [BR:
ppug04040
]
Ligand-gated channels
Glutamate (ionotropic)
119212985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
NMDAR2_C
ANF_receptor
SBP_bac_3
MatE
Motif
Other DBs
NCBI-GeneID:
119212985
NCBI-ProteinID:
XP_037319800
LinkDB
All DBs
Position
21:13355205..13398528
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AA seq
1396 aa
AA seq
DB search
MVVPRGHPPPFPWPPLFLLLLLTSPLPLQARPLLLHPSINVAVVLSGSSYQNEVRGRLGG
ENFVDLPVVVSPVIVLVNDTNPRDLLTRLCDAMAMEKLHGVVFEDDVGAGADTQVAEVAQ
ILDFLSTQTALPIVGISGGSAVVIPYKTEGSSFLQMGASLEQQIISMFKLMEEYDWGEFA
VITSLLPGYDTFVDIIESYTDTSYFLWNLQDILTLEMSVGSNDGRTKRLLQQVDSQVLMA
YCSFEEAQYLFQQAAEVGLLGPGYIWMLTSQAVGNPEIPPPVSFPIGVIGVITDQWRKNL
RQRVREGVAIVAKGAESFKNQYGFIPEGHGNCNKMAKHSDNNTLFRHMLNVTWERKDLSF
NNQGFLSNPSMVIVALDRDRLWDKVGTYAQGILQVRYPVWPRYGSFLEHVSDDRHLTVAT
LEEHPFVMVENVDPGTGTCVRNTVPCRRQSNYTASGEATEWNVMGHAESYTKLCCKGFCI
DILKKLSRTIKFSYDLYLVTNGKHGKLVRGTWNGMIGEVVYRRADMAIGSLTINEERSEI
IDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYLSP
VGYNRSLVSAKTPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIF
LASYTANLAAFMIQEQYIDTVSGLSDKKFQKPHEHYPPFRFGTVPNGSTERNIRSNYPDM
HMHMTKYNQKGVEEALESLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGY
GIALQKDSRWKRLIDLALLQFLGDGDTQRLETVWLSGICQNEKNEVMSSKLDIDNMAGVF
YMLLVAMGLSLLVFAWEHLLYWKLRHSLRKSHKLDFLLAISRGIYSCYKGMEDPGHSSGF
AKPDLTSNYAQANMLKMLRTAKDLVSTANVETSLDNATKTIQQLSRHGGSLPVRIPQVAM
EAVPGGFAYITENHCPLTPPLTAVSSLKQQRGVTRPTPLRYTLPTRSTPCLYDRPLPVSS
LSSPHLAMGEQPPHQHLHQYQTTGRLYIDPHPQLPYMPYTDLQLPDIYASHPVSLPQNQH
GQAGFSQRKRRSKSFQCEDGDLGRRKHRDQEKNDISPVYLSELKANHLQENHISAPNVNT
MYSGERRCPRVESYSSWPPEDLMLRGRRRHRRPSFLKATWGSEQMRQLDESQSSQSSQSP
TTLPDLFPCILTPTTPAKPYNPAQLRNNLCLPRNQAYLHIREDQRRSNGRKVQKLRHSHS
THLPTYGEAVRHGTGLGRGMVRRATSLLSRQYAHYLNSYPGLPIYHGPLDLQHHSQAPSN
HPGTSPVCQLLACGGGRCGSQRALLYQDSVYGAYGVYQGSQTGSEALAGQAAGAQPAGSP
CVLRPWRRVSSLESEV
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atggttgttcccaggggacaccctcctccctttccttggccccctctcttcctcctcctc
ctcctcacctccccgctcccgctgcaggcccggccgctcctcctgcacccctccatcaac
gtggccgtggtgctgagcggctctagctaccagaatgaggtcagaggtcgcctcggcggg
gagaactttgtggacctgcccgtggtggtgagccccgtgattgtgctggtcaacgacacc
aacccccgagacctgctgacgcgcctctgcgacgccatggccatggagaagctgcacggc
gtcgtgttcgaggacgacgtgggcgctggcgccgacactcaggtggccgaagtggcccag
atcctggacttcctctccactcagacggctctgcccatcgtgggcatcagcggcggctct
gcagttgtcataccgtacaagactgagggatcatccttcctgcaaatgggagcatcgctg
gagcagcagatcatcagcatgtttaagctaatggaagagtacgactggggcgagtttgcg
gtgataaccagtttgctaccaggctacgacacctttgtagatataattgagtcctacacc
gacacctcgtatttcctgtggaatcttcaggacatcttgaccctggaaatgtctgttggg
tcgaatgacgggaggacaaaacgcttgctgcagcaggtggattctcaggtgctgatggcg
tattgctcttttgaggaggcgcagtacctgtttcagcaggccgccgaggtgggtctgctg
gggcccggctacatctggatgctcaccagccaggccgtcggcaaccccgaaatccctccg
cctgtcagcttccccatcggcgtcatcggcgtgattacggaccagtggaggaagaacctg
cgacagagagtgagggaaggtgttgccatcgtggcgaaaggagccgagagcttcaagaat
cagtacgggttcatccccgagggacacggcaactgcaacaaaatggctaaacactcggac
aacaatactctgttcaggcacatgttgaatgtgacgtgggaaaggaaagatctgtcattc
aataaccaaggcttcctgtccaacccctccatggtcatcgtcgctctggaccgagaccga
ctctgggacaaggtcgggacgtacgcccaggggatcctccaggttcgctacccggtctgg
ccccggtacggcagcttcctggagcacgtgtccgacgaccgccacctgaccgtggccacg
ctggaggagcaccccttcgtcatggtggagaacgtggacccgggcaccggcacgtgtgtc
cgcaacacggtgccctgccggcgccagtccaattacacggcgagtggcgaggccacagag
tggaatgttatgggccacgccgagtcctacaccaaactgtgctgcaagggcttctgcata
gacatcctgaagaaactgtcccgcaccatcaagttctcctacgacctctaccttgtcacc
aacgggaaacacggcaagctggttcgcgggacttggaacggcatgatcggagaggtcgtg
tacagacgagccgacatggccatcggctcgctcaccatcaacgaggagcgttcggaaatc
atcgacttctccgtgccgtttgttgagacgggcatcagcgtcatggtggcccgcagcaac
gggaccgtttccccgtctgcctttctcgagccctacagcccagcagtttgggtgatgatg
tttgtgatgtgcctgactgtggtggcggtgacagtttttgtgttcgaatacctcagtcca
gtgggttacaaccgcagcctggtgagcgccaaaacccctggcggtccaacattcaccatc
gggaagtccgtgtggctgctgtggggcattgtcttcaacaactcggtccccatcgaaaac
cccaaaggaacaaccagtaagatcatggtcctggtctgggccttctttgctgtgatcttc
ctggcctcatacactgccaacctggctgccttcatgatccaggagcagtacatcgacacg
gtgtccgggctctccgacaagaagttccaaaaaccgcatgagcattaccctccctttcgc
tttgggacggtcccaaacgggagcacagagaggaacatccgcagcaactaccccgacatg
cacatgcacatgacaaagtacaaccagaagggggttgaagaagctctggaaagcctcaaa
accgggaagctggacgccttcatctacgacgcggcggttttgaactacatggccgggaag
gacgagggctgcaagctggtaaccatcggcagcgggaaagtgtttgctaccacgggatac
ggcatcgctctgcagaaggactcccgctggaagcggcttattgacctggcgctgctgcag
ttcctcggagacggagacactcagcgcttagagactgtgtggttgtcgggcatctgccag
aacgagaagaacgaagtgatgagcagcaagctggacattgacaacatggcgggcgtcttc
tacatgctgctggtggccatgggcctcagcctgctggtcttcgcctgggaacacctgctt
tactggaagctgcgacactccctccgcaagtcccacaaacttgacttcctgttggccatc
agcaggggtatttacagttgttacaagggaatggaggaccctgggcattcgtctggtttt
gccaaaccagacctgacctccaactacgctcaagcaaacatgctgaagatgcttcgcacg
gccaaggacctagtctccaccgccaatgttgagacctctctggacaacgccaccaagacc
attcagcagttaagtcgtcatggcggcagcttgcccgttcgtattccacaggtcgcaatg
gaggctgtgccaggaggatttgcttatattacggagaatcattgccccctaaccccacct
ctgaccgctgtttcctccctaaaacagcagaggggagtcaccaggcccacgccactgcgc
tacacgctcccgactcgctctactccgtgtctgtatgaccggccacttcctgtgtccagc
ctcagcagcccccacttggccatgggtgagcagccacctcatcagcacctgcatcagtac
cagacgactgggagactgtacatagacccccatcctcagttgccctacatgccctacaca
gatctccaacttcctgacatctacgcctctcatccggtctccctgcctcaaaaccagcat
ggccaagcgggcttctcccaacggaagaggaggtccaagagtttccagtgtgaggatggg
gatttagggaggagaaaacacagggaccaggagaaaaatgacataagtccggtctatctg
agtgaactcaaagccaaccacctccaagagaaccacatctccgcccccaacgtcaacacc
atgtactcaggggagaggaggtgtccccgggtagagagctacagctcctggcccccggag
gatctgatgctgagaggaagacgcaggcaccgccgtccctccttcctcaaagcgacttgg
ggcagcgagcagatgcggcagctggacgaatcccagtcgtcccagtccagccaatcccct
accaccctgccagacctgttcccatgcattctaacaccaaccacacctgcaaagccctac
aaccccgcccaacttcgaaacaacctgtgcctccccaggaaccaggcctacctccacata
agggaggaccagaggaggtccaacgggcgcaaggtccagaagctgcgccactcccattcc
acccacctacccacgtacggagaagcggtacgacacgggacagggttagggcgggggatg
gtacggagagccaccagcttgctcagcagacagtacgcccattacctgaactcgtacccc
ggactacccatctaccatggccccctagacctgcagcaccacagccaggctcccagcaac
caccccggtaccagcccggtgtgtcagctgctggcttgcggcggtggaagatgtggaagc
cagcgggctctgctctaccaggacagtgtgtatggggcctatggggtctatcagggttcc
cagactggatcggaggccctggcaggtcaggcggcaggggctcaacctgcggggagtccc
tgtgtacttcgcccatggcgacgggtgtccagtctggagtctgaagtctga
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