Pungitius pungitius (ninespine stickleback): 119212995
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Entry
119212995 CDS
T07626
Symbol
lrit1b
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1b
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
119212995 (lrit1b)
Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
119212995 (lrit1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_1
ig
fn3
Ig_2
LRR_14
LRRNT
LRR_EndoS
LRR_9
Motif
Other DBs
NCBI-GeneID:
119212995
NCBI-ProteinID:
XP_037319845
LinkDB
All DBs
Position
21:complement(6014639..6017879)
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AA seq
649 aa
AA seq
DB search
MSRLYFAVFGLALVFLPLLSSSCPAQCSCFFHKLSDGSKARSVLCNDPEITEVPPNFPID
TSKLRIEKTAITRISSDNFHYLNSLEFLWMSFNSLNLLSVDSFRGLYNLDELRLDGNSLT
SFPWESLTDMPNLRLLDLHNNKITAVPADATVHMKNLTYLDLSSNSLTTVPADVLTMWLS
VKPLQDADSSKLILGLHDNPWMCDCRLYDLVQYQKSPSSSVSLIDTRLRCADPESLSGVL
FNEAELQRCQGPRVHTAVARVRSSLGNNVLLRCGTVGVPIPELSWSRADGKKMNGTVQQE
ISKEGIIWSILSVPAVAYRDSGKYICKATNFVGSADAVISLVITDSFPSEEAGGGTSKRT
RGKKPSGIGRAAYQEKLIARYVPPSSTANQPIIKPLNSQGVTGKYEVESYSISDAASEGR
GKAPAPPRPVEMDALSNLAANASSLQQAPEKRVVRSVKVMGDTDHTVSLNWRAPTATNVT
EFSVLYAVFGERDMRRLNVAAGKNRVTIDGLVPKTKYIACVCVKGLIPKKEQCVIFSTDE
AASASGTQKLINVVVITVACVIAVPLTLIVCCGALKKRCQKLLGRQSKDIQDSYVTFETL
GPGNKAKGMEGEYLTRLNPDESNRLLSARSSVDSEATARTEVPPNEYFC
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgactttattttgctgtttttggtctggctttagtttttcttcctttgctgagc
agttcatgtcctgcacaatgcagctgcttcttccacaagttaagcgacggttcaaaagca
aggagtgtactttgcaatgatccagagatcactgaggttcctccaaactttcccattgac
acatcgaagctccgcatcgaaaagacagccatcacacgcatttcaagcgacaacttccac
tacctcaacagcctggagtttctgtggatgtctttcaattcactgaatctactgagtgtt
gacagcttccgaggtctctacaacctggatgagctccggctggatggcaactccctcacc
tccttcccctgggaatctctgacggatatgcctaacctgaggctcctcgacctgcacaac
aacaagatcaccgctgtccccgccgatgccaccgtgcacatgaagaatctcacctatctg
gacttatccagcaactccctgaccaccgtgcccgctgacgttctcacaatgtggctgagc
gtgaagccgcttcaggacgcagattcctccaaactaattctcggtctccatgacaacccg
tggatgtgcgactgccggctgtacgacctggtccagtatcagaaatccccgtcgtcatcg
gtgtctctcatcgacaccaggctgaggtgcgctgatccggagagcttgtcgggggtcctc
ttcaacgaggccgagctgcagagatgccagggccctcgggtgcacacggccgtggctcgt
gtacggagctcgctgggcaacaacgtgctgctgcgctgcggcacagtcggagtccccatc
cccgagctttcctggagccgcgctgatggaaagaaaatgaacggcaccgttcagcaagag
atttcgaaggagggcatcatttggtcgattctgagcgtgccagcggtcgcgtaccgagac
tctgggaaatatatatgcaaagccaccaactttgtgggctccgcagacgccgtcatctct
ttggtgatcacggattcctttccgtcagaggaagcgggcggggggacgtccaagagaacc
agagggaagaagcccagtggcattggcagagcagcgtaccaggagaaactcattgccaga
tatgtacctccatccagcaccgctaaccagcccatcatcaaaccgctcaacagccaaggc
gtgaccgggaagtatgaggtggaaagctacagcatctcggatgctgcttcagagggaagg
ggcaaggctccagcccccccgagaccggtggagatggacgctctgagcaacttagctgcc
aatgcctcgtccctacagcaggctccggagaaaagggtggtgcgctcggtgaaggtgatg
ggcgacaccgaccacaccgtctctctcaactggcgagcccctacggccacgaatgtcacc
gagttcagcgtcctgtacgctgtatttggcgagagagacatgcgtcggctcaacgtggca
gccggaaagaaccgggtcaccattgacggccttgtgcctaagacaaagtacattgcctgt
gtctgcgttaaaggcctcatcccgaaaaaggagcagtgtgtgatcttctcgacggatgag
gcggcgagcgccagtggcacccagaagctcattaatgtggtggtgataacggtggcgtgc
gtgatcgccgtgcctctgacgctgatcgtgtgctgcggggcgctaaagaaacggtgccaa
aagctgctggggcggcaatccaaggacatccaggactcgtacgtcaccttcgagaccttg
ggccctggcaacaaagcgaaagggatggagggagagtatctgaccaggctaaatcccgac
gagtccaacaggttgctctcagcgaggtccagcgttgactcggaggccacagccaggact
gaggtgccacccaacgagtacttctgctga
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