Pungitius pungitius (ninespine stickleback): 119213040
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Entry
119213040 CDS
T07626
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like
KO
K23619
collagen type XXVIII alpha
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppug01002
]
119213040
Peptidases and inhibitors [BR:
ppug01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
119213040
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
119213040
NCBI-ProteinID:
XP_037319974
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All DBs
Position
3:23826189..23848213
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AA seq
1206 aa
AA seq
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MVLSLHWLLLLWGLQGLLAQEYEEDYEEEVVTTKKKKTKLNPSNVVPQNGKSIVSEECNL
ELAFLIDSSESAKDNHAQEKRFATEVMDRLQNLRLQTGQGLRSRAALLQYSSHVIVEQTF
RQWKGIDDFKARIAPIVYIGHGTYTTFAITNLTRIYLEESEPTSIKLAVLLFDGISHPRN
PDISSAVADAKNQGVRFFTVGITPEANLPANMAQLRLIASSPSSRYLHNLQDKGVVDKFI
KEITALADEGCPMATSQCECEKGERGPSGPPGKKGRPGEDGRPGLKGMKGESGLSGLPGR
EGAEGKSGYKGEKGVRGECGTPGIKGDRGPEGTIGPRGNRGLQGSIGPPGDIGPEGIMGK
KGERGLLGPPGIQGETGIGLPGPKGDVGYQGQSGAPGPPGLGEHGPPGPQGPQGVPGERG
LTGEGFPGPKGERGLDGPRGLRGQPGAGIKGDKGDFGAPGLPGPLGLPGAGIQGEKGVEG
PRGPPGGRGQRGEGFPGSKGDQGLPGEVGAPGERGAGDAGAKGEPGSTGLSGLPGLPGED
GAPGQKGESGPVGLRGLEGAPGIGTQGEKGDQGQRGIRGLAGPPGIAGPSGPKGEPGTQG
RGGLPGPPGRFVSGPKGDLGPSGPPGPLGETGYGLPGPKGDRGDSGPAGPFGPKGDGYPG
PVGPPGLPGLPGEPGQEGLGIPGPKGDVGFRGLPGSPGPPGEGLQGPLGNPGRPGAPGPT
GPPGQGVQGPKGEQGTQGVTGPRGIPGEGFPGAKGDRGSSGERGLKGIKGEFGDSGTEGK
PGRPGDKGEAGLTREDIIRMIKEICGCGIKCKEKPMELVFVIDSSESVGPENYEIIKDFV
NALVDRITVGRNATRIGLVVYSLEVKLVFNLARYATKQDIKQAIRNIPYMGEGTYTGTAI
RKATQEAFYSSRVGVSKVAIVITDGKTDKREPVKLELAVREAHAANIEMFALGIVNSSDP
TQKEFMMELNLIASHPDTEHVFLIDDFNTLPALESKLVSQFCEDEKGAAIFNGLTNGYNG
YGNNGKNGNYAGGGYEYRPGTTYTGSIIHTDGGRVDTTLHVSKGSSTVHGGGGQNVFTDT
HVGTERGDTFNRNTSVIRIPATEDSSSTQGSSSSSSSSSSKIITTSSSGVSVQHEPTPRP
ALPKETVPLDPRCVLVLDQGTCRDYNIRWYYDKQANACAQFWYGGCNGNRNRFDTEDECK
RTCVRV
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atggtcctctcgctgcactggctcctgctactgtggggacttcaaggtcttttggctcag
gagtatgaagaagactacgaggaagaggtggtgaccactaagaagaagaagaccaaacta
aatccatccaatgtagtacctcaaaatggcaaatctatcgttagcgaagaatgcaatttg
gagctagcctttctgatcgacagctcagagagcgccaaggacaaccatgcccaggagaag
cgcttcgccaccgaagtgatggaccggctgcagaacctgcggctgcagacgggccaaggc
ctcaggtcccgggcggccctccttcagtacagcagccacgtaatcgtagagcagaccttc
aggcagtggaagggcattgatgactttaaggctagaatcgctcccatcgtgtacatcggc
cacggcacctacaccaccttcgccatcaccaacctcacccgcatatacctggaggagtca
gagcccaccagcatcaagttggctgttcttctcttcgacggcatctctcacccaaggaac
cccgacatatcttcagccgtggccgacgccaagaaccagggcgtccgcttcttcaccgtg
ggcatcacgcctgaagccaacctgcccgccaatatggctcagctacggctaattgctagc
tcgccgtcctcgcgctaccttcacaacctgcaggacaaaggggttgtggataaattcatt
aaagagattacggcgttggcggatgaagggtgtccaatggccacgagccagtgtgagtgc
gagaagggtgagcggggacccagcggcccccctgggaagaagggtcgtcctggagaagat
ggaaggcctggcttaaaaggaatgaagggtgaaagtgggctcagtggacttccgggtcgt
gaaggagcagagggaaagtcgggatacaaaggagagaagggagtgagaggggagtgtgga
acacctggaattaaaggagacagaggtcctgaaggtaccatcgggccaagaggaaaccgt
ggacttcagggttccattggtccacctggcgatattggacctgaaggtataatgggtaaa
aaaggggaaaggggacttttggggccacctggaatccaaggggaaacagggattggcctt
ccggggcccaagggggatgtcggttatcaggggcagagcggcgctcctggccctccggga
cttggcgaacatggaccaccggggcctcaagggccacaaggagtcccaggagagagagga
ctgacaggagaaggtttccctggaccaaagggggagcgaggcttggacgggccgcgggga
ctgagaggacagccgggcgccgggatcaaaggagacaagggggattttggtgctcccggt
cttccagggccacttggcctcccaggagccggcatacagggcgagaagggagtcgaagga
ccaagagggccaccaggggggagaggccaacgaggggagggcttccctggatccaagggt
gaccaaggtttgccgggcgaggtcggcgccccaggagagagaggggccggagatgctgga
gctaagggcgaaccaggatctacggggctgtctggtttgccaggtctgccgggggaggac
ggggcccctggacagaagggcgagtcaggacctgtcggtctcagggggttagagggagca
cctggaatcggcacccagggcgaaaagggcgaccaaggccaaagaggaatacggggcctg
gcgggtccacctggcattgccggaccctccggaccaaagggagaaccagggacacaagga
agggggggtttacctggtccaccgggccgctttgtctccggacccaagggggatcttggc
ccgagtggaccgccaggtccattgggcgagactggctatggacttcccggtccaaagggg
gaccgtggagactcaggcccagcaggtccatttggtcccaaaggagacggctatccgggc
cccgtgggccctcctggtctgcctggacttccaggagaacctggccaggaaggactcggc
atccccggaccaaagggtgatgttggtttccgagggttacctggttcaccgggaccaccg
ggcgaaggcctccaaggacctctgggtaaccctgggcgacctggcgctccagggccaaca
gggccaccaggacaaggagtccaaggaccaaagggtgaacaggggactcagggcgtgacc
gggccaagggggattcctggagaaggctttcctggagctaaaggggaccgcggctcgtca
ggagagagggggctgaagggaatcaaaggagaatttggagattctggaactgaggggaaa
cctggccgacctggggacaaaggtgaagccggtctcactagagaggacatcatacggatg
atcaaagagatctgtggatgtgggatcaagtgcaaggagaagcccatggagctggtgttt
gttattgacagctcggagagcgttggcccagagaactatgagatcatcaaggactttgtg
aacgcgctggtggaccgaatcactgtgggccgcaacgccacccgtatcggcctagtggtg
tacagcctggaggtgaagctggtgttcaacttggcccgctacgccaccaaacaggacatc
aagcaggctatcaggaacatcccatacatgggagagggcacctacactggcacggccatc
cggaaagccacccaggaggccttctacagctcccgtgtgggggtcagcaaagtcgccatc
gtgatcactgacgggaagactgacaagcgggagcccgtgaagctggaactagctgtacga
gaagcacacgccgccaacattgagatgttcgccctgggcattgtgaacagctcagaccca
acgcagaaggagttcatgatggagctcaatctgatcgcctcccacccagacacagagcac
gtgtttctcattgatgacttcaacaccctgccagcgctggagtccaagctggtcagccag
ttctgtgaggatgaaaagggagccgcgatattcaacggactgactaacggctacaacggc
tatgggaacaacggcaaaaacggcaattacgccggcggtggctacgagtaccggcccggg
accacctacaccgggtcgatcatccacaccgacggaggccgtgtcgacaccaccctccat
gtcagcaaaggctccagcacagtacacggaggaggggggcagaacgtgttcaccgacaca
cacgtgggaaccgagcgtggagacacattcaatcgcaacacctcagtcatcaggattcct
gccacagaggactcctccagtacgcaaggctcttcctcatcttcgtcgtcttcttcctct
aaaataattaccacatcctcctcaggcgtgtccgtacaacatgagcctacgccgaggcca
gcgctccccaaagagactgtacccctggatccccgctgcgtcctggttctggaccagggc
acgtgtcgggattataacatccgctggtactatgacaagcaggccaatgcctgcgcccag
ttctggtacggaggctgcaacggcaaccggaaccgctttgacacggaggatgagtgcaag
aggacgtgtgtgagagtctga
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