Pungitius pungitius (ninespine stickleback): 119213040
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Entry
119213040 CDS
T07626
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like isoform X1
KO
K23619
collagen type XXVIII alpha
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppug01002
]
119213040
Peptidases and inhibitors [BR:
ppug01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
119213040
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
119213040
NCBI-ProteinID:
XP_037319936
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MSEHDRESRKVMVLSLHWLLLLWGLQGLLAQEYEEDYEEEVVTTKKKKTKLNPSNVVPQN
GKSIVSEECNLELAFLIDSSESAKDNHAQEKRFATEVMDRLQNLRLQTGQGLRSRAALLQ
YSSHVIVEQTFRQWKGIDDFKARIAPIVYIGHGTYTTFAITNLTRIYLEESEPTSIKLAV
LLFDGISHPRNPDISSAVADAKNQGVRFFTVGITPEANLPANMAQLRLIASSPSSRYLHN
LQDKGVVDKFIKEITALADEGCPMATSQCECEKGERGPSGPPGKKGRPGEDGRPGLKGMK
GESGLSGLPGREGAEGKSGYKGEKGVRGECGTPGIKGDRGPEGTIGPRGNRGLQGSIGPP
GDIGPEGIMGKKGERGLLGPPGIQGETGIGLPGPKGDVGYQGQSGAPGPPGLGEHGPPGP
QGPQGVPGERGLTGEGFPGPKGERGLDGPRGLRGQPGAGIKGDKGDFGAPGLPGPLGLPG
AGIQGEKGVEGPRGPPGGRGQRGEGFPGSKGDQGLPGEVGAPGERGAGDAGAKGEPGSTG
LSGLPGLPGEDGAPGQKGESGPVGLRGLEGAPGIGTQGEKGDQGQRGIRGLAGPPGIAGP
SGPKGEPGTQGRGGLPGPPGRFVSGPKGDLGPSGPPGPLGETGYGLPGPKGDRGDSGPAG
PFGPKGDGYPGPVGPPGLPGLPGEPGQEGLGIPGPKGDVGFRGLPGSPGPPGEGLQGPLG
NPGRPGAPGPTGPPGQGVQGPKGEQGTQGVTGPRGIPGEGFPGAKGDRGSSGERGLKGIK
GEFGDSGTEGKPGRPGDKGEAGLTREDIIRMIKEICGCGIKCKEKPMELVFVIDSSESVG
PENYEIIKDFVNALVDRITVGRNATRIGLVVYSLEVKLVFNLARYATKQDIKQAIRNIPY
MGEGTYTGTAIRKATQEAFYSSRVGVSKVAIVITDGKTDKREPVKLELAVREAHAANIEM
FALGIVNSSDPTQKEFMMELNLIASHPDTEHVFLIDDFNTLPALESKLVSQFCEDEKGAA
IFNGLTNGYNGYGNNGKNGNYAGGGYEYRPGTTYTGSIIHTDGGRVDTTLHVSKGSSTVH
GGGGQNVFTDTHVGTERGDTFNRNTSVIRIPATEDSSSTQGSSSSSSSSSSKIITTSSSG
VSVQHEPTPRPALPKETVPLDPRCVLVLDQGTCRDYNIRWYYDKQANACAQFWYGGCNGN
RNRFDTEDECKRTCVRV
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagcatgaccgtgagtccaggaaagtcatggtcctctcgctgcactggctcctg
ctactgtggggacttcaaggtcttttggctcaggagtatgaagaagactacgaggaagag
gtggtgaccactaagaagaagaagaccaaactaaatccatccaatgtagtacctcaaaat
ggcaaatctatcgttagcgaagaatgcaatttggagctagcctttctgatcgacagctca
gagagcgccaaggacaaccatgcccaggagaagcgcttcgccaccgaagtgatggaccgg
ctgcagaacctgcggctgcagacgggccaaggcctcaggtcccgggcggccctccttcag
tacagcagccacgtaatcgtagagcagaccttcaggcagtggaagggcattgatgacttt
aaggctagaatcgctcccatcgtgtacatcggccacggcacctacaccaccttcgccatc
accaacctcacccgcatatacctggaggagtcagagcccaccagcatcaagttggctgtt
cttctcttcgacggcatctctcacccaaggaaccccgacatatcttcagccgtggccgac
gccaagaaccagggcgtccgcttcttcaccgtgggcatcacgcctgaagccaacctgccc
gccaatatggctcagctacggctaattgctagctcgccgtcctcgcgctaccttcacaac
ctgcaggacaaaggggttgtggataaattcattaaagagattacggcgttggcggatgaa
gggtgtccaatggccacgagccagtgtgagtgcgagaagggtgagcggggacccagcggc
ccccctgggaagaagggtcgtcctggagaagatggaaggcctggcttaaaaggaatgaag
ggtgaaagtgggctcagtggacttccgggtcgtgaaggagcagagggaaagtcgggatac
aaaggagagaagggagtgagaggggagtgtggaacacctggaattaaaggagacagaggt
cctgaaggtaccatcgggccaagaggaaaccgtggacttcagggttccattggtccacct
ggcgatattggacctgaaggtataatgggtaaaaaaggggaaaggggacttttggggcca
cctggaatccaaggggaaacggggattggccttccggggcccaagggggatgtcggttat
caggggcagagcggcgctcctggccctccgggacttggcgaacatggaccaccggggcct
caagggccacaaggagtcccaggagagagaggactgacaggagaaggtttccctggacca
aagggggagcgaggcttggacgggccgcggggactgagaggacagccgggcgccgggatc
aaaggagacaagggggattttggtgctcccggtcttccagggccacttggcctcccagga
gccggcatacagggcgagaagggagtcgaaggaccaagagggccaccaggggggagaggc
caacgaggggagggcttccctggatccaagggtgaccaaggtttgccgggcgaggtcggc
gccccaggagagagaggggccggagatgctggagctaagggcgaaccaggatctacgggg
ctgtctggtttgccaggtctgccgggggaggacggggcccctggacagaagggcgagtca
ggacctgtcggtctcagggggttagagggagcacctggaatcggcacccagggcgaaaag
ggcgaccaaggccaaagaggaatacggggcctggcgggtccacctggcattgccggaccc
tccggaccaaagggagaaccagggacacaaggaagggggggtttacctggtccaccgggc
cgctttgtctccggacccaagggggatcttggcccgagtggaccgccaggtccattgggc
gagactggctatggacttcccggtccaaagggggaccgtggagactcaggcccagcaggt
ccatttggtcccaaaggagacggctatccgggccccgtgggccctcctggtctgcctgga
cttccaggagaacctggccaggaaggactcggcatccccggaccaaagggtgatgttggt
ttccgagggttacctggttcaccgggaccaccgggcgaaggcctccaaggacctctgggt
aaccctgggcgacctggcgctccagggccaacagggccaccaggacaaggagtccaagga
ccaaagggtgaacaggggactcagggcgtgaccgggccaagggggattcctggagaaggc
tttcctggagctaaaggggaccgcggctcgtcaggagagagggggctgaagggaatcaaa
ggagaatttggagattctggaactgaggggaaacctggccgacctggggacaaaggtgaa
gccggtctcactagagaggacatcatacggatgatcaaagagatctgtggatgtgggatc
aagtgcaaggagaagcccatggagctggtgtttgttattgacagctcggagagcgttggc
ccagagaactatgagatcatcaaggactttgtgaacgcgctggtggaccgaatcactgtg
ggccgcaacgccacccgtatcggcctagtggtgtacagcctggaggtgaagctggtgttc
aacttggcccgctacgccaccaaacaggacatcaagcaggctatcaggaacatcccatac
atgggagagggcacctacactggcacggccatccggaaagccacccaggaggccttctac
agctcccgtgtgggggtcagcaaagtcgccatcgtgatcactgacgggaagactgacaag
cgggagcccgtgaagctggaactagctgtacgagaagcacacgccgccaacattgagatg
ttcgccctgggcattgtgaacagctcagacccaacgcagaaggagttcatgatggagctc
aatctgatcgcctcccacccagacacagagcacgtgtttctcattgatgacttcaacacc
ctgccagcgctggagtccaagctggtcagccagttctgtgaggatgaaaagggagccgcg
atattcaacggactgactaacggctacaacggctatgggaacaacggcaaaaacggcaat
tacgccggcggtggctacgagtaccggcccgggaccacctacaccgggtcgatcatccac
accgacggaggccgtgtcgacaccacccttcatgtcagcaaaggctccagcacagtacac
ggaggaggggggcagaacgtgttcaccgacacacacgtgggaaccgagcgtggagacaca
ttcaatcgcaacacctcagtcatcaggattcctgccacagaggactcctccagtacgcaa
ggctcttcctcatcttcgtcgtcttcttcctctaaaataattaccacatcctcctcaggc
gtgtccgtacaacatgagcctacgccgaggccagcgctccccaaagagactgtacccctg
gatccccgctgcgtcctggttctggaccagggcacgtgtcgggattataacatccgctgg
tactatgacaagcaggccaatgcctgcgcccagttctggtacggaggctgcaacggcaac
cggaaccgctttgacacggaggatgagtgcaagaggacgtgtgtgagagtctga
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integrated database retrieval system
