Pungitius pungitius (ninespine stickleback): 119213043
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Entry
119213043 CDS
T07626
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03020
RNA polymerase
ppug04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119213043 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
119213043 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppug03021
]
119213043 (polr3a)
Enzymes [BR:
ppug01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119213043 (polr3a)
Transcription machinery [BR:
ppug03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
119213043 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
119213043
NCBI-ProteinID:
XP_037319938
LinkDB
All DBs
Position
21:5620841..5636905
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTKHTPLAYGVLDHRM
GTSEKDRPCLTCGKNLADCLGHYGYLDLELPCFHVGYFKATIGILQMICKTCSSIMLTKE
EKLQFMDFLKRPNLPYLQKRGLKKKISDKCRKRTICLNCSAFNGPVKKCGLLKIIHEKYK
TTKKVVEAFVSEFLQSFDTAIEHNKVVEPLLNKAQENLNPLVVLNIFKRIAQEDIPLLLM
NPEAGKPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANLELMRKLVRNGPELHPGANF
IQNRHTQMKRFLKYGNREKIAQELRFGDVVERHMIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFERAKACQIVASILVGQDERVKVSLPRPAIMKPMALWSGKQI
FSLILKPNKECPVKANLRTKGKQYCGKGEDLCSNDSYVVIHNSELMCGSLDKGTLGSGSK
NNIFYILLRDWGQLEAANAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKQDLLDDG
YKKCDEYIEALDTGKLQQQPGCTAEETLEALILKELSVIRDRAGSACLRELDKSNSPLVM
ALCGSKGSFINISQMIACVGQQAISGSRVPNGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPADMEGKDEPLEFSRVLDNIRAIHVCSDEPALSQNELVLTADAITKRVDFLC
CKDVFLEEIKKFIKSISERIKKTRDKYGINDNGTSEPKVLYQLDRITPTQLEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNI
STPIITAHLDVEDDADFGRLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENNKSSMYYVLQSLKQELPKVV
VQGIPEVSRAVIHIDEQSTKTIYKLLVEGDNLRAVMATHGVNGSRTTSNNTYEVEKTLGI
EAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADRDPTPVKRPLLFD
SADFHIPLIT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagtttagagagacagatgtggccaagaaaataagccacatctgcttt
gggatgaaatctgctgaacagatgcgtcagcaggcccacatccaggtggtcagcaagaat
ctgtacagccaagacaccaagcacactccactagcctacggagtgctggaccaccgcatg
ggcaccagtgagaaagacagaccgtgtttgacatgtgggaagaatctggcagattgcttg
ggacattatggctacttggatctggagctgccatgttttcatgttggctatttcaaagcc
acaataggaatcttacagatgatttgtaagacgtgctcaagtataatgctgacaaaagaa
gagaaactacagttcatggatttcctgaaaaggccaaatctgccctatctccagaaacga
gggttgaaaaagaagatctccgataaatgtcgcaaaaggacaatctgtctcaattgttca
gctttcaatgggccagtgaagaagtgtggccttcttaagatcatccatgaaaagtataaa
acaaccaagaaggtggtggaggcttttgtgtcagagtttctccagtccttcgataccgcg
attgagcacaacaaagtggtggaaccgttgctgaacaaagcacaggaaaacctgaaccct
cttgtggtgctgaacatcttcaagaggatcgctcaagaagacatccccttgctgctgatg
aaccctgaggccgggaagcctgcagacctcattctcacccgcctcctggtgccgccactc
tgcatacgaccctccgtggtcagcgacctgaagtccggcaccaacgaggatgacctcacc
atgaagctcacagagattatcttccttaacgatgtcatcaaaaagcatcgtatgacagga
gcgaagacgcagatgatcatggaggactgggacttcctccagctgcagtgcgctctctac
atcaacagcgagctttctggcatcccgctcaacatggcacctaagaaatggaccagaggc
ttcgtgcagagacttaaggggaagcaaggtagattcagaggaaacctctctggaaaaaga
gtggacttctctggcagaactgtaatttcccccgacccaaacctgaggattgacgaggtg
gccgtccccgtgcatgtggccaaaatcctcacgtacccagagaaggtgaacaaagccaat
ttggagctaatgaggaaactggtccgcaacggtcctgagcttcatcccggagccaacttt
atccagaatcgtcatacgcagatgaaaaggtttttgaagtatggaaaccgtgagaagata
gctcaggagctgaggtttggcgatgtggtggagaggcacatgatcgacggagacatcgtc
cttttcaatcgacagccctccctgcacaaactcagcatcatggcccacatcgccagagtc
aaaccccacaggactttccggttcaacgaatgtgtgtgcacgccgtacaatgcagacttt
gacggcgacgagatgaacctccatctgcctcagacggaagaagccaaagccgaggccctt
gtcctgatggggacaaaagcaaatcttgtcacaccaagaaatggcgaacctctgattgct
gccattcaggactttctgacaggcgcttacctcttgacgctgaaggacaccttctttgaa
agagcaaaagcctgtcagatagtcgcttcaatccttgtgggccaagatgaaagagtcaag
gtctctctcccccgcccagctatcatgaagccaatggctctgtggtcgggcaaacagatc
ttcagcctcattctgaagccaaataaggaatgtccagtcaaggccaacctgcggaccaag
ggcaagcagtactgtggcaagggagaggatctctgttccaacgactcgtacgtggtgatc
cacaacagtgagctgatgtgtggttctctggacaagggcaccttgggctccggctccaag
aacaacatcttctacatcctgctgagagactggggacagctggaagcggcgaacgccatg
tctcgcctggcgagactcgctccggtgtatctctccaaccgcggcttttccattggcatt
ggcgacgtgacacccggccagggtctgctgaaggccaaacaggacctgctggacgacggt
tacaaaaagtgcgacgagtacatcgaagctctagacaccggcaagctgcagcagcagccg
ggatgcacagcagaggagactctggaggctctcatcctgaaagagctgtctgtcatcaga
gatcgagcaggtagcgcctgcctcagggagctcgacaagagcaacagccccctcgtcatg
gctctgtgtggctccaaggggtctttcattaatatctcccagatgattgcctgtgtgggc
cagcaggccataagtggctctcgagtacccaatggatttgagaatcgctccctgcctcac
tttgagaagcactcaaaactgcctgctgctaaaggctttgtggctgacagcttctactct
ggcctgacacccacagagttctttttccacaccatggccggccgggagggtctggtggat
actgctgtgaaaacagcagagacggggtatatgcagaggcgtctggttaagtccctggag
gatttgtgctcgcagtatgacctgaccgtacgcagctccaccggcgacatcatccagttc
atctatgggggggacgggctggatccagctgacatggaggggaaggacgagccgctggag
tttagtagagtcctcgacaacatccgggcaatacacgtgtgttcagacgagcccgctctc
agtcaaaacgagctggtcctcacagccgacgccatcaccaagagagtggacttcttgtgc
tgcaaagacgtcttcctggaggagataaagaaatttatcaagagcatttcagaaaggatc
aagaagaccagagacaagtacggcatcaacgacaacggcaccagcgagccaaaagttctc
tatcagctggaccgcataacccccacccagctggagaagtttcttgaaacatgcagagac
aagtacatgagggcgcagatggagccgggctcagcggttggggctctgtgcgcccagagc
atcggggagcccggtactcagatgaccctgaaaaccttccactttgccggcgtggcatcc
atgaacatcaccctgggggtgcctcgcatcaaagagatcatcaatgcctccaagaacatc
agcacccccatcatcacggctcatttggatgtggaagacgacgctgacttcggccgcctg
gtcaagggaaggattgagaagactcttctcggggagatttctgagtacatagaggaggtc
tttctaccagatgactgcttcatcttggtgaagttgtccctggagagaataaggctgctg
cgactcgaggtaaatgcagaaacggtgcgttactccatctgcatgtctaagctacgagtg
aaacccggagacatcgctgtgcacggcgaggcggtggtgtgcgtctctccgcgagagaac
aacaaaagctccatgtactacgtgctgcagtctttaaaacaggaacttcctaaggtggtg
gttcaaggaatacctgaggtctcccgagctgtgattcacattgacgaacagagcaccaag
accatttataaactcttggtggagggggacaacctgagggctgtcatggcaacgcacggc
gtgaacggaagcaggaccacttcgaacaatacatacgaggttgagaagactctgggtatt
gaggcggctaggtccaccatcatcaatgagatccagtacaccatggtgaaccatggaatg
agcatcgaccggcgccacgtcatgctcctggcagatctcatgtcttacaagggggaaata
ctgggaattaccaggttcggtttggccaaaatgaaggagagtgtcctgatgctggcctcc
ttcgagaaaacagctgatcacctcttcgatgccgcctactttggccagaaggactcagtc
tgtggtgtgtctgagtgcatcattatggggattccaatgaacatcggaacgggactgttc
aagctactacacaaggccgacagggatcccactccagtgaagaggccgctcctcttcgac
agcgcggacttccatatacctctgatcacatag
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integrated database retrieval system
