Pungitius pungitius (ninespine stickleback): 119213048
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Entry
119213048 CDS
T07626
Name
(RefSeq) protein Tob1-like
KO
K14443
protein Tob/BTG
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119213048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119213048
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119213048
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
119213048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
PAM2
Motif
Other DBs
NCBI-GeneID:
119213048
NCBI-ProteinID:
XP_037319958
LinkDB
All DBs
Position
21:13142500..13145644
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AA seq
342 aa
AA seq
DB search
MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERQLKKKYEGHWYPDKPYKGSGFRCIHV
GEKVDPVVEQAAKESGLDIEDVRHNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNNDN
GSELDKEIKNSFNPEAQVFMPISEPVGASSESSSPSPPFGQSAAVSPSFMPRSTQPLTFT
TATFAATKFGSTKMKSSGRGGNNNNNNAATTPNSGGSNKVVRTSPTSNLGLNVNTLLKQK
AISTSMHSLYGLGLGQQQQQKASALSPNAKEFVFPSLQGQASPGAVFPGEGSLGLGPAPY
NNAFDVFAAYGSLNDKSLMDGLNFSLSNMQYSNQQFQPVMAN
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgaaattcaagtagcactcaactttattatttcctatttatacaacaaactc
cctcgacgacgcgtgaacatcttcggcgaagaactagagaggcagctgaagaaaaaatat
gagggccactggtatccggataagccatacaaaggttcggggttcaggtgcatccacgta
ggggagaaggtggatcccgtggtggagcaggctgccaaagagagcgggctggacatcgag
gacgtccggcataatctccctcaggaccttagtgtgtggatcgacccgttcgaggtgtcc
taccagattggggagaaggggccggtcaaggtgctctacgtggacgataacaacgataac
gggtcggagctggacaaggagatcaagaacagcttcaaccccgaggcccaggtcttcatg
ccaatcagcgagcccgtcggggcgtcctcagagtccagctccccctcgcctcccttcggg
cagtctgctgccgtgagcccctccttcatgccgcgctccacccagcccctaaccttcacc
actgccaccttcgctgccaccaaattcggctccacaaagatgaagagcagcggccgcggc
ggcaacaacaacaacaacaacgccgccaccacccccaacagtggcggtagcaacaaggtg
gtccgcacctccccaaccagtaatttgggtctgaatgtcaacaccctactgaagcagaaa
gccatctccacctccatgcactcgctgtacgggctgggcctggggcagcagcagcagcag
aaggcctccgcgctctcccccaacgccaaggagtttgtgttccccagcctccagggtcag
gccagccccggagccgtgttccccggggagggctccctgggtctcggcccggcgccgtac
aacaatgcctttgacgtgttcgccgcctacggaagcctcaacgacaagtccctcatggat
ggcctcaacttcagcctgagcaacatgcagtattctaaccagcaattccagccggtcatg
gctaactaa
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