Pungitius pungitius (ninespine stickleback): 119213105
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Entry
119213105 CDS
T07626
Name
(RefSeq) integrin beta-3
KO
K06493
integrin beta 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03266
Virion - Herpesvirus
ppug04081
Hormone signaling
ppug04145
Phagosome
ppug04148
Efferocytosis
ppug04510
Focal adhesion
ppug04512
ECM-receptor interaction
ppug04810
Regulation of actin cytoskeleton
ppug04820
Cytoskeleton in muscle cells
ppug05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
119213105
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
119213105
04512 ECM-receptor interaction
119213105
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119213105
04148 Efferocytosis
119213105
09144 Cellular community - eukaryotes
04510 Focal adhesion
119213105
09142 Cell motility
04820 Cytoskeleton in muscle cells
119213105
04810 Regulation of actin cytoskeleton
119213105
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119213105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119213105
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppug04147
]
119213105
04515 Cell adhesion molecules [BR:
ppug04515
]
119213105
04090 CD molecules [BR:
ppug04090
]
119213105
Membrane trafficking [BR:
ppug04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
119213105
Exosome [BR:
ppug04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119213105
Cell adhesion molecules [BR:
ppug04515
]
Integrins
Integrin beta subunits
119213105
CD molecules [BR:
ppug04090
]
Proteins
119213105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
I-EGF_1
EGF_integrin
EGF_2
EGF_TEN
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
119213105
NCBI-ProteinID:
XP_037320036
LinkDB
All DBs
Position
21:4492325..4504237
Genome browser
AA seq
795 aa
AA seq
DB search
MGALPTRGVLWMRVLIFTGITGVFGSNVCTSRGASTCKQCLAVHPSCAWCFQENFGHGEA
RSSRCDLQSNLVAAGCALTALESPTSKLQVIEDRPLSNKAAGATQDVTQIKPQKLHITLR
PDDAKRFTVRVRQVEDYPVDLYYLMDLSYSMNDDLFRLRTLGKGLAEAMNRTTSNLRMGF
GAFVDKPISPYMYTSPKEAIKNPCYSINTTCLPQFGYKHVLTLTEEVGRFTEEVKKQMVS
RNRDAPEGGFDAIIQAAVCKEEIGWRTGASHLLIFTSDAKTHMALDGRLAGIVRPHDGKC
HLNSDNVYSMSTTMDYPSLALITEKTSENNINLIFAVTNPVVPLYQNYSELIPGTTVGTL
SNDSGNVIQLILKAYAKIRSKVELELQGVPEELSLSFNATCLNGEVIPGLKSCSGLKIGD
TVSFSVEARARGCPKEKKKTFIIKPVGFKDSLSVTVDFECDCRCQAEAQPDSPACNHGNG
TYECGICLCHPGRLGPHCECAEGDYNPTEQDRCSGPAGSRGPQSAICSGRGDCVCGQCVC
HASDFGKVWGKLCECDDFNCLRYKGELCSGHGVCNCGFCQCAPDWQGDNCNCSRRTDTCM
SHLGLLCSGRGQCACGACECTQPGAYGATCDKCPTCPDACTMKKECVECKHFKRGKLFDG
NTCSRICKDEIVLVDEIVLHDTNAVNCTYKDEDDCVERFQYFEDTSGKSILFVVNEPDCP
KGPDILVLLLSVAGAILFLGLAALLIWKLLVTIHDRREFAKFEEERARAKWDTGHNPLYK
GATSTFTNITYRGKE
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctcttccgacgcgaggggtgttatggatgcgcgtcttgatatttactggaata
acaggagtgttcggttcaaacgtctgcacttccagaggtgccagcacatgcaagcaatgt
ctggctgtgcaccccagctgtgcgtggtgcttccaggagaacttcggccacggggaggcc
cgttcgtcccgctgtgacctgcagagtaacctggtggcggcgggctgcgccctgaccgct
ctggagtctccgaccagcaaactgcaggtgattgaggaccggcccctcagcaacaaggca
gcgggggccacgcaagacgtcacccagataaagccccagaagctgcacatcaccctcagg
ccagatgatgccaagcgcttcacagtgagggtgcgtcaggtggaggactaccccgttgat
ctctactacctcatggatctctcctactccatgaatgacgatctgttccgcctgaggacg
ctgggaaaaggcctggccgaggccatgaaccgcaccaccagcaacctccgcatgggcttt
ggagcttttgtggacaagccgatatccccttacatgtacacctcccccaaagaggccata
aagaacccctgctacagcattaacaccacctgcctgccgcagttcggctacaaacacgtc
ctgacgctgacggaggaggtcgggcgcttcacagaggaagtgaagaagcagatggtgtcc
aggaaccgagacgccccggagggaggcttcgatgccatcatccaggcggccgtatgcaag
gaggagatcggctggcgcaccggtgcttcccaccttctgatcttcacctcggacgccaag
actcacatggctctggacggtcgactggctgggatcgtgcggccccacgacgggaagtgc
cacctcaactccgacaacgtgtacagcatgtccaccaccatggattacccatctttggct
ctgatcacagaaaagacgtcggagaacaacatcaatctcatctttgccgtcacaaacccc
gtggttcctctttaccagaactacagtgagctgattcccggaaccacagtcggaaccctg
tccaacgactctgggaatgttatccagctcatactgaaggcctacgctaaaatccgttcc
aaggtggagctggagctccaaggcgtcccagaggagctgtccctgtccttcaatgccacc
tgtctgaatggcgaggtcatccctggtctcaagtcctgctccgggctcaagatcggagac
acggtatctttcagcgtggaggccagggctcgaggttgccccaaagagaagaagaaaacc
ttcatcattaagccggtgggcttcaaggactccctctccgtcaccgtcgacttcgagtgc
gactgccggtgccaggccgaggcccagcctgacagccccgcgtgtaaccacggcaacggc
acctacgagtgcggcatctgcctgtgccacccgggccgcctggggcctcactgcgagtgc
gcggagggtgactacaaccccacggagcaggaccgctgcagcggacccgcgggctcccgg
gggccccagtcggccatctgcagcggccgcggcgactgcgtgtgcggccagtgcgtgtgc
cacgccagtgatttcgggaaggtctgggggaagctgtgtgagtgtgacgacttcaactgc
ctgcgctacaagggggagctgtgctcaggccacggcgtctgtaactgtggcttctgccag
tgcgccccggactggcagggtgacaactgtaactgctccagacgcaccgacacctgcatg
tcccacctgggcctgttgtgcagcggtaggggccagtgtgcgtgcggggcctgcgagtgc
acccagccaggggcctacggagccacgtgcgacaagtgccccacgtgtccggacgcctgc
accatgaagaaggagtgtgtggagtgtaagcatttcaagagggggaaactttttgatggc
aacacctgttctcggatctgcaaggatgagatcgtgcttgtggatgaaatagtgctccat
gacactaatgctgtgaactgcacgtacaaggacgaggacgattgcgtggagcgtttccag
tattttgaggacaccagcggcaagtccatcctgtttgtcgtcaatgagcccgactgcccc
aaaggtccagatattttggtgttgctcctgtcggtggcaggagccatcttgttcctcggc
ttagcggctctgcttatctggaaacttctggtcaccatccacgacagacgggaattcgcc
aaatttgaggaagaacgcgctcgggccaagtgggacacgggacacaatcctctctacaaa
ggtgccacatctaccttcacaaacatcacctatagaggaaaagagtga
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