Pungitius pungitius (ninespine stickleback): 119213175
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Entry
119213175 CDS
T07626
Symbol
slitrk3a
Name
(RefSeq) SLIT and NTRK-like protein 3
KO
K25834
SLIT and NTRK-like protein 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119213175 (slitrk3a)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_14
LRR_9
Motif
Other DBs
NCBI-GeneID:
119213175
NCBI-ProteinID:
XP_037320187
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Position
3:complement(5260563..5270170)
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AA seq
904 aa
AA seq
DB search
MLWVTLLSTIALGWTTPIPLLEDSEEIDEPCFEPCYCEVKEGIFHVHCDSKGFTNVSQIS
QIWSRPFKLNLQRNSMRKLYFNSFLHLNNAISINLGNNALQDIHAGAFNGLGILKRLFLH
ENKLEVFRNDTFLGLESLEYLQADYNVIKRIESGAFRHLHKLRVLILNDNLIPMLPNYLF
RSISLTHLDLRGNRLKNLPYKGTLEYVGRNLMEIQLEENPWNCVCEIVQLKTWLERIPYT
ALVGEITCEYPFHLHGKDLREIKRSELCPLLSDAEIEAKLAIPRIPFSNENTWPTKPSSM
LSSFHNTASSVEYKERVVKPTKRPRPTKNPPTAHSNYPGINQPPVAGYQTRPPIPIICPS
GCTCNLHINDLGLTVNCKEKGFHNISELLPRPVNAKKLYLSGNLIQKIYRSDFWNFSSLD
LLHLGNNRISYVQEGAFINLPSLKSLYLNGNDIERLTPGMFRGLQMLRFLYFEYNVIREI
QPNSFSLMPNLELVFLNDNLLRSLPNGAFAGTNLARLNLRNNYFISMPVRGVLEHLTSIV
KIDLYQNPWDCSCDIAPLKQWLEKLSSVIVVGDVICKTPEFAFGKDLRSLEVEVICPELK
YSSSPSPPLPGRDDSTTKSSEMGEAGGRGAVPLSVLILSLLILFISAVFVAAGLFAFVLR
RRKNLPFRKRSEVDLTGIQMQCRIFEDPPRQSCAGNTGTPEKTTPSMHTHSHAGHTHAHG
HVYDYIPHPVTQMCNNPIYKPREGEIAEEDRAQFQEKKDSGNSSSSNYRTLLEKEREWTL
AVSNSQLNTIVTVNHSTADMAAFHENGGLCHTVIDSQRPTPTVGFVDCLYGTVPKLKDMH
VAHAHPPGMQYPDLQQDARLKETLLFTAGKGCYPDQSQSDYLELRAKLQTKPDYLEVLEK
SYRF
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgggttaccttgctgagcaccatagccttaggatggaccaccccgatcccacta
ctagaggactccgaggagatcgacgagccgtgctttgagccctgctactgtgaggtcaag
gagggcatcttccatgtccactgtgacagcaaaggatttacaaatgtcagccagatctcc
cagatatggagcaggccgttcaaactcaacctgcagagaaactccatgaggaagctttac
tttaacagcttcctccatctcaacaatgccatatccattaacctgggtaataacgccttg
caagatatccacgcgggagcgtttaatggcttaggaatactcaagcggctgttcctgcat
gaaaacaaactagaagttttccggaatgacacttttctggggttggagagtttagagtat
ctccaggcggactacaacgtcatcaaacggattgaaagtggtgcattccggcatcttcac
aaattgagagtgctcatactaaatgacaatctgattcccatgctcccaaattatcttttc
cgatccatctcactaacacacctggacctgagaggaaacagactaaaaaatttgccgtat
aagggcactctcgagtacgttggaaggaacctaatggaaatccagctggaggagaacccc
tggaactgtgtgtgtgagattgtccagttaaaaacttggctggagcgaattccttataca
gctttggtaggtgagatcacatgcgagtacccattccatttacatggcaaggacttacgg
gaaatcaagcgcagtgagctctgtccgctgctctcagatgcagagattgaggccaagctg
gcaattccccggatcccattcagcaatgagaacacatggcctactaaaccttcctccatg
ctctcgtcttttcacaacacagcctcttctgtggaatacaaggaaagagttgtcaagccc
accaaacgacctcggcccacaaagaaccctccaaccgctcatagcaactatccaggcatc
aaccagccccctgttgcgggctaccaaacaaggcctcccatcccaatcatttgtccatcc
ggatgtacatgcaaccttcacatcaatgacctggggctaacagtgaactgtaaagagaaa
ggctttcacaacatctccgagctcctcccacggcctgtcaatgccaagaaattatatctt
agtgggaacttaatacagaaaatataccgatctgacttctggaacttctcaagtttggat
ttactgcatttagggaataatcggatatcttatgtccaagaaggcgcctttatcaacctg
cctagtttgaaaagtctatatctgaatggaaacgacattgagagactcacccctgggatg
tttcgggggcttcagatgttgaggtttctttactttgagtacaatgtgatacgtgagata
caacccaactccttctccctgatgccaaacctcgagctggtttttctcaatgacaacctg
ttacgctcccttcccaatggcgcatttgctggcaccaatcttgcacgcctcaacctcaga
aacaactacttcatttccatgcccgtccgtggagttctggagcatctaacctccattgtt
aagatcgatctttatcagaacccctgggactgctcctgcgatatcgcccccctcaagcag
tggctggaaaagctgtcttctgtgattgtggtgggagacgtcatctgcaagacaccagaa
ttcgcgtttggcaaggacctgcgatcgcttgaggttgaggtcatctgtcctgagctcaag
tattcttcaagcccctcccccccactgcctggtagggacgactccaccacaaagagctcc
gagatgggcgaagccggtgggagaggcgctgtcccactgtccgtcctcattctcagccta
ctcatcctcttcatctctgccgtgtttgttgctgccgggcttttcgcctttgttcttcgt
cgcaggaagaaccttcctttccggaaacgttccgaggtagatctgaccgggatccaaatg
caatgcaggattttcgaggacccaccgaggcagagctgcgctggtaacactggcacccca
gaaaaaacgacccctagtatgcacactcactctcacgctggtcacacacatgcccatggt
cacgtttatgactacattccccatccggtgacgcagatgtgtaacaaccccatctataag
cctagagagggggagatagcagaggaagacagagcgcagtttcaagagaagaaagacagt
ggcaacagtagcagcagtaactacaggacattattagagaaggagagagagtggaccctg
gccgtctctaactctcaactcaacaccatcgtcacagttaaccactccacggctgacatg
gcagcatttcacgagaacggagggctatgccacacagtaattgacagtcagaggcccaca
ccaacagtgggctttgtagactgtttgtatgggacagtgcccaaactaaaggacatgcat
gtggcgcatgcgcacccaccaggcatgcagtacccggatttgcagcaggacgcacggctg
aaggagacattgcttttcacagcggggaaaggctgctaccccgaccagtcccaaagcgat
tacctcgagttaagggccaaacttcaaaccaagcctgattacctcgaagttttggaaaaa
tcctaccggttttaa
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