KEGG   Pungitius pungitius (ninespine stickleback): 119213183
Entry
119213183         CDS       T07626                                 
Name
(RefSeq) TATA box-binding protein-like 2
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Pathway
ppug03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    119213183
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ppug03000]
    119213183
   03021 Transcription machinery [BR:ppug03021]
    119213183
Transcription factors [BR:ppug03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    119213183
Transcription machinery [BR:ppug03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     119213183
  RNA polymerase III system
    TFIIIB
     119213183
  RNA polymerase I system
    SL1/TIF-1B
     119213183
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-GeneID: 119213183
NCBI-ProteinID: XP_062416256
LinkDB
Position
21:438262..440026
AA seq 196 aa
MEDSARKKGLQDSSRGGAEEAFMDLLPDELLAPCEVNSQNASAELPPQPVTPVTLETQQP
EMLFQIHNVVSTAKLGCSLDLLLIGRRAWNTEYRPEVFHGLTMRIRRPPTTAQLFTSGSM
VCLGAKSEEQSRVAAWRFFRILQKLGLPVRFLDFKIQNIVASCKTFPVRLDQLCLHQPCR
SGGRTVVDHMRCTCSA
NT seq 591 nt   +upstreamnt  +downstreamnt
atggaggactcggcccgtaagaagggtctgcaggactcctccagagggggggcagaggag
gcgttcatggacttgctacctgacgagctcctggcgccgtgtgaggttaactcccagaat
gcctcagctgagttgccacctcaacccgtgaccccagtgacccttgagacgcagcagcca
gaaatgctctttcagatacacaacgtcgtctccaccgccaagctgggctgctctctggac
ctgctgctcataggccgcagggcctggaacacagagtacagaccagaggttttccatggg
ctcacaatgaggatccgtaggccgccgaccacggcgcagctcttcacatccggatccatg
gtctgtttaggagccaagagtgaggaacagtctcgggtggcagcctggaggtttttccgc
atcctgcaaaagctgggcctcccggtccgcttcctggacttcaagatccagaacatcgtg
gcctcctgcaagaccttcccggtccgattggaccagctgtgcctccaccagccctgcagg
tcgggaggcaggacggttgtagaccacatgagatgtacatgcagtgcatga

DBGET integrated database retrieval system