Pungitius pungitius (ninespine stickleback): 119213227
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Entry
119213227 CDS
T07626
Name
(RefSeq) transcription factor COE2-like
KO
K09103
early B-cell factor
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119213227
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
119213227
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Motif
Pfam:
COE1_HLH
COE1_DBD
TIG
Motif
Other DBs
NCBI-GeneID:
119213227
NCBI-ProteinID:
XP_062416065
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All DBs
Position
21:16512460..16520218
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AA seq
440 aa
AA seq
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MSRVGGVGCNLSGPLQSPGSEQVLKRRKIAANHPLCRVDDTLEPALVLGCGCSVPHGDGG
AEDGLDDGCVVLSSTVSVDGHVLAVSDNMFVHNNSKHGRRARRLEPGESVENTMEYATPC
IKAISPSEGWTTGGAMVIVIGENFFDGLQVVFGSMLVWSELITAHAIRVQTPPRHIPGVV
EVTLSYKSKQFCKGAPGRFIYTALNEPTIDYGFQRLQKVLPRHPGDPEKLAKEILLKRTA
DLVEALYGNPHSNQDVLLKRAADIAEALYSVPRPHSQLQALPSSPAHCSVMGLGSYPSQL
GVSIGEHGQSSQGYIRNSSSLSPRGYPSASTPQHSSYGGGGGMTGGYGTVPMTSLGVPGS
PGFSSASPTGSPYIMPSSPTIPGSSSSSSSLLPFSSFPSAAKQKSAFAPVLRPQGSPSPA
CPATGGNSFRAMMGLVVPPM
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtccagggtgggaggggtcggctgcaatctttctggcccgcttcagagtcctggcagc
gaacaagtcctgaagagacgaaagattgcagccaatcaccctctctgcagagtggatgac
acgctggagcctgcccttgtccttggctgtggctgcagcgtaccacacggtgatggagga
gcagaggatggactcgatgatggctgtgtggtcttgtccagcaccgtgagtgtagatggc
cacgtcctggcagtgtccgacaacatgtttgtccacaacaactctaagcacggccgaagg
gcccgcagactggagcccggcgagtctgtggagaatactatggaatatgccaccccgtgc
atcaaagcaattagtcccagtgagggctggaccaccggcggggcgatggtcatcgtcatt
ggggagaacttttttgacggcctgcaggtggtgtttggcagcatgctggtgtggagtgag
ctgatcacagcacacgccatccgtgtccagacgcctcctcgacacatccccggggtcgtg
gaggtcacactgtcttataaatccaaacaattctgcaagggagcacctggacgcttcatt
tacacagccctaaatgagcccactatagactatggcttccagcgacttcaaaaggtcctt
cctcgacatcctggtgacccggagaaattagccaaggagattctcctaaagagaacagca
gatcttgtggaggccctctacggaaatccacacagtaatcaggacgtgctgctgaaacgt
gcagcagacatcgccgaggcgctctacagtgttcctcgtcctcacagtcagctgcaggcg
ctgcccagctcaccggcccactgcagtgtcatgggcctgggctcatatccttctcagtta
ggcgtcagcatcggggagcacggacagagcagccaaggttacatcagaaattccagcagt
ttgtctccaaggggttacccatcagcctccactcctcagcactcaagttacgggggcggc
ggagggatgactggaggctatgggacagttcccatgaccagtctaggagtccctggctct
cctggtttcagcagtgcctcccccaccggctctccctacataatgccgtccagccccacc
ataccagggagctccagctcttcatcgtccctcttgcctttctcctccttcccgtctgct
gctaaacagaagagtgcttttgcccccgtcctcaggccccagggctctccctcccctgcc
tgccccgccacaggggggaacagcttcagagcgatgatgggcctggttgttcccccgatg
taa
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