Pungitius pungitius (ninespine stickleback): 119213260
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Entry
119213260 CDS
T07626
Symbol
ldb3b
Name
(RefSeq) LIM domain-binding protein 3b
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119213260 (ldb3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
119213260 (ldb3b)
Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
119213260 (ldb3b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
119213260
NCBI-ProteinID:
XP_037320331
LinkDB
All DBs
Position
21:complement(7096886..7107623)
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AA seq
288 aa
AA seq
DB search
MTTYTVTLSGPAPWGFRLQGGKDFNMPLTISRITPGSKAVGGSLAQGDIISAIDGLSTEG
MTHMEAQNKIKSASSKLALTMQKSKRAAAFSTTPRMDSPMPVIPHQKVIANTAGNVEYSP
SFNPTALKDSALSTHKPIEVRGPGGKATIVHAQYNTPISMYSQDAIMDAIAGQSQAKGHE
SEEAGSPLAGALPVKDPVVDCASPVYQAVIRPGENQDMSDWARRADTLQSKSFRMLAHLT
GTEYLQDPDEEALQKSRDKFESEVKGPRFAKLKNWHQGLSSQILNVQE
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgactacgtatacggtgactctgagtggccccgcaccatggggcttcagactacagggg
ggaaaggacttcaacatgccactcaccatctccaggataactcccggcagcaaggcagtg
ggcggcagcctggctcagggtgacatcatctcagccatcgatgggctcagcactgagggg
atgacgcacatggaggcgcaaaacaagatcaagtctgcctccagcaagctggcactcacc
atgcaaaaatcaaaacgtgccgcagcattttccacaactccgagaatggactcacccatg
ccagtcatcccccaccagaaggttatcgcaaacacagctggaaatgtggagtactctccc
agcttcaaccccactgctctgaaagattcagccctatccactcacaaacccattgaggtg
agaggtccaggggggaaggccaccattgttcacgctcagtacaacacgccaatcagcatg
tactcacaggacgccatcatggacgccattgcagggcagtcgcaggccaaaggacacgag
agtgaggaggcgggctcacccttggctggagctctgcctgtcaaggaccccgtggtggac
tgcgcgtctccggtttaccaggcggtgatccggccaggagagaaccaggacatgtctgac
tgggctcgccgtgctgacacccttcagtccaagagcttcaggatgctggcccacctcact
ggcactgaatacctgcaagacccagatgaggaagctctgcagaagtcgagagataagttt
gagtcggaggtgaaagggccccgcttcgccaagctgaagaactggcaccaaggactgtcc
tcacagatcctcaacgtccaggaatag
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