Pungitius pungitius (ninespine stickleback): 119213288
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Entry
119213288 CDS
T07626
Name
(RefSeq) transcription factor Sox-9-A-like isoform X1
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119213288
Transcription factors [BR:
ppug03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
119213288
SSDB
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Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
119213288
NCBI-ProteinID:
XP_037320380
LinkDB
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Position
21:12086252..12089798
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AA seq
497 aa
AA seq
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MNLLDPYLKMTEEPDKCLSDAPSPSMSEDSAGSPCPSGSGSDTENTRPSENGLLGLDGEF
KKDEDDKFPACIREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARR
KLADQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKS
VKNGQSESEDGSEQTHISPNAIFKALQQADSPASSMGEVHSPGEHSGSQGPPTPPTTPKT
DVSSSKMDLKREGGIRSLSDGTGGRQLNIDFRDVDIGELSSDVISHIETFDVNEFDQYLP
PNGHPGSAGGPGSSAPVAYTGSYSISGGGPVSPQAASAAAWLAKSQNQQGQQQQHSLTPL
GGGGAEHRTQIKTEQLSPSHYTEQQGSPQHVAYNSPFNLQHYSPPSSAYPAAISRGQQYD
YADHQGGGAAGYYSHAGAAAAAAGQASGLYSTFSYMSSPSQRPMYTPIADNTGVPSIPQS
SPQHWEQAPVYTQLTRP
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcctcgacccttacctgaagatgacggaggaaccagacaagtgtctctccgac
gccccgagccccagcatgtccgaggactccgcgggatctccgtgcccgtccggctcgggc
tccgacacggagaacacccggccttctgagaacgggctactcggtcttgatggagagttt
aagaaggatgaggacgataagtttcccgcttgcatccgcgaggctgtgtcccaggtgctc
aagggctacgactggactctcgtgcctatgccagtgcgcgttaacgggtcctccaagaac
aagcctcacgtgaaaagaccgatgaatgccttcatggtgtgggcgcaggctgcgcgcagg
aagctggctgatcagtaccctcacctgcacaacgcggagctcagcaaaactctggggaaa
ctctggagacttctcaatgaaggcgagaagcggccgtttgtggaggaggccgagcggctg
cgggtgcagcacaagaaggaccaccccgactacaaataccagccccggcggaggaagtcc
gtgaagaacggccagagcgagtcggaggacggcagtgagcagacgcacatttcccccaat
gccatcttcaaagctctccagcaggcggactccccggcctccagcatgggagaggtgcac
tcaccgggtgagcactcaggctcccaggggccccctactcctcccaccaccccaaagact
gatgtcagctcgagcaagatggacctaaagcgagagggtggcatccgctctctgtccgac
ggcaccggcggccgccagctcaacatcgacttccgcgacgtggacatcggcgagctgagc
agcgacgtcatctcccacatcgagaccttcgacgtcaacgagttcgaccagtaccttccg
cccaacgggcaccccggctcagcgggcggccccggcagctccgcgccggtcgcttacacc
ggcagctacagcatcagcggcggcggcccggtgagcccgcaggcggcatctgccgcggct
tggctggcgaaaagccagaaccagcagggacagcagcagcagcattctctgacccctctg
gggggagggggcgccgagcaccggacccagatcaagacggagcagctgagcccgagccac
tacaccgagcagcagggctccccgcagcacgtggcctacaacagccccttcaacctgcag
cactacagccccccgtcctccgcctacccggccgccatctccagagggcagcagtacgac
tacgccgaccaccaggggggcggggccgccggctactacagccacgcgggggcggcggcg
gcagcggcggggcaggcctcggggctctactcgactttcagctacatgagcagccccagc
cagaggcccatgtacacgccgatagccgacaacacgggggtgccgtccatcccgcagagc
agcccgcagcactgggagcaggcgccggtctacacccagctcaccaggccttga
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