Pungitius pungitius (ninespine stickleback): 119213299
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Entry
119213299 CDS
T07626
Symbol
top2a
Name
(RefSeq) DNA topoisomerase 2-alpha
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppug03032
]
119213299 (top2a)
03036 Chromosome and associated proteins [BR:
ppug03036
]
119213299 (top2a)
Enzymes [BR:
ppug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
119213299 (top2a)
DNA replication proteins [BR:
ppug03032
]
Eukaryotic type
DNA Topoisomerases
119213299 (top2a)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
119213299 (top2a)
Centrosome formation proteins
Centriole proteins
119213299 (top2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
HATPase_c
Toprim
HATPase_c_3
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
119213299
NCBI-ProteinID:
XP_037320403
LinkDB
All DBs
Position
21:complement(1642612..1653453)
Genome browser
AA seq
1574 aa
AA seq
DB search
MAEPLKQSLFDNKPMEKIKKDPKRMSVERIYQKKTQLEHILLRPDTYIGSVEPVTQQMWV
YDEDDGLNCRDVTFVPGLYKIFDEILVNAADNKQRDKKMSTIKINIDVENNTISVWNNGK
GIPVVEHKVEKVYVPALIFGQLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETSC
RESKKSFKQVWYDNMSRTGDSQIKPFDGEEYTCITFRPDLAKFKMSILDRDTVALMTRRA
YDIAGVSKGVRVFFNDKRLPLTGFRSYVDMYVKDRVDELGAALTVVHEVVNDRWEVCLTT
SEKGFQQVSFVNSIATTKGGRHVDYVADQVVSKLIEVVKKKNKAGVAVKPFQVKNHLCLF
VNCLIENPTFDSQTKENMTLQQKTFGSTCPLSDKFIKQATSCGVVESIMNWVKFKAQTQL
NKKCSSVKHTKIKGVPKLDDANDAGGKNSIGCTLILTEGDSAKTLAVSGLGVVGRDRYGV
FPLRGKMLNVREATLKQIMENAEINSIIKIIGLQYKKNYSDPESLKSLRYGKIMIMTDQD
QDGSHIKGLLINFIHHNWPSLLRHNFLEEFITPIIKATHKKSQLSFYSIPEYDAWKQSQP
NQKAWKIKYYKGLGTSTSQEAKEYFSDMQRHRIPFKYSGPQDDEAISLAFSKKKVDERKE
WLTNFMVNRRQRRAHNLPEDYLYSQSTKSLSYNDFVNKELVLFSNSDNERSIPCLVDGLK
PGQRKVLFSCFKRNDKREVKVAQLAGSVAEMSAYHHGEISLMMTIVGLAQNFVGSNNLNL
LQPLGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPAVDDNLLKYNVDDNQRVEPEWYLP
IIPTVLVNGAEGIGTGWASKIPNYDIREIVSNIHRLLSGDEPLPMLPNYKGFRGTIDQVM
DNQFINSGEVAIVDSTTIEISELPVKTWTQCYKENVLEPMLSGSEKVPPLITDYKEYHTD
TTVRFVVKMSEEKLCEAEAAGLHKVFKLQNTLTCNSMVLFDHVGSLIKFESVQDVLKAFF
ELRMKYYVLRKDWLLGMLGAESAKLTNQARFILEKIEGSLVIENKPKKELIRMLQQMGYD
SDPVKAWKQAQEKNVDIVEEEQQQEEDAEEEDTSGPDYNYLLSMPMWYLTKEKKDELCKQ
RDAKMTELNTLKKKAPTDLWKEDLAAFLEELEVVEEKEREAARMPVAKKGAAKGKALKVK
QETQPTPQGRRVVPRITSTMKAEANKKACLKRGEGKKSKNVKTEKVVVKMEFGEDEENEG
PRETIGLAARLGKKPKTIKTEKEAPKGSRQSTLQFKPMSKKPKKNPWSDEDSEADLSDGE
MEEEVAPREKVQRKTKAAVRYNMSDDSESDFDVRGPKVASRRPAVASGDEDEDDEDNFVP
EPTADSDADSPAPPPKAPAPLRKETAAKSKTTTKSKSSSQSDDLSAAPKAPAQRKTKAAP
KKAASVRKPAAKKAADVKQPSIADALSKSKPAKRVPSFDSGDSASEAEAPAAKAKPVKRK
KVVSDDSDSSSSDLMSRLKAKTVTSKKTKSWDEDDSFQLSDQEAAAPLAGRDKPARARKP
VTYKLQSDSDSDDL
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaccactcaagcagtccctctttgataacaagccgatggagaagataaagaaa
gatccgaagcggatgtcggtggagagaatctatcagaagaagactcagttggagcacatt
ctgctccgaccggacacctacattggatctgtagagccagtcacccaacaaatgtgggtg
tacgatgaggacgatggactgaactgccgcgatgtgacgtttgtccctgggctttacaag
atttttgacgagatccttgtaaatgcagctgacaataagcaaagggacaagaagatgtcc
accatcaagatcaacatagatgttgagaacaacaccatcagtgtgtggaataacgggaag
gggatccctgtggtggagcacaaagtggagaaggtgtatgtgcctgctctcatctttgga
cagctcctcacctccagcaactatgatgacgacgagaagaaagtcactggtggacgcaat
ggatatggtgctaaactttgcaacatctttagcacgaagttcactgtagagacttcctgc
agggagtcaaagaagagcttcaagcaggtctggtatgacaacatgagcaggaccggggat
tcccaaatcaaacccttcgacggggaggaatacacctgcatcaccttcaggccggacctg
gccaagttcaagatgagcatcctggacagagacacggtggctctgatgaccaggagggcg
tacgacatcgctggagtctccaaaggcgttcgtgtgttcttcaacgacaagaggctgccg
ctcacaggtttccgtagctacgtggacatgtacgtgaaggaccgggtggacgagctcggc
gcggccctcaccgtggtccacgaggtcgtcaacgaccgctgggaggtctgcctcaccacg
agcgagaagggtttccagcaagtcagcttcgtcaacagcatcgctacgactaagggaggg
aggcacgtcgactatgttgctgaccaggtggttagcaagctcatcgaggtggtgaagaag
aagaacaaggccggggtggccgtcaagcctttccaggtgaagaaccacctgtgtctgttc
gtcaactgcctgatcgagaacccgacctttgactctcagaccaaagagaacatgacgctt
cagcagaagaccttcggctccacttgtcctctcagtgacaagtttattaaacaggccaca
tcctgtggggttgtggagagcatcatgaactgggtgaagttcaaggctcagacgcagctg
aacaagaaatgctcgagcgttaagcacacaaaaatcaaaggggtgccaaaactggacgac
gccaacgatgcaggtgggaagaactccatcggctgcacgctcatcctcaccgagggagac
tcggccaagacgctggccgtgtccgggctgggcgtggtcggcagggaccgatacggcgtc
ttccccctcagaggaaaaatgctcaacgtccgggaggcaacgctcaagcagatcatggag
aacgccgaaatcaacagcatcattaagatcatcggccttcagtacaagaagaactacagc
gacccagagtccctcaagagtctgcgttatggcaagatcatgatcatgaccgatcaggat
caagatggctcccacatcaagggcctcctaatcaacttcatccatcataactggccttca
ctgctgcgccacaacttcctggaggagttcatcacacccatcatcaaggcaactcataag
aagtctcagctctctttctacagtatccctgaatacgatgcatggaagcaaagccagccc
aaccaaaaagcctggaagataaaatactacaaaggtttgggaaccagcacatctcaggag
gccaaggagtacttctctgacatgcagagacaccggatcccattcaagtactccggacct
caagatgacgaagcgatttccctcgcctttagcaagaagaaggtggacgagcgtaaagag
tggctgaccaacttcatggtgaaccggcgccagcgcagagctcacaacctgccggaggat
tacctgtacagtcagtccaccaagtcgctctcctacaacgacttcgtcaacaaggagctg
gtgctcttctccaactctgacaatgagaggtccatcccctgcctggtggacggtctgaag
ccaggccagaggaaggtgctgttcagttgcttcaagaggaacgacaagcgggaggtgaag
gtggcccagctggctggctccgtggctgagatgtcagcctaccaccacggagagatctcg
ctgatgatgaccattgtgggtttggcccagaactttgtgggaagcaacaacttgaacctg
ctgcagcctctgggtcagttcggaacccggttgcacggaggcaaggactctgccagccct
cgatacatcttcaccatgctcagccctctggcccgcctccttttcccggctgtggacgac
aacctgctcaagtacaacgtcgacgacaaccagcgcgtggagcccgagtggtacttgccc
atcatccccacggtgctggtgaacggcgccgagggcatcggcaccggctgggccagcaag
atccccaactacgacatccgggagatcgtctccaacatccaccgcttgctcagcggcgac
gagcccctccccatgcttccaaactacaagggcttcagaggcaccattgaccaggtgatg
gacaaccagttcatcaacagcggagaggtggccatcgttgattccaccaccattgagatc
tctgagttgccggtcaaaacctggacgcagtgctacaaggagaacgtgttggagcccatg
ctgagcggctcggagaaagtcccgcctctgatcacggactacaaggagtaccacaccgac
accaccgtgcgctttgtggtcaagatgagcgaagagaagctgtgcgaggcggaggcggcc
ggcctccacaaagtcttcaaacttcagaacaccctcacttgcaattctatggtgctgttt
gaccacgtgggcagcctgattaagtttgagtcagtgcaggatgtcctcaaggccttcttt
gagttgaggatgaagtactatgtgctgaggaaggattggttgctgggcatgctgggggcg
gagagcgctaagctcaccaaccaggctcgcttcatcttggagaaaatcgagggcagcttg
gtcatcgagaacaagccaaagaaggagctgattcgcatgctgcagcagatgggctacgac
tctgacccggtcaaggcttggaaacaggcccaagagaagaatgttgacatcgtggaggaa
gagcagcagcaggaggaagacgccgaggaggaggacaccagcgggccagactacaactac
ctgctgagcatgcccatgtggtacctgaccaaagaaaagaaggacgagctgtgcaaacag
agggacgccaagatgacggagctcaacaccctgaagaagaaggctcccacagacctgtgg
aaggaagacctggccgccttcctggaggaactggaggtggttgaggaaaaggaaagggag
gccgcccgaatgccggtggccaaaaagggggccgccaagggcaaagcgttgaaggtgaag
caggagactcagcccacgccgcagggtcgccgcgtggtcccccgcatcaccagcaccatg
aaggccgaagccaacaagaaggcttgtctgaagagaggagagggcaagaagtccaaaaat
gtcaagaccgagaaggtggtggtgaagatggagtttggagaagatgaagagaacgagggg
ccgagggagacgattggcttggctgcacgactggggaagaaacccaaaactataaaaacg
gaaaaagaagcgccaaagggcagccggcagagcacgcttcagttcaagcccatgtccaag
aagcccaaaaagaacccgtggtcagacgaggactcggaggccgacctgtccgacggagag
atggaggaagaggtcgccccgagggagaaggtccaacgcaaaactaaagctgcggtgagg
tacaacatgtccgacgacagcgagagtgacttcgacgtccgggggccgaaggtcgcgtcc
aggcggccggccgttgccagcggcgacgaggacgaggacgacgaggacaactttgtccca
gaacccacggccgacagcgacgccgactcgcccgccccacctcccaaagcacccgccccc
ctgaggaaggaaacggcagcaaagagcaaaacgacgacgaaaagcaagtcgagctctcag
tcggacgatctgtcggctgcgcccaaagcgccggctcagcgcaaaaccaaggcggcaccc
aagaaggccgcttcggtcaggaagcctgccgctaagaaggctgcagatgtgaagcagccg
tccatcgcggacgctctgtccaagtccaaacccgccaagcgggtcccctcgttcgactcg
ggcgactcggccagcgaagccgaagcgccggccgcgaaggccaaaccggtgaagcggaag
aaggtcgtcagcgacgactccgacagcagctcgagcgacctgatgtcccgcctcaaggcc
aaaaccgtcaccagcaagaaaaccaagagctgggacgaggacgacagcttccagctctcg
gaccaggaggccgccgcccccctggcggggcgagacaagcccgcccgggcccggaaaccg
gtgacctacaagctgcagtccgactcggactcagacgacctttaa
DBGET
integrated database retrieval system
