Pungitius pungitius (ninespine stickleback): 119213304
Help
Entry
119213304 CDS
T07626
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppug01002
]
119213304 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119213304 (usp42)
Enzymes [BR:
ppug01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119213304 (usp42)
Peptidases and inhibitors [BR:
ppug01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119213304 (usp42)
Ubiquitin system [BR:
ppug04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119213304 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
119213304
NCBI-ProteinID:
XP_037320413
LinkDB
All DBs
Position
21:1274932..1283572
Genome browser
AA seq
1132 aa
AA seq
DB search
MTIVDRASEKSDHESVGCKRSPFTSGDVGMDGSCSSSWAMGPSMSGDSPRLKSAGGCLGP
TPGAAVYNSTPSSGDRPKEQVMSGGDGIESPQKVLFLQERLNLKWTQVHRIGAGLQNMGN
TCFLNSALQCLTYTPPFTNYLLTREHSKTCHEPGFCMMCTMQNHIIQVFANSGNVIKPIG
VLNELKRIAKHFRYGSQEDAHEFLRYTVDSMQKSCLPGTKLDRQTQATTFIHQVFGGYLR
SRVKCLNCKAVSDTFDPFLDITLEIKTAPSVSKALEQFVKPEQLDGENAYKCTKCKKMVT
ASKRFTIHRSSNVLTLSLKRFANFSGGKITKDVKYPEFLDLRPFTSQSQGEPLVYGLYAV
LVHSGFSCHAGHYFCYVKASNGQWYQMNDSSVSVSDIRSVLNQQAYVLFYVKSREVKRAG
DYSHMSHNPGVPGQSSPRPVVIPRINMGFIGPQLPPHMTKRNLHLNGNGSLRDYPTNSKP
STSVVGKPNHGPASSSSSISNSISRPTMIPDHDKRQKLSFFIGQGKLNRPLSSSSSSSSS
SHSQPSSASSSCSSSSLSSSQSTSDVRFVPRQLHHGNGVSRSNGDHHTGGNGASFLVPYG
QESSEESDQENCGSLAASHFNGNKRTGAAFDQSARATNGLSGAHHHGNGLNGPTNGVSEP
SQNGHHYEHHKVNGHNPPDKAVTPVAANGLDREHSQTSEEAHNSSSSKASPSQSVHPASS
ESHLLSPPDTRANDVSEPLPRDAASSAVSAPPAATPTKTHPVSSKEAASPAARRCDPTTF
SITPDCSQKNDGVSAAPQKVCSGGEEARDSPPTCNASAGAERRRDSDSKEKHRSKPSSIG
KEERERDRSHADRDRDRDRPYRDRSHRRDPRDHHHQRPYQQRFPPHSRPYRDRESERSLQ
HSRERDRCSNHYHHSHSRRYKEERDRRGHGCPPRERSHDRGRWRPDSRDRSSAGERGRYP
SKEEPETSTKSKGSPTQARRSTSQSADPQREESSEARRSRKHKKSKKKKKSRDKDRRRDS
GSSEVDSDRANETKKRRKKKKRARSGEPRGLGAARRQSSRSSEEKESRKRRHDDAKEAQR
GRVFLPEKRRCTDYTGPLSATNGSSHHHLNGHRATGGSPPPKSASQTPHAWK
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagagcttcagaaaagtctgaccacgagtcagtcgggtgtaagcgc
tctcccttcaccagtggagacgtggggatggacggcagctgttccagcagctgggcgatg
ggtccctccatgtccggcgactctccgaggctgaagtccgctggaggctgcctgggccca
acgcccggggccgcagtctacaacagcacaccctcctcgggggaccggcccaaggagcaa
gtaatgagtggtggtgatggcattgagtcgccccagaaggtgcttttccttcaagagcgg
ctcaacctaaagtggactcaggttcaccgcattggtgcaggcctgcagaacatggggaac
acctgctttctcaactcagccctgcagtgtctcacttacacacctccttttactaactat
ttgctgactcgggagcactccaaaacatgtcacgagccggggttctgtatgatgtgcacc
atgcaaaaccatatcattcaggtttttgcaaactctggaaacgtcattaagcccattggt
gtgctgaatgagctcaaaaggattgctaagcacttccgctatggaagccaggaggatgcc
cacgagttcctgcggtacacagtggactctatgcaaaagtcctgcttacctggaaccaaa
ttggaccggcaaacgcaggcaaccactttcatccatcaggtatttggcggctaccttcgg
tccagagttaaatgtttaaactgcaaagcagtctctgatacattcgacccttttctagat
attactctggaaattaagacggctcccagtgtctccaaggctctggagcagttcgtcaag
cctgaacagctggatggagaaaatgcctacaaatgcaccaagtgcaaaaaaatggtcacg
gcctccaagagattcaccatccaccgcagttcaaatgtgctcaccctctcactcaaacgc
tttgcaaacttcagtggaggcaaaatcacaaaggatgtgaaatatccagagttcctggac
ctgcggcccttcacgtctcagtctcaaggggagcccctggtctacgggctgtatgctgtg
ctcgtccactcgggattcagctgtcacgctggacactacttctgctacgttaaggccagc
aatgggcagtggtatcagatgaacgactcgtccgtgtcagtcagcgacatccgctccgtc
ctcaaccagcaggcctacgtccttttctacgtcaagtcccgtgaagtgaaacgagcaggc
gactacagccacatgagccataacccaggcgtccctggtcagtcttctccacggccggtg
gtgataccacggatcaacatgggcttcataggtccacagctgcccccacacatgaccaag
cgcaatctccaccttaatgggaatggatctctgagggactatcccaccaactccaagccc
agcaccagtgttgtgggcaaacctaaccacggaccggcctcttcctcttcttccatctcc
aactcaatcagccggcccacaatgatcccggaccacgacaagcgccagaaactttccttc
ttcattggacaaggcaaactgaaccgcccgttgtcctcgtcttcgtcgtcctcgtcctcc
tctcacagccagccgtcctctgccagcagcagctgctcctccagctctttatcctcctca
cagtctacctcagacgttcgcttcgttccacgtcagcttcaccacggtaacggcgtgtcc
cgcagtaacggggatcaccacacgggagggaacggagcgtccttcttggtgccgtacggc
caagagtcttcggaggaatcggaccaggagaactgtggctctctggcggcgtcccacttt
aatggcaacaagcgaacgggagccgcctttgaccaatccgctcgagccaccaatggactg
tcaggagcgcaccaccatggcaacggattaaacgggccaaccaatggcgtctccgaaccc
agtcagaacggacaccactatgaacaccacaaagtgaacggacacaacccccccgataaa
gctgtgactcctgttgctgctaatggactagaccgtgagcacagtcaaacaagtgaagag
gcgcataattcctcctcatccaaggccagtccttctcagagtgtccaccctgcgtccagt
gaaagtcacctcctctcccctccggacacgagggctaacgacgtgtctgaacccctccct
cgggatgcagcgtcctctgccgttagcgctccgcccgccgctactccaacaaagacccac
cccgtctcgtctaaagaggccgcttcccccgcggctcgccgttgcgaccctacgaccttc
tccatcacgccggactgctcccaaaaaaacgacggggtctctgcagcgccacagaaggtc
tgcagcggtggggaggaagcgagagattcaccaccgacctgcaatgcgtccgcaggagct
gaaagacgcagagattctgattccaaggaaaaacaccggtccaagcccagttcaataggc
aaagaagagcgcgagagagaccgatcgcacgctgaccgggacagagaccgggacagaccc
tacagggaccggagtcacaggcgggaccccagagaccaccaccaccagcggccgtaccag
cagcgctttcctcctcacagccgcccctacagggaccgggagtccgagcgcagcctccag
cactcgagggagcgcgaccgatgctccaatcattaccaccactctcacagccgccgctac
aaagaggagcgggaccggaggggacacggctgcccccccagggagaggtctcacgatcga
gggaggtggcggccagacagcagggacaggagcagcgccggagagaggggccgctatccg
tcaaaagaagagcctgaaacctccacaaagtccaagggctcgcccactcaggcccgtcgc
tccacgtcccaatcggctgatcctcagagggaggagagctccgaggcgcggcgctccaga
aaacacaaaaagagcaagaaaaagaagaagtcgagggataaggaccggcgccgtgacagc
ggaagctccgaagtggattcagaccgagccaatgaaacgaagaagaggaggaaaaagaag
aagcgggcgcggagcggcgagccgcgcggcctgggagcagctcgccgccagagcagcaga
agcagcgaggagaaggagagccgcaagcgtcgccacgacgacgccaaggaggctcagcgc
ggccgcgtgtttctgccagagaagcggcggtgcaccgactacacgggtccgctctccgcc
accaacggttcaagccaccaccatctcaacggacacagagccactggaggctccccccct
cccaagtcggcctcacagaccccccacgcgtggaaataa
DBGET
integrated database retrieval system
