Pungitius pungitius (ninespine stickleback): 119213304
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Entry
119213304 CDS
T07626
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppug01002
]
119213304 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119213304 (usp42)
Enzymes [BR:
ppug01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119213304 (usp42)
Peptidases and inhibitors [BR:
ppug01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119213304 (usp42)
Ubiquitin system [BR:
ppug04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119213304 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
119213304
NCBI-ProteinID:
XP_037320413
LinkDB
All DBs
Position
Unknown
AA seq
1145 aa
AA seq
DB search
MTIVDRASEKSDHESVGCKRSPFTSGDVGMDGSCSSSWAMGPSMSGDSPRLKSAGGCLGP
TPGAAVYNSTPSSGDRPKEQVMSGGDGIESPQKVLFLQERLNLKWTQVHRIGAGLQNMGN
TCFLNSALQCLTYTPPFTNYLLTREHSKTCHEPGFCMMCTMQNHIIQVFANSGNVIKPIG
VLNELKRIAKHFRYGSQEDAHEFLRYTVDSMQKSCLPGTKLDRQTQATTFIHQVFGGYLR
SRVKCLNCKAVSDTFDPFLDITLEIKTAPSVSKALEQFVKPEQLDGENAYKCTKCKKMVT
ASKRFTIHRSSNVLTLSLKRFANFSGGKITKDVKYPEFLDLRPFTSQSQGEPLVYGLYAV
LVHSGFSCHAGHYFCYVKASNGQWYQMNDSSVSVSDIRSVLNQQAYVLFYVKSRDVKRAG
DYSHMSHNPGVPGQSSPRPVVIPRINMGFIGPQLPPHMTKRNLHLNGNGSLRDYPTNSKP
STSVVGKPNHGPASSSSSISNSISRPTMIPDHDKRQKLSFFIGQGKLNRPLSSSSSSSSH
SQPSSASSSCSSSSLSSSQSTSDVRFVPRQLHHGNGVSRSNGDHHTGGNGASFLVPYGQE
SSEESDQENCGSLAASHFNGNKRTGAAFDQSARATNGLSGAHHHGNGLNGPTNGVSEPSQ
NGHHYEHHKVNGHNPPDKAVTPVAANGLDREHSQTSEEAHNSSSSKAIPSQSVHPASSES
HLLSPPDTRANDVSEPLPRDAASSAVSAPPAATPTKTHPVSSKEAASPAARRCDPTTFSI
PPDCSQKNDGVSAAPQKVCSGGEEARDSPPTCNASAGAERRRDSDSKENHRSKPSSRGKE
VQTYRERERDRSHADRDRDRDRPYRDRSHRRDPRDHHHQRPYQERFPPHSRPYRDRESER
SLQHSRERDRCSNHYHHSHSRRYKEERDRRGHGCPPRERSHDRGRWRPDSRGSRGSRERS
SAGERGRYPPKEEPETSTKSKGSPTQARRSTSQSADPQREEREESSEARRSRKHKKSKKK
KKSRDKDRRRDSGSSEVDSDRANETKRRRKKKKKRARSGEPRGPGAARRQSSRSSEEKES
RKRRHDDAKEAQRGRVFLPEKRRCTDYTGPLSATNGSSHHHLNGHRATGGSPPPKSASQT
PHAWK
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagagcttcagaaaagtctgaccacgagtcagtcgggtgtaagcgc
tctcccttcaccagtggagacgtggggatggacggcagctgttccagcagctgggcgatg
ggtccctccatgtccggcgactctccgaggctgaagtccgcgggaggctgcctgggccca
acgcccggggccgcagtctacaacagcacaccctcctcgggggaccggcccaaggagcaa
gtaatgagtggtggtgatggcattgagtcgccccagaaggtgcttttccttcaagagcgg
ctcaacctaaagtggactcaggttcaccgcattggggcaggcctgcagaacatggggaac
acctgctttctcaactcagccctgcagtgtctcacttacacacctccttttactaactat
ttgctgactcgggagcactccaaaacatgtcacgagccggggttctgtatgatgtgcacc
atgcaaaaccatatcattcaggtttttgcaaactctggaaacgtcattaagcccattggt
gtgctgaatgagctcaaaaggattgctaagcacttccgctatggaagccaggaggatgcc
cacgagttcctgcggtacacagtggactctatgcaaaagtcctgcttacctggaaccaaa
ttggaccggcaaacgcaggcaaccactttcatccatcaggtatttgggggctacctacgg
tccagagttaaatgtttaaactgcaaagcagtctctgatacattcgacccttttctagat
attactctggaaattaagacggctcccagtgtctccaaggctctggagcagttcgtcaag
cctgaacagctggatggagaaaatgcctacaaatgcaccaagtgcaaaaaaatggtcacg
gcctccaagagattcaccatccaccgcagttcaaatgtgctcaccctctcactcaaacgc
tttgcaaacttcagtggaggcaaaatcacaaaggatgtgaaatatccagagttcctggac
ctgcggcccttcacgtctcagtctcaaggggagcccctggtctacgggctgtatgctgtg
ctcgtccactcgggattcagctgtcacgctggacactacttctgctacgttaaggccagc
aatgggcagtggtatcagatgaacgactcgtccgtgtccgtcagcgacatccgctccgtc
ctcaaccagcaggcctacgtccttttctacgtcaagtcccgtgacgtgaaacgagcaggc
gactacagccacatgagccataacccaggcgtccctggtcagtcttctccacggccggtg
gtgataccacggatcaacatgggcttcataggtccacagctgcccccgcacatgaccaag
cgcaatctccaccttaatgggaatggatctctgagggactatcccaccaactccaagccc
agcaccagtgttgtgggcaaacctaaccacggaccggcctcttcctcttcttccatctcc
aactcaatcagccggcccacaatgatcccggaccacgacaagcgccagaaactttccttc
ttcattggacaaggcaaactgaaccgcccgttgtcctcgtcgtcctcgtcctcctctcac
agccagccgtcctctgccagcagcagctgctcctccagctctttatcctcctcacagtct
acctcagacgttcgcttcgttccacgtcagcttcaccacggtaacggcgtgtcccgcagt
aacggggatcaccacacgggagggaacggagcgtccttcttggtgccgtacggccaagag
tcttcggaggaatcggaccaggagaactgtggctccctggcggcgtcccactttaatggc
aacaagcgaacgggagccgcctttgaccaatccgctcgagccaccaacggactgtcagga
gcgcaccaccatggcaacggattaaacgggccaaccaatggcgtctccgaacccagtcag
aacggacaccactatgaacaccacaaagtgaacggacacaacccccccgataaagctgtg
actcctgttgctgctaatggactagaccgtgagcacagtcaaacaagtgaagaggcgcat
aattcctcctcatccaaggccattccttctcagagcgtccaccctgcgtccagtgaaagt
cacctcctctcccctccggacacgagggctaacgacgtgtctgaacccctccctcgggat
gcagcgtcctctgccgttagcgctccgcccgccgctactccaacaaagacccaccccgtc
tcgtctaaagaggccgcttcccctgctgctcgccgctgcgaccctacgaccttctccatc
ccgccggactgctcccaaaaaaacgacggggtctctgcagcgccacagaaggtctgcagc
ggtggggaggaagcgagagattcaccaccgacctgcaatgcgtccgcaggagctgaaaga
cgcagagattctgattccaaggaaaaccaccggtccaagcccagttcaagaggcaaagaa
gtacaaacttaccgagagcgcgagagagaccgatcgcacgctgaccgggacagagaccgg
gacagaccctacagggaccggagtcacaggcgggaccccagagaccaccaccaccagcgg
ccgtaccaggagcgctttcctcctcacagccgcccctacagggaccgggagtccgagcgc
agcctccagcactcgagggagcgcgaccgatgctccaatcattaccaccactctcacagc
cgccgctacaaagaggagcgggaccggaggggacacggctgcccccccagggagaggtct
cacgatcgagggaggtggcggccagacagccgaggatcgcggggcagcagggagaggagc
agcgccggagagaggggccgctatccgccaaaagaagagcccgaaacctccacaaagtcc
aagggctcgcccactcaggcccgtcgctccacgtcccaatcggctgatcctcagagggag
gagagggaggagagctccgaggcgcggcgctccagaaaacacaaaaagagcaagaaaaag
aagaagtcgagggataaggaccggcgccgtgacagcggaagctccgaagtggattcagac
cgagccaatgaaacgaagaggaggaggaagaagaagaagaagcgggcgcggagcggcgag
ccgcgcggcccgggagcagctcgccgccagagcagcagaagcagcgaggagaaggagagc
cgcaagcgtcgccacgacgacgccaaggaggctcagcgcggccgcgtgtttctgccagag
aagcggcggtgcaccgactacacgggtccgctctccgccaccaacggttcaagccaccac
catctcaacggacacagagccactggaggctccccccctcccaagtcggcctcacagacc
ccccacgcgtggaaataa
DBGET
integrated database retrieval system
