Pungitius pungitius (ninespine stickleback): 119213346
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Entry
119213346 CDS
T07626
Symbol
eme1
Name
(RefSeq) crossover junction endonuclease EME1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03440
Homologous recombination
ppug03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119213346 (eme1)
03460 Fanconi anemia pathway
119213346 (eme1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119213346 (eme1)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
119213346 (eme1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EME1-MUS81_C
ERCC4
Motif
Other DBs
NCBI-GeneID:
119213346
NCBI-ProteinID:
XP_037320479
LinkDB
All DBs
Position
21:complement(10801848..10806499)
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AA seq
524 aa
AA seq
DB search
MGSYSDSTSDLDEALPVFDFLHRASQSRHGEPNADAAASAPKGPRATHVMTISSDSDDGE
PYVPLAQRLQQRRDDAARGDAERRLPSNPVHAPERPPGLHQERSSDRGVSPGGAEETGLP
CRRQPPADTSPVRRKPSTRTQEEVRASREEALRRRQAREGQQRDKEALRREQDRQKAERK
ALAEAAKALRPEECIKHMVVAVDPALLQLEGGGTLLAAVQALGCSCAVEKQAVPRSVSWM
RRAPSAQPGDGGGVPEAHVVMQITVDDFITLVHGYVQEGRRGRCDATPTLTSWVQEQQRR
HVGKLLSLAVIDLEKYFRAQKSQSQKRLRQAVAGEQRGAGKARKRKKSGGDEARPEVSRV
DVEEAVVHLQLHTGVSVRFLSTWKDFSDHIAMTTRAVAEAPFKREREKTGFSFHLESEWA
GGQRSDRDGKGLLQVWKRQIQQLNRVSPDMASAILAAYPSPQLLAQAYDLCGGDGERLSL
LSDLVIRRGEGVTSTTRRVGPELSKRLFLLMSSREPQRALDATV
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgggcagctacagtgactccaccagtgacctggatgaggcgttgcctgtgtttgacttc
ctccaccgggcctcacagagccgacacggggaaccgaatgcggacgccgcggcctctgcg
ccaaagggcccgagggcgacgcatgtgatgacgatcagcagcgattcggatgacggcgaa
ccttatgtccctttggcgcagcgactccagcagaggcgagacgacgcggcgaggggagac
gccgagcgccgcttgccatccaatccggtccacgcgccagagcgtccgcccggcctccac
caggagagatcatcagatcgaggggtctcacctggtggagcggaggagacgggtctcccg
tgccgacggcagcctcccgctgacacctctcccgtcaggaggaaaccctccacgcgaacg
caggaggaggtccgggcctcccgggaggaggctctgcggaggaggcaggcccgggaggga
cagcagagggacaaggaggccctgaggcgggaacaagaccgacagaaagcagagaggaaa
gctctggccgaggcggctaaggccctgcggcccgaggagtgcatcaagcacatggtggtg
gccgtggacccggccctcttacagctggagggaggcggcactctgctggcggcggtgcag
gccctcggctgcagctgcgccgtcgagaaacaagccgtcccacgcagcgtcagctggatg
aggagggcccccagtgcacagccaggcgacggaggcggcgtgccagaggcccacgtggtg
atgcagatcacggttgacgacttcatcactctagtccacggctacgttcaggaggggagg
cgtggccgctgcgacgccaccccgaccctgacgtcctgggtgcaggagcagcagaggcgt
cacgtcgggaagctcctcagcctggcggtcatcgacctggagaaatacttcagagcccag
aagtctcagagccagaagcgcctccggcaggcggtcgctggtgagcagcgaggggcgggg
aaagccaggaagaggaagaagagcggcggggacgaggcgcgacccgaggtgtcgcgagtg
gatgtggaggaggcggtggtgcacctccagctccacaccggcgtctccgtccgcttcctg
tcgacgtggaaggacttctccgatcacatcgccatgacgaccagagcagtcgccgaagcc
cctttcaagcgagagagggagaagacgggcttctcgttccacctggagagcgagtgggcg
ggggggcagcggtcggacagagacgggaagggcctcctgcaggtgtggaagagacagatc
caacagttgaacagggtcagtccggacatggcctcggccatcctggcagcttacccctcc
cctcagctgctggcccaggcctacgacctctgcgggggcgacggcgagcggctctccctg
ctgtccgacctggtgatccgccgaggagaaggcgtcacgtcgacgacccgccgcgtgggc
cccgagctttccaagcgcctcttcctcctcatgagctcccgcgagcctcagcgggccctg
gacgccaccgtgtga
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