Pungitius pungitius (ninespine stickleback): 119213773
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Entry
119213773 CDS
T07626
Symbol
six2a
Name
(RefSeq) homeobox protein SIX2a
KO
K19472
homeobox protein SIX2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119213773 (six2a)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
119213773 (six2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
119213773
NCBI-ProteinID:
XP_037320724
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All DBs
Position
13:4075352..4077938
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AA seq
290 aa
AA seq
DB search
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENNENSNGNSHNPLTSSMNGNKSLLGSSDDDKSPSGTPDHTSSSPALLLGSNS
GLQSLHGLGPPPGPSAIPVLGGVDSVHHHHSLHHDTILNPMSSNLVDLGS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgctcccgacgtttggttttacgcaggagcaagtggcgtgcgtttgcgaagtt
ctccagcaaggggggaacatcgagcggctggggcgcttcctctggtccctgccggcgtgc
gagcacctccacaaaaacgagagcgtcctcaaagcgaaagccgtggtcgctttccaccgg
gggaactttcgagagctctacaagatcctggagagccaccagttctcgccgcacaaccac
ccgaagctgcagcagctgtggctcaaagcgcactacatcgaggcggagaagctgcggggc
cgtccgctcggggccgtggggaagtaccgcgtccggagaaagttccccctgccgcgctcc
atctgggacggagaggagaccagctactgcttcaaggagaagagcaggagcgtgctgcgg
gagtggtacacccacaacccgtacccgtccccgcgggagaagagggagctggccgaggcc
acgggactcaccaccacgcaagtcagcaactggttcaagaaccgccggcagcgggaccgg
gcagcggaggcgaaggagagggaaaacaacgagaactccaacggcaatagtcacaaccca
ttgacttcttccatgaatggaaataaatctcttttggggagctcagacgacgataaaagc
ccctccgggacaccggaccacacgtcctcgagcccggctctgctgctcggctcaaactcc
gggctacagtccctgcacggcctcgggcccccgccggggcccagcgccatcccggtactc
ggcggcgtggactcggtgcaccaccaccactcgctgcaccacgacaccatactgaaccct
atgtcttcgaatctagtggacctcggctcttaa
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