Pungitius pungitius (ninespine stickleback): 119213774
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Entry
119213774 CDS
T07626
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
119213774
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppug02000
]
119213774
Transporters [BR:
ppug02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
119213774
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Paralog
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Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
119213774
NCBI-ProteinID:
XP_062422622
LinkDB
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Position
13:3614499..3619597
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AA seq
564 aa
AA seq
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MGVNVPGLTALMLFYLLVLGVGIWASVKSKREARKSAADKIEMALLGNRGIKKAVGIFTM
TATWVGGCFIMGITEMIYTPSMGLVAVAVLLAAFSCSFIFGGLALVKPMRHCNYVTMLDP
FQIKYGKAFAALQALVALLSDVLWLTATLISLGATMNVILDVPYSASIWISAAVVILYTL
LGGFYSVAYTDVVQVVLILVTMSICLPFVLINPTSVSISQTALNYTFQAPWIGKLERNFD
WTAIDTFLFVALGGVGSQAFHQRTLSAASTSAARTTCFVAALTILIFGIPPILFGAVAAS
TDWNLTSYGSPSPLERGEAAMVLPIVLSHLTPTFVSVVGTAAISAAVMSSADSALLSIAS
LFTCNIYKTLLRPQASQREIQWLIRAAVVVAGLTGASLANLKNSIIMLVFLGSEVGYTLI
FPQLVCVLFFDVSNIHGAVSGWLTGLLLRMLSGEPSLGVAPVIHFPGCTLEDGTYVQHSP
VRTIAVLSAIAANLLFSHMASVLFNKGLLPQKWDTCKVKAQNSAAGTRPADDSGRDKEEE
TLGEMESPRDVSQPMITTTRLSVQ
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtcaacgttcctggattgacagcattgatgctcttctacctgctggtgctcgga
gtcggcatctgggcttctgtcaagtccaaaagggaggcgcgcaaaagtgcagccgacaaa
attgagatggctctgctggggaaccgaggcatcaagaaggccgtggggatcttcacgatg
acagccacgtgggtcggaggctgcttcatcatgggcataactgagatgatctacaccccc
tccatgggacttgtagcggtggcggtcctcttggcggctttttcttgttcgtttattttc
ggtggcctcgccttggtgaagcccatgagacactgcaattatgtgaccatgttggacccc
ttccaaatcaagtatggaaaagcgttcgcggcccttcaagccctggtcgccctgctgagt
gatgttttgtggttgactgcaacgctcatcagcttaggcgccacgatgaacgtgatcttg
gacgtaccttactccgcgagcatctggatctcggccgccgtggtgattctctacacgctg
ctgggcggcttctactccgtggcgtacacagacgtcgtgcaggtcgtcctcattctcgtc
accatgtctatctgtttaccgtttgtcctgataaatcccacctctgtgagtataagtcag
acggccctgaactacactttccaggcgccgtggatcggtaaactggagaggaattttgat
tggaccgccatcgatactttcttattcgtggcactaggaggtgtgggatcccaagctttc
caccagaggaccttgtccgctgcctccacgtcggcagccaggaccacgtgctttgttgca
gccctcaccatcttgatttttggaatacctcccattctgtttggggcagtggctgcatcc
acagactggaacctcacctcttacggctctccgtccccgctggaacgcggcgaggcagcc
atggtcctgcccatcgtcctgagccacctcaccccgaccttcgtctccgtcgtcggaacc
gcggccatttccgccgccgtcatgtcgtcggccgactctgctttgctctccatagcctcc
cttttcacttgcaacatttacaagactctcctgaggccacaggcctcgcagagagaaatc
caatggttgatccgtgccgcggtggtcgtggcaggcctgacgggcgcgtcgctcgccaac
ctcaagaacagcatcatcatgttggtgttcctcgggagtgaggtgggctacacactgatc
ttcccccagctcgtctgcgtcctcttttttgacgtgtccaacatccacggggctgtctcg
ggctggctcacggggttgctgttgagaatgctgagcggcgagccgtctctgggtgtggcg
ccagtcatccactttccgggatgcactctggaggacggcacctacgtccagcactccccc
gtgaggaccatcgccgtgctgtctgccatcgctgccaacttgctgttctcccacatggcg
tccgtgctattcaacaaggggctgctgccgcagaagtgggacacgtgcaaagtgaaagcc
cagaactcggcggcggggacgagaccagccgacgacagcgggagagacaaagaggaggaa
acactgggtgaaatggaatccccccgagatgtgtctcagccgatgattaccaccacaagg
ctgtctgtgcagtaa
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