Pungitius pungitius (ninespine stickleback): 119213887
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Entry
119213887 CDS
T07626
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ppug04054
]
119213887
Pattern recognition receptors [BR:
ppug04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119213887
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
WHD_NOD2
PRY
SPRY
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
119213887
NCBI-ProteinID:
XP_037320992
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All DBs
Position
13:complement(3205132..3212701)
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AA seq
1127 aa
AA seq
DB search
MNQCEDPEEGVRPSEAPLCGDHGSQNKAQRNHQGTQPGPGPESGPEPSCVSMKSNRSIGL
FPNFKNVPPSVDESSPSCVSTKSDWCKDVENYFKDQQRSYDPEEHHSAQQHPPHLDSIFM
NILLQMLEENILTFMKNELNMIQKVLNRDYTECLESQRENEESLDSEDDEQRRTKEAFLK
IAVHFLRRMKQEELADCLERRLLAAVCQRELKSNLKKKFQCVFEGIAKAGNPNLLNEIYT
ELYITEGGTAEVNEEHEIRQIETPSRKPHRPENPIRQEDLFKASAGGEEPIRTVMTKGVA
GIGKTVLTQKFTLDWAEDKHHQDIQFTFPFTFRELNMLREKKYSLVELVHHFFSETRAAG
ICRFEEFQVVFIFDGLDECRLPLDFHNNEILTDVTESSSVDVLLTNLIRGKLLPSARLWI
TTRPAAANQIPPECVGMVTEVRGFTNPQKEEYFRKRFRDEEHASRIISHIKISRSLHIMC
HIPVFCWITATVLEELLKSREGGELPKSLTEMYIHFLVVQAKVKKVKYDGGVETDPHWCP
ESRKMIESLAKLAFDQLQKGNLIFYEPDLTECGIDIRAASVYSGVFTQIFREERGLYQDK
VFCFVHLSVQEFLAALHVHLTFFNSGVNLLSEEQTTSLVSNDTPKPKRLYKSAVDKAVQS
LNGHLDLVLRFLFGLSLPTNQNLLRGLLTQTEISPKTNRGTVQYIKDTISEDVSPEKSIN
LFHCLNELNDSSLVKEIQRSLSSGRLSTDELYPAQWSALVFILLSSEEDLDVFDLKKYSA
SEKALLRLLPVVKASNKALLDRCNLSEKSCEALSSVLSSRSSRLRELDLSNNDLEDSGVK
LLSAGLENPHCELETLRLSGCMITEEGCASLASALRSNPSHLRELDLRYNHPGDSGVKLL
FAELEDPHRTLETLRVEPAGARCVRPGLKKYSCELTIDTNTVHRELQLSDHNRKVTYVEK
EVQSYPDHPDRFDFRPQLLCTTGLTGRCYWEVEWRGRVTVSVSYRGIGRKRGSEDCSFGW
NDQSWSLRCSDEGYYVRHNKTGKHINDDSSSGRVAVYLDSPAGSLSFYKVSPDTLIHIHT
FSATFTEPLYPGFRFSSWSCSGSSMSLCSLQEGESPPGGEPSSLLTT
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagtgtgaggacccagaggagggagtccgtccctctgaagcccctctgtgtggg
gaccatggcagccagaacaaagctcagaggaaccatcagggaacacaacctggacccggt
cctgaatccggacccgaacccagctgtgtgtccatgaagagcaaccggtctattggtctt
tttccaaacttcaaaaacgtccccccctcggtagatgaaagttcacccagctgtgtgtcc
acgaagagtgattggtgtaaagatgttgaaaattacttcaaagatcaacaacgttcttac
gacccagaagaacatcactctgcccagcagcatcctccccacctggactccatatttatg
aatattctgttgcagatgctggaggagaacatactcacttttatgaagaacgagctgaat
atgatccagaaggttttgaatcgagattacacagaatgcttagagagtcagagggagaat
gaggagtcgctggatagtgaggatgatgagcagaggaggaccaaagaggcatttctgaag
attgcagtgcacttcctcaggagaatgaagcaggaggagctggctgactgtctggagaga
agacttcttgctgcggtttgtcagcgtgaactcaaatccaacctgaagaagaagttccag
tgtgtgtttgagggcatcgctaaagcaggaaacccaaaccttctgaatgagatctacaca
gagctctacatcacagagggagggactgcagaggtcaatgaagaacatgagatcagacag
attgaaacaccatccaggaaaccacacagaccagaaaaccccatcagacaagaagacctc
tttaaagcctcagctggaggagaggaaccaatcagaacagtgatgactaagggagtggct
ggcattggaaaaacagtcttaacacagaagttcactctggactgggctgaagacaaacac
caccaggacatacagttcacatttccattcaccttcagagagctgaacatgctgagggag
aagaagtacagcttggtggaacttgttcatcacttcttcagtgaaaccagagcagcagga
atttgcaggtttgaagagttccaggttgtgttcatctttgacggtctggacgagtgtcga
cttcctctggacttccacaacaatgagatcctgactgatgtcacagagtcctcctcagtg
gatgtgctcctcacaaacctcatcagggggaagctgcttccctctgctcgcctctggata
accacacgacctgcagcagccaatcagatccctccagagtgtgttggcatggtgacagaa
gtcagagggttcaccaacccccagaaggaggaatacttcaggaagaggttcagagatgag
gagcacgccagcaggatcatctctcacatcaagatctcacgaagcctccacatcatgtgc
cacatcccagtcttctgctggatcactgctacagtcctggaggagctgttgaagtccaga
gagggaggagagctgcccaagagcctgactgagatgtacatccacttcctggtggttcag
gccaaagtgaagaaggtcaagtacgatggaggagttgagactgatccacactggtgtccc
gagagcaggaagatgatcgagtctctggcaaaactggcctttgatcagctgcagaaaggc
aacctgatcttctatgaacctgacctgacagagtgtggcatcgatatcagagcagcctca
gtgtactcaggagtgttcactcagatctttagagaggagagaggactgtaccaggacaag
gtgttctgctttgtccatctgagtgttcaggagtttctggctgctcttcatgtccatctg
accttcttcaactctggtgtcaatctgctgtcagaagaacaaacaacctccctggtatct
aatgacacacctaaaccaaaacgtctctacaagagtgctgtggacaaggccgtacagagt
cttaatggacacctggacttggtcctccgctttctcttcggtctttcactgccgaccaat
cagaatctcctacgaggtctgctgacacagacagaaatcagcccaaagaccaatcgggga
acagtccagtacatcaaggatacgatcagtgaggatgtgtctccagagaaaagcatcaat
ctgttccactgtctgaatgaactgaatgatagttctctagtgaaggagatccaacggtcc
cttagttcaggacgtctctccacagatgaactgtatcctgctcagtggtcagctctggtc
ttcatcttactgtcatcagaagaagatctggacgtgtttgacctgaagaaatactccgct
tcagagaaggctcttctgaggctgctgccagtggtcaaagcctccaacaaagctctactg
gaccgctgtaacctctcagagaagagctgtgaagctctgtcttcagttctcagctcccgg
tcctctaggctgagagagctggatctgagcaacaacgacctagaggattcaggagtgaag
cttctgtctgctggactggagaatccacactgtgaactggaaacgctcaggctgtcaggc
tgtatgatcacagaggaaggctgcgcttctctggcctcagctctgcgctccaacccctcc
cacctgagagagctggacctgagatacaatcatccaggagactcaggagtgaagctgttg
tttgctgaactggaggatccacaccggacactagaaactctcagggtggagcctgctgga
gcccgatgtgtgagaccaggtctgaagaaatattcctgcgaactcacaatcgacacaaac
acagtacacagagaactccaactgtctgaccacaaccggaaggtgacatatgtggagaag
gaggttcagtcatatcctgatcatccagacagatttgacttcaggcctcagctgctgtgt
acaactggtctgactggtcgctgttactgggaggtcgagtggagaggacgagttaccgta
tcagtgagttacagaggaatcgggagaaaaagaggcagtgaagactgttcgtttggctgg
aatgatcagtcctggagtctgagatgctctgatgaaggttactacgtccgtcacaataag
acaggaaaacacatcaacgacgactcctcctctgggagagtagctgtgtacttggactct
ccggctggctctctgtccttctacaaagtctcccctgacactctgatccacatccacacc
ttcagcgccacattcactgaacctctctatcctgggttcaggttctcgtcctggtcctgc
tccggttcctcaatgtctctgtgttctctgcaggagggagagtctcctcctggtggagaa
ccttcctctctgctcaccacatag
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