Pungitius pungitius (ninespine stickleback): 119213911
Help
Entry
119213911 CDS
T07626
Symbol
srfa
Name
(RefSeq) serum response factor a isoform X1
KO
K04378
serum response factor
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119213911 (srfa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119213911 (srfa)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
119213911 (srfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
119213911
NCBI-ProteinID:
XP_037321036
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MLPSRLGSAPSGNGSASGRGNTGHGLGIVGSGIRPVLVRAGQAVPGVCESDGRQGERDAV
GMLGANGPGGSRGVRPGNGTGMTPLQTAVQGNMVGMTAGVVLAHGARFEADRESAPLCSG
SDNDSDSAEDDDPVGSLGDSRRGVKRERGEMEPPGPGQEVGIPPGGYGMVPGGVAGAKPG
KKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTF
ATRKLQPMITSETGKALIQTCLNSPDSPPRSDPSTDQRMSATGFEETDLTYQVSESESMG
DTKDTLKPTFTVASLPGSTSSTQCTVPTTSTTMQVSSGSSFPITNYLAPVSASGNISANG
TVLKTAGGSAGVMQLPSGFTFMPAGTTLPPGTPTIPLSQLQHSLALQGQHGQALAAQQPQ
QGQQAVFRFPAAVSLAGAGVPQQLQAIQVHHNAQSGSNSDGSLDISHTSTNSTATVSLPA
TIVTSSMPTSVAGHMMYPSQHTVMYASTPTLTDGGLAVLNAFSQGTSAMQVSHAQGQDSG
GVPQVFLTAPQGTVQIPVSAVQLHPMVIGPQSSGSSSNLTELQVVNLDAAQNSKSD
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgagccggcttggatcggcaccatctggaaacgggtccgcttcaggcagaggt
aacacagggcacgggttggggattgtcggtagcggaatccgtcccgttttagtccgagca
gggcaagctgtaccgggggtctgcgagagtgacgggcgacagggggagagagacgctgtc
gggatgctgggggctaacggtccagggggttcgagaggtgtgagaccggggaacggcact
gggatgacccctttacagaccgctgtccagggcaacatggtggggatgaccgcaggagtc
gtgttggcgcacggagccaggttcgaggcggacagggagagcgcgcctctgtgcagcggc
tcggacaatgactctgactccgcagaggacgatgatccagtgggttcactgggggacagc
cggagaggggtgaagcgagagaggggggagatggaacccccggggccggggcaagaagtg
ggaataccccccggaggctacggcatggtccccgggggcgtcgctggggcaaaaccggga
aagaaaacacgtgggcgcgtcaagataaagatggaatttattgacaacaagttgagacgt
tacaccactttcagcaagaggaagactggtattatgaaaaaggcgtatgaactctccacc
ctgacggggacccaggttctgctgcttgtggccagtgagacgggtcacgtctacacgttc
gccacgcgcaaactccaacccatgatcacgagtgaaacgggcaaagctctgatccagacg
tgcctcaactcgccggactcgccgccgcgctctgacccctccacggaccagcgcatgagc
gccacgggcttcgaggagacggacctcacctatcaggtgtctgagtcggagagcatgggc
gacacaaaggatacactgaagcccacgttcacggtggccagcctaccgggcagtaccagc
agcacccagtgcaccgtgcccaccacctccaccaccatgcaggtgagcagcggctcgtcg
tttcccatcaccaactacctggctcccgtctcggcgagcggcaacatcagcgccaacggc
accgtcctcaagaccgccggcggctctgcgggggtcatgcagctgccgagcggcttcact
ttcatgcccgcaggcactactctcccccctggcactcccaccattcctctgagccagctg
cagcactccctggccctccaggggcagcatggtcaggcccttgctgcccagcagcctcag
cagggacagcaggctgtcttccgcttccctgccgctgtctccctcgcaggagcaggggtt
ccccagcagctccaggcgatccaggtacaccacaacgcccagtccggctccaacagcgac
ggcagccttgacatctcccacacctccacaaactccaccgcaacggtgagtctcccggca
accattgtcacctcgtcaatgccaacgtctgttgcgggtcatatgatgtaccccagccag
cacacagtgatgtatgcctccaccccgacgctgactgacggtgggctggcggtgctcaac
gccttttcccagggaacctcggccatgcaggtgtcccatgcacagggccaagactctggt
ggtgtccctcaggtgttcctcacagcaccccaaggcacggtgcagatccccgtttcagcg
gtgcagctacacccaatggtgattgggccgcagtcgagcggcagcagcagtaacctgacg
gagctccaggtggtcaacttggacgcagcacagaactcaaagagcgactga
DBGET
integrated database retrieval system
