Pungitius pungitius (ninespine stickleback): 119213932
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Entry
119213932 CDS
T07626
Symbol
nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04010
MAPK signaling pathway
ppug04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119213932 (nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
119213932 (nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119213932 (nfkb2)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
119213932 (nfkb2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
119213932
NCBI-ProteinID:
XP_037321081
LinkDB
All DBs
Position
13:complement(478291..489059)
Genome browser
AA seq
876 aa
AA seq
DB search
MAGALRMSEAPFNVYDNDLQMNLMQYDYIPPVDIKTEPYMPETAHGPYIQIIEEPKQRGF
RFRYECEGPSHGGLPGASSEKNRRTYPTVKINNYVGHARVEVQLVSHTDPPSVHAHSLVG
RHCTENGTCTLDIGPNDLAASFSNLGILHVTKKGVVEVLTRRLREERKRQKGPHCHLTDS
EENGLLKEAKELGKVMDLNIVRLKFTAYLQDSNGGFTRGLKPVVSNPIYDSKSPNASNLK
ISRMDKTCGTVLGGDEIFLLCDKVQKDDIEIRFYEEDEEGGWEAFGDFSPTDVHKQYAIV
FKTPPYHSTEIERPVTVFLQLKRKKAGDSSDPKQFTYTPQVQDKEEVLRKKQKPLPHYEP
WRGGGRGGGAGGFGGGAGGGGFQFNQQMNGGGGGGVFFTEGFTGFGGGAQMSGSNPQTGV
TQQQLIRLAAVLHSRASDSARQTAAALLQYCSTGDARVLLAIQRHLCGVQDGNGDTPLHL
AIIHQQTGVTQQLIHTLLSSQQQNILNTANHLQQTPLHLAVITRQVKVLEVLLRAGADPS
LLDKDGRNPLHLASLAGDTTTLRLLLAHLGERHAHLVNTPDYHGLHPLHLSVRRDGERCL
RLLVEGGAKINAPEQKSGNTALHLAVRENLFKVACTLITELKADVNATTFGGNTPLHLAA
GLGSPTLCSMLIAAGADKNMENDEPLFFPSSDEEEDEDEPIREQEACSQPINPLKRPARG
HTPSDLTRCRKVRNLLNSGLSPKSSLHSSKKMKSSSSEGGAASGVDEDTLSRLVELLSVG
DVPWRKLAEKLGMMTLTHLYLDSPTPCHQLLQHYQLGGGPVEGLVEALQSLGLTEGVRLL
RSSELRDDKHSTDATVDSGFGSQPIDEEEEPPVANQ
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagctctcaggatgagtgaagctccgttcaacgtgtacgacaacgacctgcag
atgaatttgatgcaatacgactacattcctccagtggacatcaagactgagccctacatg
cctgagacagctcatggtccttacatccagatcatcgaggagcccaaacagagaggcttt
cgtttccgctatgagtgcgaaggtccgtcccacgggggcctcccaggggcctccagcgag
aagaacaggagaacataccccaccgtgaagatcaataactacgtgggacatgcccgggtg
gaggtccagctggtgtcccacacggaccctcctagtgtccacgctcacagtctggtggga
cgtcactgcactgagaacgggacgtgcacgctggacatcgggcccaacgacctcgccgcc
tcattcagtaacctggggatcctccatgtgaccaagaaaggtgtggtggaggttctgacc
cggagactgagggaagagaggaagagacagaaaggacctcactgtcacctcacagattca
gaggagaacggcctcctgaaggaggccaaggagctgggcaaggtgatggacctgaacatt
gtcaggctgaagttcaccgcctacctgcaggacagcaacggaggcttcaccagaggcctg
aagcctgtggtctccaaccccatctacgacagcaagtcgcccaacgcctccaacctgaag
atctcccgcatggacaagacgtgcggcacggtgctcggaggagacgagatcttcctgctg
tgtgacaaggtccagaaagacgacatcgagatccgcttctacgaggaggacgaggaggga
ggctgggaggccttcggcgacttctcccctacagacgtccacaagcagtacgcaatcgtg
ttcaaaacgccgccctatcacagcacggagatcgagaggcccgtcaccgtcttcctgcag
ctgaagaggaaaaaggccggtgacagcagcgaccccaaacagttcacctacaccccccag
gtccaagacaaagaggaggtgctgaggaagaagcagaagccactgcctcactatgaaccc
tggagaggaggaggaagggggggaggtgctggggggttcggaggaggagctggaggagga
gggttccagttcaaccagcagatgaatggaggaggaggaggaggagtattcttcaccgaa
ggcttcacaggcttcgggggaggggctcagatgtcggggtctaaccctcagacaggggtc
acccagcagcagctgatccggctcgctgctgtcctccacagccgagcctctgacagcgcc
agacagacggctgctgccctgctgcagtactgcagcaccggggacgcccgcgtcctcctg
gccatccagagacacctctgtggcgtccaggacggaaacggagacacgcctttgcatctg
gccatcatccatcagcagacaggtgtgacgcagcaactgatccacactctgctcagtagc
cagcagcagaacatcctcaacacggccaaccacctccagcagactcctctccacttagcc
gtgatcacccggcaggtgaaggtgttggaggtgctgctaagggcgggggccgaccccagc
ctgctggacaaagatggtcgcaatcccctgcatcttgcatcgctagcaggagacaccacc
acgctgcgcctcctgctggctcacctgggagaacgccacgcccacctggtcaacaccccc
gactatcacggtctccatcctctccacctttctgtgaggagggacggcgagcgctgcctc
cgcctcctggttgagggcggagccaaaataaacgcacctgagcaaaagagtggaaacacc
gccctccacctggccgtgagggaaaacctgttcaaggtggcatgtactctcatcacagag
ttgaaggcggacgttaacgccaccacgtttggggggaacacgcctctgcacctggcggct
ggtctgggctcaccgaccctctgctccatgctcatcgctgcaggcgccgataaaaacatg
gagaacgacgagccgctcttcttcccctcttcagacgaggaggaagacgaagacgaacca
atcagagagcaggaggcctgctctcagccaatcaaccccctcaagagacccgcacgagga
cacaccccctcggacctcaccaggtgtcgcaaggtgaggaacctgttgaactctggactg
agtcctaagtccagtcttcacagcagcaagaagatgaagtccagcagcagtgaagggggg
gcggcgtcgggggtggacgaggacacgctgtcccgcctggtggagctgctgagtgtggga
gacgtcccctggaggaaactggcagagaagctggggatgatgacgttgactcacctttac
ctggacagcccgacaccctgccaccagctgctgcagcactaccagctgggtggaggtcca
gtcgaaggtctggttgaagctttgcagtctctcggtctgacagaaggagtcagactgctg
agaagcagcgagctacgagatgacaaacacagcacagacgccacggtcgacagcggcttc
ggcagccagccaatagacgaagaggaggagccgcctgtggccaatcagtga
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