Pungitius pungitius (ninespine stickleback): 119213959
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Entry
119213959 CDS
T07626
Symbol
nphp1
Name
(RefSeq) nephrocystin-1
KO
K19657
nephrocystin-1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ppug03037
]
119213959 (nphp1)
Cilium and associated proteins [BR:
ppug03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
119213959 (nphp1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
Sigma70_ner
BUD22
BSP_II
SPO11_like
hSH3
ANAPC15
NOA36
SH3_4
CENP-B_dimeris
RXT2_N
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
119213959
NCBI-ProteinID:
XP_037321154
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All DBs
Position
13:639413..646480
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AA seq
666 aa
AA seq
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MPLKRRGPLQLVQREVDELKKQLDSLLEDVRRRAGTTDQAFQRCQEVQLSAEKTQRTLMK
LTKADEPAPVGNYEQRKQAEETRLEDILKRVNGLSLELSPPGPSSAAGDESKEDDEDEDE
DEDEVEDKDSSDDDDEAAKPPSPPELLLYTALSDFTGEQEGDLSVQRGGVLRIITKTADG
WWLAQDANGNRGVVPKTYLKIGSGVDDEEEEDEEEEDEEEDNDDDEEEEEEDLSADGEEQ
SSPHSNWSTVRRALTEIDATDVLSAMGAIPSGFRPSFLTKLLVEEGVTHRGSHYVQPKLS
QSQLSFSDLFLDPDTGRVRARQVRTCVCFSLEGCTRIPSPGVGVHVLSRHVRLCAFDGSQ
VLSNIHTVRATYNPKNPKTWSFSPRTTGLLPALLDGDCFLRCNSPSPDLGLLFELGVTFI
RNSTGERGDLSCGWSFLKLSDDTGNPLPHRTFELMVNGGTPFEKDVKMEASAPRGPPAGV
FQQILQAHRRPKLILKLKSCGSETRTRLSLLPDALLHCLSCVQLLVLHRQLQADSLLLDR
PTMQDAGLISSPVLSTFPELLDQPDLLDALRSAWLDAESNMSRAQKRDLSYVKQRFIAVY
MASAFALLRSASLPPPRWADAPSEERRAGVIYAALDALIQAGRPAGPEVLAFDVEELTFD
LLLVAR
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgccgctaaaaagacgaggaccgctgcagctggtccagagagaagtggacgaactcaag
aagcagctcgacagtctgctggaggacgtgcggcgtcgggccggaaccaccgaccaggcc
tttcagagatgtcaagaagtgcagctgtcagcagagaagacacaaaggaccctgatgaag
ctgactaaggcggacgagccggctccggtggggaactacgagcagaggaagcaggcggag
gagacccggctggaggacatcctgaagcgcgtaaacggcctctctctggagctctcacca
ccgggacccagctctgctgcaggcgatgaatcaaaggaagatgacgaagacgaggacgaa
gatgaggacgaggttgaggacaaagacagtagcgacgatgatgatgaagctgcgaagcct
ccctctcctccggagctcctcctctacaccgccctcagcgacttcacgggagaacaggaa
ggagacctgtcggttcagagagggggggtgctgaggatcatcacaaagacagcagacggg
tggtggctagctcaggacgctaacggcaacagaggagtcgtccccaaaacgtacctgaag
atcggctccggggtcgatgatgaggaggaggaggatgaggaggaggaggatgaggaggag
gacaacgatgacgacgaggaagaagaagaagaagatctgagcgctgatggggaggaacag
agttctccacattccaactggagcaccgtgagaagagctttgactgagattgatgcaaca
gatgtgctctctgccatgggggccataccctctggattcagaccgtcgtttctcaccaag
ctgctagtggaggaaggtgtaacacacagagggagtcactacgttcagcccaagctcagc
caatcacagctctcctttagcgacctcttcctggatccggacaccggcagggttcgagct
cggcaggtgaggacatgtgtctgtttcagtctggagggctgcaccaggattccttctccc
ggggtcggagttcacgtcctcagcagacacgtccgcctctgcgccttcgacgggtctcag
gtgttgagtaacatccacacagtgagggcgacctacaaccccaagaaccccaagacctgg
agcttctctccacgaacgacgggcctcctgccggctctcctggacggagactgtttcctg
cgctgcaactccccgtcacctgacctcggcctcctctttgaactgggagtcaccttcata
cgcaattccacaggagagagaggagacctgagctgtggctggtctttcctcaagctgagc
gacgacactgggaaccctctcccccacaggacctttgagctgatggtgaatggaggcact
ccctttgagaaggatgtgaagatggaggcctcggcccccagaggacctccagccggcgtc
ttccagcagatccttcaggcccatcgtcggcccaaactgatcctaaagttgaaatcgtgc
ggcagtgagaccagaactcgtctcagtctccttcctgacgctctgctgcactgcctgagc
tgcgtccagctgctggttctccaccgacagctgcaggccgactccctgctgctggaccgg
cccaccatgcaggacgcgggtctgatctccagtccagttctctctaccttccccgagctg
ctggaccagccggacctgctggacgccctcaggagcgcctggctggacgccgagagcaac
atgagcagagcacagaagagggacttgtcctacgtgaagcagcggttcatcgctgtctac
atggcgtcggcgttcgccctgctccgctcggcctcgctgccccccccccgctgggccgac
gccccctcggaggagcggcgagcgggggtcatctacgccgccctggacgccctcatacag
gctggacgtcctgctggccccgaggtgctggcctttgatgtggaggagctgacctttgac
ctcctccttgtggcgcggtag
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