Pungitius pungitius (ninespine stickleback): 119213973
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Entry
119213973 CDS
T07626
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppug03021
]
119213973 (btaf1)
Transcription machinery [BR:
ppug03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
119213973 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
Vac14_Fab1_bd
TPR_Trm732_C
HEAT_EZ
HEAT_2
TOR1L1_N
ARM_ECM29
TACC_C
DUF594
Motif
Other DBs
NCBI-GeneID:
119213973
NCBI-ProteinID:
XP_037321187
LinkDB
All DBs
Position
13:14960407..14981438
Genome browser
AA seq
1856 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLVSKVLTYLRSPNWDTRI
AAGQAVEAIVKNIPEWDPTPKPKEEPSEGSSPEDSSCDRLSFYHFDISRLLQHGASLLGS
AGAEFELQDDKTAEMDPKERLARQRKLLQKKLGLDMGAALGMDTEELFNDEDLDDTCQPS
GFRAQGSRGTAGSSSHNHLPIQAADLIDSEFRPGLSSRQKNKAKRMAKLVAKQRSRDTEP
NEKSNDSFEGEPEEKRRKTTNVVIDQQATEHKVLVDNIPDNSCLSEEILEWPLESFCEEL
CNDLFNPSWEIRHGAGTGLREIIKSHGAGGGKLGGSTAQQMLRQHQEWIEDLVIRLLCVF
ALDRFGDFVSDEVVAPVRETCAQTLGVALRHMNETGVSMTVDVLLKLLKEDQWEVRHGGL
LGIKYALAVRQDLISALLPRVLPAITVGLQDLDDDVRAVAAASLIPVVEGLVQLLPNKVP
FIVNTLWDSLLDLDDLTASTNSIMTLLSSLLTYPQVRQCSMQQSLTVLVPRVWPFLRHTI
SSVRRAALETLYTLLSKYDESCAMWINPILQEMLRHIFQSCILESNDEILELIQKVWMEL
LCQAPQQYVVAASCPWMGAWLCLMMQASHIPIDLNMLLEVKARCKDKAGSKARQGTTIQV
KETVQEYIAGAETVTEDPLTRDYVVVRSRLMAAKLLGALCRCICDPQLNAATQEIRPAES
LGQLLLFHLNSKSALQRIVVALVLCEWATLQKECRVVSSLVHPRLLAILSEHLYYDEIAI
PFTRMQNECKQLIALLAEAQIDLQDRLNCSVFTIDQANELVTTIFTESTVGLNVKSSEFQ
ALDSKRQQAQATVTETNAEWQQLHLRVHMVTACAVINLQTLPEKLNPLVRPLMETVKREE
NTLIQGHASSFIAKLLQQCAGRSPCPNPKIIKNLCASACIDSAVTPSSACPVPPTQENAK
GSVLEKDCIHHMVNKTRGIITLYRHQRAAFAITSKRGPAPKAPKNPTTELPPGSSICTDN
DENKKPFLIQRRGAEFSLTTVAKHFGADFTKSLPYLWENTVGPLRTVVTENQQIDRQVQL
ERGDPAAQELVNSLQVLEVMAGAMAAELKPLLLEHLPHLFTCLQHPYTAVRHMASRCVGV
LSKIAMLETMNSFLECVLPWLAAIDDCTKQEGAIEALACVMEQLDVDIVPYIVLLVVPVL
GRMSDPSDSIRFMATQCFATLIRLLPLEAGIPDPPAMSADLIRQKARERYFLEQLLDSRK
LENYKIPVPIKAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDYYLR
AQEYAKTKAPDSSPLPSLVVCPPTLTGHWVDEVGKFCHKEYLNPLHYTGPPTERMRLQHQ
VRKHNLVVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAIKQLAANFRIILS
GTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAMEAL
HRQVLPFLLRRMKEDVLQDLPPKIIQDYYCNLSPLQVQLYEDFAKSRAKASVEDSISNTS
AEEEEKPKLKATGHVFQALQYLRKLCNHPSLVLTPQHPEYKRIIEQLAGQSSSLRDLQHA
PKLSALKQLLLDCGLGSAGGSEGGTEAVVAQHRVLIFCQLKSMLDIVEHDLLKPKLPSVT
YLRLDGSVPAGQRHFIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRD
LQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMSIANTIISQDNASLQSMGTDQ
LLNLFSLDKGEKGEQQSSSTSGKSSMKSVLDGLGELWDQQQYDTEYNLDSFMHSLQ
NT seq
5571 nt
NT seq
+upstream
nt +downstream
nt
atggccgtatcaagactcgaccgtttgtttatcttgcttgataccggaacaacaccagta
accaggaaagcagcagcccagcagcttggagaagtggtcaaactccacccacatgaactc
aataacctcgtatcaaaggtcttgacctacctaaggagtcccaattgggacactcgaata
gcagcaggccaagctgtagaggccatagtaaagaatattcctgagtgggacccgaccccc
aagcctaaagaagagccgagtgaaggctcgtctcctgaggattcctcctgtgaccggttg
agtttctaccactttgacatctcccgtcttctccaacacggggcctctctgctgggatcc
gcgggggccgagtttgagctgcaggatgacaaaactgctgagatggaccctaaggaacgt
ttggcccgccagagaaagctcctccagaagaagctgggtctggacatgggcgccgctctc
ggcatggacacagaagagctgtttaacgacgaggacctggacgatacctgccaacccagt
gggttcagagcccaaggaagcagaggcacagctggatccagctcccacaaccacctgccc
attcaggctgctgacttgattgactcagagttccggccaggcctgagcagccgtcagaag
aataaggctaagaggatggccaagctagtggccaaacaaagatccagagacacggagccc
aacgaaaagagtaacgacagctttgagggggagcccgaagagaagcgaaggaaaaccacc
aatgttgtcattgaccaacaggcaaccgagcataaagtcttagtagacaacattccagac
aactcgtgtctttcagaggagatacttgagtggcctctggagagcttctgtgaggagctc
tgcaatgacctcttcaatccatcatgggagattcgtcatggtgcaggcacaggtcttaga
gaaatcatcaagtcccatggggctgggggagggaagttgggtggaagcactgcgcagcag
atgttgcggcagcatcaagagtggatcgaggacctggtcatccggctgctctgcgttttc
gctctggaccgctttggagactttgtatctgatgaggtggtggctcctgttagggagacg
tgtgcccagacactaggtgtggcccttcgccacatgaatgaaactggcgtttccatgact
gtagacgtcctgctgaagctgcttaaagaagaccagtgggaggtccgtcatggaggcctg
ctcgggatcaagtatgccctggctgtccgacaggacctgatatctgccctactacccaga
gtacttcctgccatcactgtaggactacaggacctagatgatgacgtcagggccgtggcc
gctgcatccctcatccctgtggtggaaggcttggtacagctactgcctaataaggtaccc
tttatcgtgaacacgctatgggattctcttttggacctggacgacctcactgcttccacc
aacagcatcatgacactgctgtcctcactgctcacctacccgcaggtccgccagtgcagc
atgcagcagtcattgactgtcttggtccctcgggtttggccgttcctgagacacaccata
tcgtcagtaagacgggcggcgctggaaaccctttacacgctgctctccaaatacgacgag
agctgtgctatgtggatcaaccccatcctacaagagatgctgcgacacatcttccagtcc
tgcatactggagagcaacgatgaaatccttgaactgattcaaaaggtctggatggagctg
ctgtgtcaggccccgcaacagtacgtggtggcggccagctgtccttggatgggcgcctgg
ctctgcctcatgatgcaggcctcacacatccccatagacctcaacatgctgctggaagta
aaggcccgctgcaaggataaggctggttcaaaggcacgtcaagggaccaccattcaagtg
aaggaaactgttcaggagtacatagcaggagcagagacggtgactgaagacccactaacg
agggactacgtggtggtccggtctcgcctcatggctgccaaattgctgggtgctctgtgt
aggtgtatctgtgaccctcagctcaatgctgcaactcaagagatccgaccagctgagtct
ttgggccagctgttactcttccacctcaactctaagtccgccttgcagcgcatagtagtg
gccctggtgctttgtgagtgggctacgctgcagaaggagtgccgggtggtgtcctctttg
gtgcatcctcgccttttggccattttgtcagaacatctgtactacgatgagatcgccatc
cctttcacacggatgcagaacgagtgcaagcagctcattgctctgctagctgaggcccaa
atagacctgcaagaccgcctcaattgtagcgttttcactattgatcaagccaatgaactg
gtaaccaccatctttacagagtcgacggtgggtctcaacgtgaagtccagtgagtttcag
gctctggacagtaaacggcagcaggcccaagcaacggtaacggaaaccaacgcggagtgg
cagcagctgcacctgcgcgtccacatggtcacggcctgcgcagtgataaacctccagacg
cttcctgaaaagctgaacccgctagtcaggcctctgatggagaccgtcaagcgtgaggag
aacaccctcatccagggacacgcctcttctttcatagccaagctgctgcagcagtgtgcc
ggacgctcgccgtgccccaatcccaaaatcatcaaaaatctctgtgcctcggcctgcata
gactctgctgtcaccccctcctctgcctgccccgttccccctacgcaggaaaatgcaaaa
ggcagtgtgttagagaaagattgcattcatcacatggtcaacaaaacccggggtataatc
accctgtaccgccaccagagggcagcgtttgctataaccagtaagaggggtccagcccct
aaagccccaaaaaacccaactacagagcttcctccaggcagctccatctgcactgataac
gatgagaacaagaagccctttcttattcagaggcggggagcggagttctctctgacaacg
gttgccaagcactttggcgcagacttcaccaagtctttgccatacctatgggagaataca
gtgggaccactgaggacagtagtgactgagaatcaacaaattgatagacaggtccagctg
gagaggggagaccctgcagctcaggaactagtcaactctctacaagtgttggaagttatg
gctggggccatggctgctgaactcaaacctttgctgctggagcacctaccccatctgttc
acctgcctgcagcatccgtacacggcagtgcgtcacatggcgtcgcgctgtgtgggtgtg
ctcagtaagatcgcaatgctggagactatgaacagcttcctggagtgtgtcctcccctgg
ttggcagctatcgacgactgcaccaaacaggagggggccattgaggcactcgcttgtgtc
atggagcagcttgacgtggacattgtcccctacatcgtgctgcttgtagtgccggtgctg
ggccgcatgagcgaccccagcgatagcatccgtttcatggccacacagtgctttgccact
ctcatccgcctgttgcccctggaggctggcatacccgaccctccagccatgtcggctgat
ctgatccggcagaaggccagagaacgctacttcctggagcaactgctagatagcaggaaa
ttggagaactacaagatccctgttccaatcaaggctgagctgaggaagtaccagcaggac
ggagtgaactggctgtccttcctcaacaaatacaagcttcatgggatcctgtgtgacgac
atgggccttggcaagactctgcagtccatctgcattctggcaggagattactacctcagg
gcacaagagtatgccaagactaaggccccagacagcagccccctgccgtctctagtggtg
tgtcctcccacgctgactggccactgggtggacgaagtgggcaaattctgccacaaagaa
tacctcaaccctctgcactacaccgggcctcctacggagcgaatgcggctgcagcaccaa
gtgagaaaacacaacctcgtagtggcctcctacgacgttgtacggaatgacatcgacttc
tttaggaatatcaaatttaattactgcatcctcgatgagggtcatgtaattaagaacggg
aaaaccaaactctccaaagcgattaagcagctggctgccaacttccgaatcatcctgtca
ggaacacccattcagaacaacgtcctggagctctggtcgttgtttgacttcctcatgccg
ggcttccttggaacggaacggcagtttgccgcacgctacggtaaaccgatcctggccagc
cgggacgccaaaagttcctcacgggaacaggaggcaggtgtcctggcgatggaggcgttg
catcgacaggtgctacccttccttctgaggaggatgaaggaagatgtcctccaggacctt
cctcctaaaataattcaggactattactgcaacttgagtcctctacaggttcagttatac
gaagactttgcaaagtctcgagccaaggccagtgtggaggacagcatctctaatacctct
gcagaagaggaggagaagcccaaactcaaggccacaggccatgtcttccaggctctgcag
tacctgaggaagctgtgtaatcacccgagcttggtcctcaccccgcagcatcccgagtac
aagcgcatcatcgagcagctcgcagggcagagctccagcctgcgggaccttcagcatgcg
cccaaactctctgctcttaaacagctgctgttggactgcggcctcggcagcgctggaggg
tctgaggggggaacagaggccgtcgtggcccagcaccgcgtgctcattttctgtcagctg
aagagtatgctggacattgtggaacatgacctcctgaaacccaaactgccctcagtcacc
tacctgaggctggacggcagtgtgccggccggccagcggcacttcatcgtctccaggttt
aacaatgacccatccattgacgtgctcctgctgaccacccatgtcgggggtcttggtctg
aacctcactggtgcagacaccgttgtgtttgtggaacatgactggaaccccatgagggac
cttcaggccatggatcgggcccataggataggacagaaacgcgtagtgaacgtgtatcgg
ctgatcacgcggggcacactggaggagaagatcatgggtctgcagaagttcaaaatgagc
atcgccaacacaatcatcagccaagataatgccagcctgcagagtatgggcacggaccag
ctcctcaacctcttcagcctcgacaagggcgagaagggtgagcagcagtcgtcgtcgacc
tctgggaagtcctccatgaagtctgtgctggacggcctcggggagctgtgggaccagcag
cagtacgacacagagtacaacctggacagcttcatgcactcgctgcagtag
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