Pungitius pungitius (ninespine stickleback): 119214131
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Entry
119214131 CDS
T07626
Symbol
xpo1b
Name
(RefSeq) exportin-1 isoform X1
KO
K14290
exportin-1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03008
Ribosome biogenesis in eukaryotes
ppug03013
Nucleocytoplasmic transport
ppug03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119214131 (xpo1b)
03008 Ribosome biogenesis in eukaryotes
119214131 (xpo1b)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119214131 (xpo1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119214131 (xpo1b)
03009 Ribosome biogenesis [BR:
ppug03009
]
119214131 (xpo1b)
03016 Transfer RNA biogenesis [BR:
ppug03016
]
119214131 (xpo1b)
03036 Chromosome and associated proteins [BR:
ppug03036
]
119214131 (xpo1b)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
119214131 (xpo1b)
Ribosome biogenesis [BR:
ppug03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
119214131 (xpo1b)
Pre-60S particles
119214131 (xpo1b)
Transfer RNA biogenesis [BR:
ppug03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
119214131 (xpo1b)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
119214131 (xpo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
BspA_v
Motif
Other DBs
NCBI-GeneID:
119214131
NCBI-ProteinID:
XP_037321504
LinkDB
All DBs
Position
13:complement(14116436..14137609)
Genome browser
AA seq
1099 aa
AA seq
DB search
MSGRRPSLASSVGVVVVRSGGPHISMPAIMTMLADHAAQQLLDFNQKLDINLLDNVVNCL
YHGVGPQQRMAQEVLTHLKEHPDAWTRVDTILEFSQNMNTKYYALQILETVIKTRWKILP
RNQCEGIKKYVVGLIIKTSSDASNVEKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVG
ASRTSESLCQNNMIILKLLSEEVFDFSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMEN
SQNAPLVQATLETLLRFLNWIPLGYIFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVS
VSQYEEQFVTLFTLTMCQLKQMLPLNTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQ
LIEKRLNLRETLMEALHYMLLVSEVEETEIFKICLEYWNHLAAELYRESPFSTSTSPLLS
GNQHFDVPPRRQLYLPVLSKVRLLMVSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYK
NMRETLVYLTHLDYADTERIMTEKLHNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKR
FLVTVIKDLLGLCEQKRGKDNKAIIASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHE
THDGVQDMACDTFIKIAQKCRRHFIQVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYE
AVGYMIGAQTDQAVQEHLIEKYMLLPNQVWDSIIQQATKNVDILKDPETVKQLGSILKTN
VRACKAVGHPFVIQLGRIYLDMLNVYKCLSENISAAIQTNGKGGEMVTKQPLIRSMRTVK
RETLKLISGWVSRSNDPQMVGENFVPPLLDAVLIDYQRNVPAAREPEVLSTMATIVNKLG
AHITSEIPQIFDAVFECTLNMINKNFEEFPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFK
LVLDSIIWAFKHTMRNVADTGLQILYTLLQNVAQEEAAAQSFYQTYFCDILQHIFSVVTD
TSHTAGLTMHASILAYMFNLVEEGKITTVLNPSSPTTNQGFIQEYVANLLKTAFPHLQDA
QVKVFVTGLFSLNQDIPAFKEHLRDFLVQIKEFAGEDTSDLFLEEREASLRQAQEEKHKI
QMSVPGILNPHEIPEEMCD
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggcgccgtccgtccctggcatcctcggtgggagtggttgtagtccgcagcgga
ggaccacatatctctatgccagcaattatgacaatgttagcagaccatgcagctcagcag
ctgctggacttcaaccagaaattggatatcaacctgctggataatgtggtgaactgtcta
tatcatggagtgggaccacagcaacgaatggcacaagaagtgttgacgcatttgaaagag
cacccggacgcctggacacgagtagacaccatcctggagttctcccagaacatgaacacc
aaatactatgctcttcagattctggaaacggttatcaaaacaagatggaagattctcccc
cgaaatcagtgtgaaggtataaaaaagtatgttgtcggtctcattatcaagacttcatca
gatgcttcaaatgtggagaaagaaaaggtgtacattggaaagctgaatatgatccttgtt
cagatcctcaagcaggagtggccgaaacactggcccaccttcatcagcgacattgttggg
gcgagtcgcaccagcgagagcctttgtcagaacaacatgatcattctcaagctgctcagc
gaggaggtgtttgacttctccagtggccagatgactcaggtcaaggccaagcacctaaag
gacagcatgtgcaatgaattctcccagattttccagctttgccagttcgtcatggaaaac
tcccagaatgcccccctggtccaagccactctggagacccttctacgttttctcaactgg
attcctctggggtacatctttgaaaccaaactgatcagcacattggtgtataagttcctg
aacgttcccatgtttcgcaacgtgacactgaaatgcctcacggagatcgccggagtgagc
gtcagccagtacgaggagcagtttgtcacgctcttcacgctcaccatgtgtcaactcaaa
cagatgctgccgctgaacacgaacatccggctggcctacgccaacgggaaggatgacgag
cagaacttcatccagaacctcagtctgttcctctgcacgttcctcaaagagcacgggcag
ctcattgagaagcggcttaacctcagagaaaccttaatggaggccctccactacatgctg
ctagtgtccgaggtggaggagacggagatcttcaaaatttgtctagagtattggaaccac
ttggctgctgagctctacagagagagccccttctctacgtccacgtccccactgctctct
ggcaaccagcactttgacgtcccaccacgcagacagctttacttgcccgtactctccaag
gtgcgtctgcttatggtgagtcgcatggccaagccggaggaggtgctggtggtggagaac
gaccagggagaggtggtcagagaattcatgaaggacacagactccatcaacctttacaag
aacatgagggaaacgctcgtgtacctgactcacttggactacgcagacacagaacgcata
atgacggaaaagcttcacaaccaggtgaacggcaccgagtggtcctggaagaacctcaac
acgttgtgctgggccattggctcaatcagtggggccatgcacgaagaggacgagaagagg
ttcctcgtcaccgtaatcaaggatctgttgggtctgtgtgagcagaagaggggaaaggac
aacaaggccatcatagcctccaacatcatgtacatcgtcggccagtacccacgctttcta
agagcccactggaagttcctcaaaaccgttgttaacaaactttttgagttcatgcacgag
acacacgacggtgttcaggacatggcctgcgatactttcatcaagatcgcccagaagtgc
cggcgccactttatccaggtgcaggtgggagaagtgatgcccttcatcgacgagatcctc
aacaacatcaacacaatcatctgtgaccttcaaccgcagcaggtgcacacgttctatgag
gcagtaggttatatgattggcgcccagacggatcaggctgttcaagaacacttgatagaa
aaatacatgctgctgcccaaccaagtgtgggacagcatcatccagcaggctaccaagaac
gtggacatcttgaaggacccggagacagtgaaacagctgggcagcatcctaaagaccaat
gtccgagcctgcaaggccgtgggacaccccttcgtcatccagctggggcggatttacctc
gacatgctcaacgtctacaagtgcctcagcgagaacatctctgctgccattcagacaaat
ggtaagggaggtgagatggtgacgaagcagcccctgatccggagcatgagaacggtgaaa
cgagagacactgaaactgatttcaggctgggtcagccgatcaaacgatccacagatggtt
ggagagaactttgtcccgcccctgctcgacgctgtcctcatcgactatcaacgcaatgtc
cccgctgcccgggagcctgaggtcctcagcactatggcgactatagtcaacaagctgggg
gcacacatcactagtgagataccgcagatctttgatgccgtcttcgagtgcaccctaaac
atgatcaacaagaactttgaggagttcccagagcaccggactcacttcttctacttactg
caagcagtgaactctcactgcttccccgcgttcctcgccataccccccgcccagttcaaa
ctggtgctggactccatcatctgggccttcaaacacaccatgaggaatgtggcggatact
ggtctgcagatcctctacacgctgctgcagaacgttgcccaggaggaagcagccgcacag
agcttctaccagacgtacttctgcgatatcctccaacacatcttctctgtggtcactgac
acgtcacatacggccggcctgacgatgcacgcgtccatcctggcctacatgttcaacctg
gtggaggagggcaagatcaccacggtgctgaacccttccagccccaccaccaaccagggc
ttcatccaggagtatgtggccaacctgctcaagaccgccttcccccacctacaagatgct
caagtgaaggtgtttgtgaccgggctgttcagcttaaaccaggatatccctgccttcaag
gagcaccttagggacttcctcgtccagatcaaggagtttgcgggcgaggacacctcagac
ctgttcctggaggagagggaggcgtcgcttcgtcaggcccaggaagagaaacacaagatc
cagatgtccgtcccgggcatcctcaacccacacgagatccccgaggagatgtgtgactga
DBGET
integrated database retrieval system
