Pungitius pungitius (ninespine stickleback): 119214178
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Entry
119214178 CDS
T07626
Symbol
ccdc88ab
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ppug03037
]
119214178 (ccdc88ab)
Cilium and associated proteins [BR:
ppug03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
119214178 (ccdc88ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
KASH_CCD
DUF4472
GAS
Motif
Other DBs
NCBI-GeneID:
119214178
NCBI-ProteinID:
XP_037321629
LinkDB
All DBs
Position
13:complement(3862248..3910441)
Genome browser
AA seq
2014 aa
AA seq
DB search
MESEVFTPLLEQFMLTPLVCWVKTAGQASLTDGTQLSEYIELVDGIYLNEIMLEINPKAT
VQRTNKKVNNDPTLRIQNLSILIRQVKGYYQDTLQQLVMMPLPNVLVLGRNPLSEQGLEE
MKKLLLLLLGCAVQCEKKEEYIEGIQTLDFDSKAAIASHIQEVTHNQENVVDLHWLESGE
MPAEDLDSLSRNLAFHLKRLVDDRDTQLETIVELTQERDCVQLSPLAPCPTQSPGDSPSM
RRTESRQHLSVELADAKAKIRRLRQELEEKSEQLLDTRQELENMEVELRRLQQESYQLVS
DARSARAYRDELDALREKAIRVDKLESELSRYKERLHDIEFYKARVEELKEDNQVLLETK
SMLEEQLDATRSRSDKLHLLEKESLQLKSKIHDLEMERDMDRKRMEEILEENLVLEMAQK
QSMDESLHLGWELEQLAKTPELTEAPQKSLGEEVNELTSSRLLKLEKDNQTLMKTVEELR
GAASHDTVTHKLSKVNLENQRLNQKLEQLGSELTADRESLLSAESLSTDLMKEKALLEKT
LETLRENSERQLKGLEQENKHLSQTVTSLRQRCQVGAEARVKDVEKENRVLHESICETTA
KLNKIEFERKQLRKELEVVKEKGERAEELEVQMQKLERVNESLQKKVSSLGITCEKVSSL
EKENSDLEAEGRHLKKKLDTLKNMTFQLEAVQKENSQLEKENLELRRLAESLRSAGAKAA
QLEAENRELESERSHLKRSMELLKASSKKTERLEVSYQGLDTENQRLQKALENSSKKIQQ
LEEELQEVETENQSLQRNLEELKISSKRLEQLEQENKILEQESSQLEKDKKHLEKENKRL
RQQAEIRDSKLDDDNQRISCLEKENRTMGKEMIFFRDSCTRVKDLERENKELVKLGTIDK
KTLSTLREELVSEKLRTQQLNNDLDKLTHELEKIGLNKERLLHDESSDDRFRLLETKLES
TLKSSLEIKEEKIAALEARLQESSNLNQQLRQELKTVKKNYEALRQREEEERMVLSSPPR
GGDDPQAVSKWENESHEATRELLKVKDRLIEVERNNATLQAEKAALKSQLKQLETQSANL
QAQIVAVQRQTASLQENNTSLQTQNAKLQVENSTLSSKSAALMAQNAQLQSQQSSVEGER
EGALKDKEELRSTYELLLRDHEKLAALHERQAAEYEALIGKHGGLKTSHKGLEQQHRDLE
DKYKQLMQRKGELEDLEKHLKEQQEKMALENQTHQATADQYKLLKEDNDRLNNTYRQLVK
DNDNLQLDHKNVKTQLNSAKLDQTKLEAEFSKLKEQYQQLDITSTKLTNQCELLSQLKGN
LEEENRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMD
QYKFYDPSPPRRRGNWITLKMRKLIKPKSRERMRSLTLTPSRSESGDGFLTFPQDSQDSS
SIGSGSNSLDDTLTQKRSSRRRGQQPPAQVQGSTNALKRLPFMRNRSKDKDKAKAIYRRS
MSMNDLLQTMAVAGDPDAQWASSIDNLDGAEAGDAGAAASRGRSGRRMKDLALSTNAIDC
AALTLPTPGHRRAKLRLQVKDNASCEDVTGSLEDPKSHACRPTSLHSNRTISSNSNNNSH
LTSPLEGKGALNGSLSRPHSESSGEFSLSLDQEVWSSSGSSPVQQPTSSRSSHQSPLQLR
RALEPSAAAGGAGPTQAAKAGSPVREVLSLQQFLDEGIDPAESGSQENLTADSPRLSTSS
ERAPKERPKSRGILRSSSGKAAPVASDRPPRVAGQPGRPTLRKAESTRVRGSAPVRPGLS
SQGKATSVSGRLDLASSTLPRASSVISTAEGTTRRTSIHDLLSKDHRHPVSVDAAPPPAA
AAAAKAGGRPQPTPSEYRPGSADLKGPLTAAAPLPKSLSLPCRSSEDPDLSTLESFLGPS
FTAESVFMDSIFSESLGKHHPFLSLNPTLVSNISGPPVTNKTHTPPPPKTPNQDAFSQSN
GPASGGADPGCVNNEDESLSPEDKQSLWYEYGCV
NT seq
6045 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcgaggttttcacccctctgctggagcagtttatgctcacgcctctggtgtgc
tgggtgaagacagccggccaggcctctttgaccgatggcacccaactgtcggaatatatt
gagttagtggatgggatttacctgaacgagatcatgctggagataaatcctaaggccact
gtgcagaggaccaacaagaaggtgaacaatgacccgacactgcgcatccagaacctctct
attctcatcaggcaggttaaaggctactaccaggataccctccagcagctggtgatgatg
cctcttccaaacgtgctggtactcggccgcaaccctctgtctgagcaaggtctggaggag
atgaaaaaactgttgctgctgctactgggctgcgcggtgcagtgcgagaagaaggaagaa
tacatcgagggtatccagactctggactttgactcaaaagctgccatagcatcccacatc
caagaggtgactcataatcaggagaacgtagtggacctgcactggctggaaagtggcgaa
atgcctgcagaggacctggacagcctctccagaaacctggctttccacctcaaacgcctg
gtggacgacagggacacgcagctggagacgatagtggagttgactcaggagagagactgc
gtgcagctgtccccactggctccctgtcccacccagtctcccggagactcccccagtatg
aggaggaccgaaagccgccagcacctctctgtggagttggctgatgccaaggccaagatc
cgccggcttcgacaggaactggaggagaagagcgagcagcttttggacacccggcaggag
ctggagaacatggaagtggagctcaggaggcttcagcaagagagctaccagttggtgtcg
gacgctcgatcggcgcgggcctaccgcgacgagctggacgcgctccgagagaaagcgatc
cgcgtggacaaactggagagcgagctgagccgatacaaggagaggcttcacgacattgag
ttctacaaggccagggtggaggagctgaaagaggacaaccaggtcctgttggagacaaag
agcatgctggaggagcagctggatgcgacccggagccgctccgacaaactgcaccttctg
gagaaagagagtctgcagctcaaatcaaagatccatgacctggagatggagcgggacatg
gatcgtaaacgtatggaggagatcttggaggagaaccttgtgcttgagatggcccagaaa
cagagcatggacgagtccctgcacctgggctgggaactggagcaactggccaagacgccg
gaactgactgaagcccctcagaagtcgttgggcgaggaggtgaatgagctgacctccagc
cgtctgttgaagctggagaaagacaaccagaccctgatgaagactgtggaggagctcaga
ggagcagccagtcatgacacggtgacacacaaactatcaaaagtcaacctggaaaaccag
agactcaaccagaaattggagcagttggggagcgaactgacagcagacagagagtccctg
ctgagcgctgaatcactcagtactgacctgatgaaggagaaggctctactggagaagact
ctggaaacactcagagaaaactcagagagacagctgaagggcctggagcaggagaacaag
cacctgagccagacggtgacgtctctgcgccagcgctgccaggtcggagctgaggcccgg
gtcaaggacgtggagaaagagaatcgcgttctccacgagtccatctgcgagacaaccgcc
aaactcaataagatagagtttgaaaggaaacaacttcgcaaggagcttgaagtagtgaag
gagaaaggcgagcgggctgaggagttggaggtccagatgcagaagctggaaagggtcaac
gagagcctgcagaagaaagtatccagtctaggaatcacctgtgaaaaggtgtcttctttg
gagaaggagaactcagatctggaggcggaaggccgccatctgaagaagaagctggacact
ctgaagaacatgaccttccagctggaagctgtgcagaaggagaactcccagctggagaag
gaaaacctggaactccggcgcttggccgagagcctccggtcggcgggcgctaaggccgct
cagctggaggccgagaacagggagctggagagcgagaggagccatttgaagcgcagcatg
gagctgctcaaagcctcatccaaaaagactgagagattagaggtgagttaccagggccta
gatacagagaaccagcgcctgcagaaggctttagagaacagcagcaaaaagattcaacag
ttggaggaagagctgcaagaggtggagactgagaaccaaagcctccaacgcaacctggaa
gagctcaagatctccagtaaacgcctggagcagctggaacaagagaacaagattctggag
caggaaagctcgcagctagagaaagacaagaagcacctggagaaggagaacaagcggctg
aggcagcaggccgagatccgcgactccaagctggatgacgacaaccagcggatctcctgc
ttggagaaagagaatcggaccatgggcaaagagatgatcttcttcagggactcctgcacc
agggtcaaggacctggagagagagaacaaggagctggtcaaactgggcaccattgataag
aagaccctcagcacactcagagaggagcttgtgagtgagaagctgcgtactcagcagttg
aataacgatctggacaaactgacccatgagctggagaagattggactgaacaaagagagg
cttctgcacgacgagagctctgacgacaggttcaggctcctggagaccaaactggagtcg
actctgaaatcgtctttggagattaaagaggagaagatcgccgccctggaggcccgactg
caggagtcctctaacctcaaccagcaactgcgccaggagctcaagacggtgaagaaaaac
tacgaagcgctgcgccagagggaagaggaggagaggatggtgctgagctcgccccctaga
ggaggggatgaccctcaggctgtcagtaaatgggagaacgagagtcatgaagccaccaga
gaactgctgaaagtcaaagacagactcatcgaggtggagaggaataatgccacgctgcaa
gctgagaaggcggccctgaagagtcagctcaaacaactggaaactcaaagcgccaacctg
caggcccagatagtggccgtgcagagacagactgcttctttgcaggagaacaacacgtcg
cttcaaacgcagaacgccaagctgcaggtggagaactccaccctgagctcaaagagtgcg
gccctcatggcccagaacgctcagctgcagagccagcagagcagcgtggagggcgagcgc
gagggagcgctgaaggacaaagaggagctgaggtccacctacgagctgctcctgcgcgat
cacgagaagctggcggcgctccacgagaggcaggcggccgagtatgaagccctgatcgga
aagcacggcggcctgaagacctcccacaagggcctggagcagcagcacagggacctggag
gacaagtacaagcagctcatgcagaggaaaggagagctggaggatctggagaaacatctc
aaggagcagcaggaaaagatggcgctagagaatcaaacacaccaagccacagctgatcag
tacaaactgctgaaagaagataatgataggctgaataatacctatcgtcagctggtgaag
gacaacgacaatctccagctggaccataagaacgtgaagactcagctgaacagcgccaag
ctggaccagactaagctggaggctgaattctctaaactgaaggagcagtaccagcagctg
gacatcacctcaaccaagctcaccaatcagtgcgagttgttgagccagctcaaaggaaac
cttgaggaggagaatcgccaccttttggaccagatccagactctgatgctgcagaatcgc
acactgttggagcaaaccatggagagcaaggacctgttccacgtcgagcaaagacaatac
atagacaagctgaatgagctgaggagacagaaggagaagctggaggagaagatcatggac
cagtacaagttctacgacccctcacctccacgcaggcgtggcaactggatcactttgaag
atgaggaagttgatcaagccgaagagccgggagaggatgcgctctctcacgctgacgccc
tcccgctcagagtccggcgacggtttcctgacgttcccccaggacagccaggacagctcg
tccatcggctccgggtccaactcgctggacgacacgctgacacaaaagaggagcagcagg
aggagagggcagcagccccctgcccaggtgcagggttccaccaatgctttaaaaaggttg
cctttcatgaggaacagatccaaggacaaagacaaggccaaggccatctaccggcgctcc
atgtccatgaatgacctgctgcagaccatggcggtggcgggcgaccccgacgcccaatgg
gcgagcagcatcgacaacctggacggcgccgaggccggggacgccggcgcggccgcgagc
agagggcgcagcgggcggcgcatgaaggatctcgccctttccaccaacgccatcgactgt
gccgccctcaccctgcccacgcccgggcaccgcagggccaagctgcggctccaggtcaaa
gacaatgcctcctgtgaagacgttaccggctccttggaagaccccaagagtcacgcctgc
agacccaccagtctccatagcaacaggaccatcagtagtaatagtaacaataactcccac
ctcacttctcctctggagggcaaaggcgcgttgaacggcagcctcagcaggcctcacagc
gagagcagcggggagttcagcctgagcttggaccaggaggtgtggtccagcagcggcagc
agccccgtgcagcagcccacctcctcgcgctcctcccaccagagccccctgcagctgcgc
agggcgctcgagccgtccgcagccgcgggcggcgccggcccgacccaggcggcgaaagcg
ggttccccggtgagggaggtgctttccctgcagcagttcctggatgagggcatcgatcct
gcagagtctggcagtcaggagaacctcaccgcggactctcctcgcctctccacctcctcc
gagcgcgcgcccaaagagcgcccaaagagccgaggcatactgcgctcctccagcgggaag
gcggcgccggtcgcctcggaccgcccgccccgggtcgccgggcaaccgggtcgccccacc
ctgcgcaaggcggagagcacccgcgtccggggctcggcgccggtccgcccgggcctgtcg
tcgcagggcaaagccacgtcggtgtcggggcgcctggacctggcctcgtccacgctgccc
cgcgccagcagcgtcatctccaccgccgagggcaccacgcggcgcaccagcatccacgac
ctgctctccaaggaccaccgccacccggtgtccgtcgacgcggctcctccccccgccgcc
gccgccgccgccaaggccggggggcgcccccagccgacacccagtgagtaccgccccggc
agcgccgacctaaagggaccccttaccgccgccgcccccctgccaaagtcactcagcctg
ccctgccgtagctcggaggatccagacctctccaccctggagtccttcctgggcccctcc
ttcaccgccgagtccgtcttcatggactccatctttagtgagtcgctgggcaaacaccac
cccttcctgtctctgaaccccaccctagtcagcaacatcagcgggcctccggtcacaaat
aaaacacacacccctcctcctcctaaaaccccaaaccaggatgctttcagccaatcaaac
ggcccggccagcgggggcgccgatccgggttgtgtgaataacgaggacgagtccctgagc
ccagaggacaagcagtccctgtggtacgagtacggctgtgtgtga
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integrated database retrieval system
