Pungitius pungitius (ninespine stickleback): 119214196
Help
Entry
119214196 CDS
T07626
Symbol
rin2a
Name
(RefSeq) ras and Rab interactor 2
KO
K23687
Ras and Rab interactor 2/3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119214196 (rin2a)
Membrane trafficking [BR:
ppug04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
119214196 (rin2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
RA_2
SH2
Lpg0393_VPS9
FERM_f0
SH2_1
Motif
Other DBs
NCBI-GeneID:
119214196
NCBI-ProteinID:
XP_037321683
LinkDB
All DBs
Position
13:16917378..16955799
Genome browser
AA seq
1098 aa
AA seq
DB search
MSTSTMTQPPRQERKGSFFKLIDSFACEIVTLKKEMGKKKASEEDHMTDPLLRLGEEVGG
LFYQASPCTGIGPGLVGARDSGYDSLRRRLSVLDRLVQTHGVWLQLGFSHQDAMRVLQSQ
PDGTFVVRKSTSLQRKVISVRMNKDSAVPVKDFPVKESQYTFSLVGSGLSFADLFRLVAF
CCISRDVLPFTLKLPEAIASATTSADLEEVAKLGAGFWDALGGHRRKDSVLSSGISAPER
PPPPVCLTNSPRPPRLKTRTPSEVESCQSNGALCFINPLFIKVHQPDGDHSSASATAKLS
LSGQLVSDGLEPDNGETQHVCGDGAQVSCSDPRHSSQLGHSELQSLDVKSELPGVNSRTS
SHKISATDRGQRLPPPRPPPPRLAAPLRQRSMPEKIPWINVPKEKVEEKGSLLSRLSSSL
SISPSSSPPKKHNISSPISIPWPSLPISLSSLSSSPRRLNASPSSSQEDAQCHLALEEQT
IERALLMARLSHCNATRTPAQESSSPSESATMTTSKQADGTGEHEEGTAEECSGGSQRLS
DMSLSTDSSDSLDFSQPSAFFLPALHDPSPPTEADFNTHLPLSLPPTHQPCCSTEEDEGD
DEEEPDYGVESDHDQDLTMVPPGHRMKRCPSAGALILQRALRGHLRKMSGVFNSLLTPEK
RAVRRVLELSRDKGSYFGCLVQDYLSYMGEGAGTQAWQGYASGLELLQTLRQFITQMKSY
LRQSSELEPPIESLIPEDQIDGVLEKAMHKIILKTLKPVVSAALQEFQVRSGEWRELKEN
LSLAKARQPQEMGVADALPPDPAAIEKIKHKFHTMSKLYSPEKKVTMLLRVCKLIYTIME
DNSGRLYGADDFLPMLTYVLAQCDMPQLDNEILYMMELLDPSMLHGEGGYYLTSAYGAMS
LIRNFQEEQAARVLSSETRDTLHQWHRRRTTQRSAPSIDDFQNYLRVALQELDTGCTAKT
LQVRPYASVEEVCRLCAQKLKLPDPENYGLFLLMEGSSQQLAADTHPQKIKAELHSRSQS
TPFHFVFRRVAHSNASLSAPPELMANLNDLTMTSSPQANLNDLGMDLPPPSTLLNSGLSP
SLGLSLPPSHLNENSISV
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccagcaccatgactcaaccccccaggcaggagaggaagggcagcttcttcaag
ttgattgattcgtttgcctgtgaaatcgtcacactgaagaaggaaatggggaaaaagaaa
gcatctgaagaagatcacatgactgatccactccttcgactgggcgaagaggtgggcggt
ctcttctaccaggcgtccccttgcactgggatcggaccggggctggtcggagccagagac
tcaggctacgactccctccgtcggcggctcagtgttctggaccgactggtgcagacccac
ggcgtgtggctgcagctcggcttcagccaccaggacgccatgcgtgtgctgcagagccaa
cccgacgggacattcgtggtgaggaagtcaaccagcctgcaaaggaaagtcatatctgta
cgcatgaacaaagactctgcagttcccgtcaaggacttccctgtgaaggagagccagtac
actttctctctggtgggatctggcctgagctttgcagacctcttccgcctggtggctttc
tgctgcatcagcagggatgtgttgcctttcactctgaagcttccagaggccatcgcctca
gccacaacatctgccgatctggaggaggttgctaaacttggtgcaggcttctgggatgct
ctgggtggccacagaaggaaggactcagtcctctcttcaggaatatctgctcccgaaaga
ccacctccccccgtctgtttgaccaactcccccagacctccgcggcttaaaactcgcacc
ccatcggaggtcgagagttgccagtcaaacggagccctctgcttcatcaaccccctcttc
ataaaggttcaccaaccggatggcgaccacagctccgcctcagcaacagcaaagctaagc
ctaagtgggcagctcgttagcgacggcctggagcctgataacggggaaactcaacacgtt
tgcggagacggtgctcaggtttcctgctcggatccaaggcacagcagccagttgggccac
agcgaacttcagagccttgacgtaaagtcggagctaccgggagtcaacagccgaaccagc
agtcacaagataagtgctacagacagagggcagcggttgccccccccacgtccaccccca
ccgcgcttggccgctcctctccgacagcgcagtatgccagagaagatcccctggatcaat
gtccccaaggagaaagtggaggagaaggggagcctcctttctcgcctcagctcctcgctg
agcatcagcccttcatcctccccacccaagaaacacaatatcagctcacccatatccatc
ccatggccctctctgccaatctctctgtcgtccctctcctcctctccacgccggctcaat
gcctcgccgtcatccagccaggaggatgcgcagtgtcacttagcattggaggagcagact
attgagagggctctcttgatggcccggctgtctcactgtaatgccaccaggaccccggcc
caggaatccagcagtccttcagagtccgctacgatgacaacaagcaagcaggcagatggg
acaggagaacatgaagagggaacagccgaggaatgtagcggtggcagccagcggctgagt
gacatgagcctctccacggattcctcagactctctggatttctcgcagccctctgccttc
ttcctccccgctttgcatgaccccagtccccccacggaggccgactttaacacccacctc
cccctctccctgccaccaacccaccagccctgctgcagcacagaggaggacgagggcgac
gatgaagaggagcctgactacggtgtcgagagtgaccatgaccaggacctgactatggtt
ccgccaggacaccgcatgaagcggtgccctagcgccggtgctttgatcctgcaaagagcg
ctgcgagggcacctgcgcaagatgagcggtgttttcaactctctactgactcctgagaag
agggctgtccgccgagttttggagctgtccagggacaaaggctcatactttggctgcctg
gtgcaggactacctgagctacatgggagagggggcgggtacccaggcctggcagggctac
gcctccggactggaactgctgcagaccctccgccagtttatcactcagatgaagagctac
ctgagacagagctcggaactggagccaccaattgagagcctcattccagaagaccagatc
gacggcgtcctggagaaggccatgcacaagatcatcctgaagactctgaagccggtggtg
agcgctgccctgcaagagttccaggtgcgcagcggggagtggcgggagctgaaggagaac
ctgtctctggccaaggcccggcagccacaggagatgggcgtggccgatgcgctgcccccg
gaccctgcggccatagagaagatcaagcacaagttccacaccatgagtaaactgtactcg
cccgagaagaaggtcaccatgctgctgagggtctgcaagctcatctacaccatcatggag
gacaactcaggacgtctgtacggtgcggatgacttcctaccaatgctaacctacgtgttg
gcccagtgcgacatgcctcagctggacaacgagattctatacatgatggagctgctggac
ccctctatgctccatggagaaggtggctactacctgaccagcgcttatggagccatgtca
ctgattcgaaacttccaggaagagcaggcggccagagtgctgagctcggaaaccagggac
acgctccaccagtggcaccgccgacgcacaacccagcgctctgcaccgtccatcgacgac
ttccagaactacctgcgggtggcactgcaagagctggacacaggctgcactgccaagacc
ctgcaggtccgaccgtacgcctccgtggaggaggtgtgtcgtctgtgcgcccagaagctc
aagttgcccgacccggagaactatggcctgttcctgctgatggagggcagcagccagcag
ctggctgctgacacccaccctcagaagatcaaggctgagctccacagtcgctcgcagtcg
acccccttccactttgtcttccgccgcgtcgcccacagcaacgcctcgttgtcagctccg
ccagagctcatggccaacctcaacgacctcactatgacctccagtccccaggccaacctg
aatgacctcgggatggacctgccgcccccctccaccctgcttaactcgggcctcagtccc
agtctgggccttagcctgccgcccagccacctcaatgaaaactccatatctgtatga
DBGET
integrated database retrieval system
