Pungitius pungitius (ninespine stickleback): 119214216
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Entry
119214216 CDS
T07626
Symbol
rtn4a
Name
(RefSeq) reticulon-4a isoform X1
KO
K20720
reticulon-4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119214216 (rtn4a)
03036 Chromosome and associated proteins [BR:
ppug03036
]
119214216 (rtn4a)
Membrane trafficking [BR:
ppug04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
119214216 (rtn4a)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119214216 (rtn4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
Motif
Other DBs
NCBI-GeneID:
119214216
NCBI-ProteinID:
XP_037321727
LinkDB
All DBs
Position
13:3137216..3160195
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AA seq
1013 aa
AA seq
DB search
MADNDHVSSTTPLFGGEVHHYEAEPDKPKQDLFSMDDIVDLVGGAQDALDRHLAEGRAPH
ESTEDLYPSSTLAEPEPVPVPGVTERDPGTAIPDSTSFASVLDDIPPLIAEKPDVVAPKV
EPESSQIEPEPQAAPGPEAAPQIDALPAADPWKAAPASAEAAERPAVTEEPPAPASYEPS
PSKAQPHPLMQFPTALGQKGESPAPISPLSPLHSPDSLEELSLTESPNQPPTSGFAASLG
SFSTAPPTTHSKDMAWVGEEGGSGPGRSQIKEDPLAGPYLSLGKDPGPHNPCEDSGVSVS
PEEKLISSDRSPTGPSPLSPQVKVPESQLASSNPTEHWDSPYLASQDNTKVPPMDAFSKD
TAPFSSSRYDQDLHDNHSDEDDDLMYEVKKNNNPFEGYSPLADSGYSHFGDFKSDNRASK
ISESPTPDLVLYGQTGESQDAPPSFLDEKKTFQTGNMAADSLMQSVNRYSSGLKDDDEDD
DDEEEEEEEDSAAVPTSLPDILKSSPLNPDKLDSGSSEGSPEQSPILERRMMESPNPPIN
LSANNPFAFDAKVSLLKEMTEELEVKGPEKVKAEDDPGFGAFDLVKEAAETSPSEIKDEL
PVKIEQKDWFSSHDAQKVKEQFEPLDFQGKKTPAEDSDSESPTADSLSPVLEAMAKNPAS
FQVETEKMDPKMELEEPEMAEEVSEHEISSEEFEFIERPPRGVIDEFLEALDTSKFASSK
PPEIPMDDDLSFGHNDVPPFSAPFAAEVAAPPEAEAEAPSQSSYRLLTQTSPQKSKAELE
KPDVQQPPAQAPPIHSAARKPDEAVAVKSAEGGKVFKMPNVNIRAVVDLLYWRDVKRTGV
VFGAALLLLLSLTVCSIVSVCSYIGLALLSVTICFRIYKGILQAIQKSDEGHPFKQYLDQ
EVALSEDVVHKYSDLALAKLNKTVCELRRLFLVEDLIDSIKFAGLMWILTYVGSLFNGLT
ILILVLIGVFSCPIVYEKHQTQIDHYVALVNNQVKDVVGKVQAKVPGMKRKAE
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaacgaccacgtctcttccaccactcctctgttcggcggggaggtgcaccac
tacgaggccgagccggacaagcccaaacaggacctcttcagcatggatgatatcgtggac
ttggtcggcggtgctcaggacgccctggaccgccacttggctgaaggcagagcgccacac
gagtccacagaagatctctacccgtcatcaacgttagcggagccggaaccggtgccggtg
ccaggggtgacggaacgtgacccggggactgccattccggactccaccagcttcgcctcc
gttctcgacgacatccctcctctaatcgccgagaagcccgacgtcgtcgccccgaaagtc
gaacccgagtcctcccagatcgagccggagccacaggctgcccccgggccagaggctgcc
ccgcagatcgacgccctcccagcggctgatccctggaaagcagcgccagcctccgcagaa
gcagcagagcgacctgcggtgacagaggaacctccggctccagcatcttatgaaccttct
ccttctaaagctcagcctcatcctctgatgcaattccctacagcacttgggcagaagggt
gagtcccctgctcccatctctcctctctccccacttcactcccccgactctctggaggag
ctctctctaaccgagagtcccaatcagccacctacttcgggatttgccgcatccttgggc
tccttctccactgcaccacccactactcattccaaggacatggcttgggtgggtgaagag
ggcggctctggaccaggccgtagtcagattaaggaagatcccttagctggtccttacctg
agtttagggaaagacccagggcctcataatccatgcgaggacagcggagtttccgtttca
cccgaggagaagctgataagctcagacaggtcccccactggcccctccccactgagccct
caggtgaaggtccccgagtctcaacttgcctcctctaacccaacagagcactgggattca
ccatacctagcatctcaagacaacaccaaggtccctcccatggatgccttctccaaggac
acggctccctttagctcttccaggtatgaccaagacctgcacgacaaccactccgatgaa
gacgatgacctgatgtatgaggtgaagaagaataataacccgttcgagggctactccccc
ctggcggacagcggctactctcatttcggagacttcaagtctgacaaccgagcctcaaaa
atatcagagagtcccaccccggatctggttctgtatggccagacgggagaatcccaagat
gcaccgccatctttcttagacgagaagaagacctttcagacgggcaacatggctgctgac
tcgctcatgcagtcagtgaaccgttactcgtctggcctgaaagacgacgacgaggacgat
gacgacgaagaggaggaggaggaagaagattccgccgctgtgcccacgtcgcttccggac
atcctgaagtcttctccgctcaaccctgacaaattggactccggctcctcggagggaagt
cccgagcagagtcccatccttgaacggaggatgatggagtcgcccaaccctcccatcaat
ctgtccgctaacaacccgttcgccttcgacgccaaggtgtccctgctgaaagagatgacc
gaggagttggaagtgaaagggcccgagaaagtaaaagcggaagacgacccgggcttcggc
gcgttcgatcttgtcaaagaggcggcggaaacctccccctctgagatcaaggacgagctg
cccgtcaagatcgagcagaaggattggttttccagccacgacgcccagaaagtgaaggaa
cagttcgagcctctcgacttccagggcaaaaagacccccgctgaggattcggattccgag
tcgccaacggcggactcgctgtctccggtcctggaggccatggccaagaaccctgccagc
ttccaggtggaaaccgagaagatggacccaaagatggagctggaggagccggagatggcc
gaggaggtctctgagcacgaaatctcctcggaggagtttgagttcatcgagcgcccaccc
cggggcgtcatcgacgagtttctcgaggctctggatacgtccaaatttgcctcctccaag
cccccggagatccccatggatgacgacctgagcttcgggcacaacgatgtgcccccgttt
tcggcgccgttcgctgcggaagtagctgcaccccccgaggccgaagcggaggccccaagt
cagagctcctaccgcctcctcacccaaacgtccccccagaagagcaaggccgagctggag
aagcccgacgttcagcagccccccgcccaagccccccccatccactccgcggcccgcaag
ccagacgaggcggtcgccgtgaagagcgcggagggcggcaaagtgtttaagatgccaaac
gtgaacataagagcagttgttgatctcctctactggcgtgatgtgaagagaaccggcgtg
gtgttcggcgccgccctgctgctgctcctctccctgacggtgtgcagcatcgtgagcgtc
tgctcctacatcggcctggctctcctctccgtcaccatctgcttcagaatatacaaaggc
atcctgcaggccatccagaagtccgatgaggggcacccgttcaagcagtacctggaccag
gaggtggcgctgtccgaggacgtggtccacaagtacagcgacttggctctggccaaactc
aacaagaccgtctgtgaattgaggcgcctgttcctggttgaggacctgatcgactctatc
aagtttgcgggcttgatgtggatcctgacttacgtcggctccttgttcaacggcctcact
attctgatcctggttctgatcggagtgttcagctgcccgatcgtctatgagaaacaccag
actcagatcgaccactacgtggctctggtcaacaaccaggtcaaagacgttgttggaaag
gtccaggcgaaggtccccgggatgaaacgcaaagccgagtga
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