KEGG   Pungitius pungitius (ninespine stickleback): 119214341
Entry
119214341         CDS       T07626                                 
Name
(RefSeq) ras-related protein ORAB-1-like
  KO
K07874  Ras-related protein Rab-1A
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Pathway
ppug04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    119214341
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ppug04131]
    119214341
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppug04147]
    119214341
   04031 GTP-binding proteins [BR:ppug04031]
    119214341
Membrane trafficking [BR:ppug04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    119214341
 Autophagy
  Other autophagy associated proteins
    119214341
Exosome [BR:ppug04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119214341
  Exosomal proteins of other body fluids (saliva and urine)
   119214341
  Exosomal proteins of colorectal cancer cells
   119214341
GTP-binding proteins [BR:ppug04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    119214341
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA SRPRB FeoB_N AAA_7 AAA ABC_tran PduV-EutP AAA_16 LANC_like Septin AAA_29 AAA_22 AAA_5 CRAL_TRIO_2
Other DBs
NCBI-GeneID: 119214341
NCBI-ProteinID: XP_037321955
LinkDB
Position
13:16828510..16835892
AA seq 203 aa
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG
NKCDLTTKKVVDYTTAKEFADSLAIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAA
GGEKPNVKLTPGTSVKPSPGGCC
NT seq 612 nt   +upstreamnt  +downstreamnt
atgaatcccgaatatgactatttattcaagctactcctgatcggtgactctggtgttgga
aagtcttgccttctcctccgatttgcagatgacacttacacagaaagttacattagcact
attggtgtggacttcaaaatacgaaccatagaactagatggaaagaccattaaacttcaa
atttgggacacggcgggtcaggagagatttcgtaccatcacatccagctactacagaggc
gctcatggtatcatcgtagtgtatgatgtcacagaccaggagtccttcaacaacgtcaaa
cagtggctacaggagatcgaccgctacgccagtgaaaatgtcaacaagcttttggttggg
aacaagtgcgacctgacgacaaagaaggtggtggattacacgacagcaaaagagtttgca
gactctctggctatcccctttttggaaactagcgccaagaacgccaccaacgtggagcag
gccttcatgactatggctgccgagattaagaagcgaatgggccctggggccacggccgca
ggaggggagaagcccaacgtgaagctgacccccggcaccagcgtcaagccctcgccagga
ggatgctgctaa

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