Pungitius pungitius (ninespine stickleback): 119214350
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Entry
119214350 CDS
T07626
Symbol
dhx32b
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppug03041
]
119214350 (dhx32b)
Enzymes [BR:
ppug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119214350 (dhx32b)
Spliceosome [BR:
ppug03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119214350 (dhx32b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Motif
Other DBs
NCBI-GeneID:
119214350
NCBI-ProteinID:
XP_037321970
LinkDB
All DBs
Position
13:complement(6086658..6093109)
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AA seq
740 aa
AA seq
DB search
MAQEMTGASGGDYSEGKSHPAETEASSPGDKGYDGVLELSRFDGLPHSSRYYKLLRERKE
LPVWRAKSDFMDTLAKGRFVIVSGSARTGRSSQIPQWCAEFCLSVRFQHGVVVCTQIHPQ
QAVDLALRAADEMDVNIGHEVGYDIPLEACSTHDTVLRYCTDVTLLREMMSDPLLERYGV
VVVDQAHQRTVATDVLRGLLKDIALQRPGLRVVLLTAVEPDAKQLAHFAGSAAPVILLES
PGAGEVVHSSTGDGYFLSAVRLVLEIHHTEEEGDVVVFLVTTQEIDLARDILCQEGHSLP
SDLGELLPVAVHPGQPGNLPITGGEEEEEGTGLTRRVFLTASPNEDFFWAAGSIRFVIDA
GLGKRLVYNPRIRTNSVTIQPISSSQATCRSQLAGPAGKCFCLYPEDRRLPAATRPRVVE
SDISSTVLFLKRMEIAGLGHCDFIDRPDPEGLMQALEELDYLAALDNDGNLSEIGIVMSE
FPLEPQMAKTLLASCEFDCVSEVVIAAAMLTAPTCFTVPSAEWTRGHMDLHHPEGDHFTL
INIYRAFEQRQQDPHCDVDAWCEERGLNRGALLAADALRAELLDTLRRIELPISPPAFGS
RNNARNIKRALLAGFFMQVARDVDGSGHYFILTHKHVAQIHPLSVYGARSPEAGLPEWVL
FHEHSFSEENCLRTATRITPEEFIRMAPQYFFYNLPPSESKDILQNILNHGASRYQKEKP
PTSADKPPEEEQTSDRCVLQ
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggagatgaccggtgcgtccggaggggattactcggaggggaaatcccaccct
gcagagacagaagcctccagtccgggggacaaaggctatgacggcgtcttggagcttagt
cggtttgatggactgcctcactcctccagatattacaaactgctccgagaaaggaaggag
ctgcccgtgtggagagcaaagagcgacttcatggacactttggccaaaggacgctttgtc
atcgtcagcggctcggccagaactgggagaagttctcaaattccccagtggtgtgccgag
ttctgcctgtcggtccggttccagcacggcgtggtggtttgtacccagattcaccctcag
caggcggtggatctcgccttgagggcggccgacgagatggacgtcaacatcggtcacgag
gtcgggtacgacatccctctggaggcgtgttccacccacgacacggtgctcaggtactgc
acggacgtcacgctcctgagggagatgatgtcggaccctttgctcgagcgctacggcgtg
gtggtggtggaccaggcccaccagaggaccgtggccaccgacgtgctccggggtctgctg
aaggacattgccctgcagaggccggggctccgggtggtccttctcacggctgtggaaccg
gacgcgaagcagctggcccacttcgccggctcggcggcccccgtgatcctcctggagagc
cccggcgccggggaggtggtgcacagcagcacgggcgacggttacttcctctccgccgtc
cgcctggtgctggagatccaccacacggaagaggaaggggatgtggtggtttttctggtg
acgacgcaggagatagatctggcccgtgacatcctgtgtcaggaggggcacagcttaccc
tccgatctgggcgagctgctgcccgtcgccgtgcaccctggccagcccgggaacctgcca
atcacggggggggaggaagaggaggaggggacgggtctgacccgcagagtgttcctcaca
gccagtccaaacgaggacttcttctgggccgccggctcgatacgcttcgtgattgacgcc
ggcctcgggaagagactcgtttataaccccaggatcagaacgaactccgtcaccattcag
ccaatcagctcgagtcaagccacatgtcgcagccagctggcaggtccagcaggcaagtgc
ttttgtctgtacccagaggaccgacggcttcccgcggcgactcggcctcgcgttgtggag
tcggacatctcttccacggtgctcttcttgaagaggatggagatcgccggcctgggccac
tgcgacttcatcgacaggccggatcccgaaggcctaatgcaggctctggaggagctggac
taccttgcagctctggataacgatggcaacctctctgagattggcatcgtcatgtccgag
ttccccctggagccccagatggccaaaactctgctcgcttcctgcgagtttgactgcgtt
agcgaggtggtcatcgccgccgccatgctaacggcaccgacttgcttcacggttccctcg
gcggagtggacccggggccacatggacctccatcacccagagggggaccacttcaccctc
atcaatatctacagggccttcgagcagcggcagcaggacccgcactgcgatgtggacgcg
tggtgtgaggagcggggcctgaaccgcggcgccctgctggcggccgacgcgcttcgcgcc
gagctcctggacaccctgaggaggatcgagctgcccatctcgccgcccgccttcggctcg
cggaacaacgcccggaacatcaagagggccctgctggcggggttcttcatgcaggtggcg
cgggacgtggatggatcaggccactacttcatcctgacccacaagcacgtggcacagatc
cacccgctgtccgtctacggggcccggagccccgaggcgggcctgcccgagtgggtactg
ttccacgagcactccttctccgaggagaactgcctgcgcaccgccacccgcatcacgccg
gaggagttcattcggatggcaccacagtattttttctacaatctcccgcctagtgagagc
aaagacatcctgcaaaacattttgaaccacggagcttctcggtaccaaaaggagaaaccg
ccgacctcagcagacaaaccccccgaggaggagcagacttctgaccgctgtgtcctccaa
tga
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