Pungitius pungitius (ninespine stickleback): 119214357
Help
Entry
119214357 CDS
T07626
Symbol
lrit2
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
119214357 (lrit2)
Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
119214357 (lrit2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
Ig_3
LRR_4
I-set
ig
LRR_1
LRR_5
Ig_2
fn3
V-set
LRR_EndoS
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
119214357
NCBI-ProteinID:
XP_037321977
LinkDB
All DBs
Position
13:complement(7984696..7988195)
Genome browser
AA seq
573 aa
AA seq
DB search
MDIICNLLFIALLNIPSLETYPQCLRGCSCVEDRHGRSLICMEESAFGAIPENLPDDMTK
IRIEKSHFTEIPRGAFSQTPALENLWLNFNDITVINSKGLEGLRNLTELRLQGNKLRSVP
WTAFEDTPALKILDLKHNQLDVLPEHALKFLPDLTYLDLSFNRLTVISKEVFQNWPLYQK
LQTKEEREGPAFGPNVVLALHDNAWLCDCRLKGFVEFIRSLSPPIILMNSYLTCSGPDFK
AGKFFHEVELQACVKPVVNTPSSNISLPLGANLTLRCFAKAQPNPAVWWTYGLKIIRGFR
ESQERVDENTIRSLLKIPSVHAADRGVYTCTAVNFIGNSSVSVRLDVHSPDGSRSPVLSD
KPAPPAASDENVYIDIQIAKQTVRGITIQWYAALERPTETWFTIHFGSAGSDQKEMIFIG
PGIHSYSVSDLMPATKYEICVTLKNQAPRNGQCIVFVTGSDITEMEQREQLIHIVVIVLA
MVLAVPIGMYACTTDTKLACLEGIMESWKNRRRERNSSGLERERQGTFDSLQAASDEGLV
NKDSSEDRKVRRRSEDRQHKGKGDHSRHTAELY
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggacataatttgtaacctgctatttattgctttgcttaacatcccgtcgcttgaaacg
tatcctcaatgtttacgtgggtgcagctgtgtagaagaccgccatggaaggtcgctcatt
tgcatggaggagagtgcgtttggggccataccggagaaccttccagatgatatgaccaaa
atacgaattgaaaaatctcacttcactgaaatacccaggggggcgttctcacagacgccc
gccctggaaaacctgtggttaaacttcaatgatattacagtgatcaactcaaagggcctg
gagggcttgaggaacttaactgagctccgtctgcaggggaacaagctgcgttcagtacca
tggacagcgttcgaagacacgccggccctgaagatcctggacctgaagcacaatcagctg
gacgtccttcccgagcatgccttaaaatttctgccagatctgacttacttagacttatcc
ttcaatcggcttactgtcatatctaaggaggttttccaaaattggcctctataccaaaaa
ctccagaccaaggaggagcgggaggggcccgctttcgggccgaacgtcgtcctggcgctc
cacgacaacgcgtggctctgcgactgccgcctgaaaggcttcgtggagttcatcaggtcc
ctgagcccccctattatactgatgaactcctacttgacctgctcggggccggacttcaag
gcaggcaagttcttccacgaggtagagctgcaggcgtgcgtgaagcccgtagtcaacacc
ccatcgtccaacatcagcctgcctctgggcgcaaacctcaccctacgctgcttcgctaag
gcccagccaaaccctgcggtgtggtggacatatggtctgaagataatcagaggatttcgt
gagtcccaggaaagagtggatgaaaacaccatcagatccctcctgaagattccctccgtg
catgctgccgaccgcggcgtctacacctgcaccgccgtcaacttcattggaaactcctcc
gtcagcgtccggctggacgtccactctcccgacggctcccggtcaccagtcctctctgac
aaaccggctccacctgctgccagtgatgaaaacgtctacattgacatccaaattgccaag
cagacagtacgcggtattaccattcagtggtacgcagcgttggaacgcccaacagaaacc
tggttcaccatccactttggcagcgcgggcagtgatcaaaaagaaatgatcttcatcggc
cctgggattcactcttactccgtctctgatttgatgcctgctaccaaatatgagatatgt
gtaacccttaaaaaccaggcgccgcgtaacggccagtgtattgtgttcgtaacaggaagt
gacatcacagagatggaacagagggagcagctgatacacatcgtggttatagttttagcc
atggtgctggcagtccctatcggcatgtatgcctgcaccaccgacaccaagttggcctgc
ctggagggtatcatggagtcctggaagaaccggcggagggagaggaactcatcagggctg
gagcgggagaggcagggcaccttcgacagcctgcaggcggccagcgacgagggcctggtc
aacaaagattccagtgaagacaggaaggtgaggagaaggtcagaagacagacaacataaa
ggcaaaggcgaccacagcagacacacagccgaactgtattaa
DBGET
integrated database retrieval system
