Pungitius pungitius (ninespine stickleback): 119214387
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Entry
119214387 CDS
T07626
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04080
Neuroactive ligand-receptor interaction
ppug04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119214387
04082 Neuroactive ligand signaling
119214387
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119214387
Ion channels [BR:
ppug04040
]
Ligand-gated channels
GABA-A
119214387
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
119214387
NCBI-ProteinID:
XP_037322034
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All DBs
Position
13:14544625..14577603
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AA seq
462 aa
AA seq
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MALSVSGGTLFTVLLISRLLENSMLNAEVKEGDILPPTIHKLMKGYNKYLRPFFDNGPVT
VGMSLDIASIDTISEINMDYTATIFLRQRWTDERLVFEGNKSLSLDGRLVELLWVPDTFI
VDSKKSFLHDITVENRLIRIFPNGTVLYALRITTTVACNMDLTKYPMDKQTCTLQLESWG
YNINDVMFYWTRGNESVSGLDTLQLAQYTVEDHYTSVSEAVYETGNYPKLVFHFELRRSI
LYFILETYVPSSLLVVLSWVSFWISLSSVPARICIGVTTVLTMTTLMMGARTSLPNANCF
IKAIDVYLGICFSFIFGALIEYAVAHFCSLSHLDAHMLMYGHHMHDLDDEMNGIITTISN
HNRAKRRKEAAATAAAVTPAPASLELTVSPSSPSGSEPKPEASPPKRTHWCLTALGTVRK
VLSALYCCRVENPHHIDNYSRVTFPLSFVMVNLLYWTYYLYF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggctctctctgtgtctggagggaccctgttcaccgtcctcctcattagcaggttgttg
gaaaattcgatgctcaacgccgaagtgaaagagggagatattctgcctcccaccatccat
aagctgatgaaaggatacaacaagtacctcaggcctttcttcgacaatggacctgtcacg
gtgggtatgagcctggacattgccagtattgacaccatctcagagatcaacatggactac
actgccaccatattcctccgccagcgctggacggacgagcgcttggtgttcgagggcaac
aagagcctgagcctggacgggcggctggtggagctgctctgggtgcccgacaccttcatc
gtcgactccaagaagtccttcctccacgacatcaccgtggagaacaggctgattcgcatc
ttccccaacgggaccgtcctctacgcgctgaggatcaccaccaccgtggcttgcaacatg
gatctgaccaagtatcccatggacaagcagacgtgcacgctgcaactggaaagctggggt
tacaacatcaatgacgtcatgttctactggacccgagggaacgagtcggtcagcggctta
gacactctacagctggcccagtacacggtggaggaccactacacctccgtctccgaggcc
gtgtatgaaactggcaattacccgaagctggtcttccactttgagctgaggaggagcatt
ctgtacttcatcctagagacctacgtcccctccagcctgttagtggtcctctcctgggtt
tccttctggatttccctgtcctccgttccagctcgtatctgtataggggtgaccacagta
ctgaccatgaccactctgatgatgggagcccggacgtctctgcccaatgccaactgcttc
attaaagccattgacgtttacttgggcatctgcttcagcttcatcttcggagcgctcatt
gagtacgccgtggcccacttctgcagcctctctcacctcgacgcgcacatgctgatgtac
ggccaccacatgcacgacctggacgacgaaatgaacggcatcatcaccaccatctccaat
cacaacagggccaagaggcgcaaggaggcggcagcgaccgccgccgccgtgaccccggcg
cccgcctccttggagctcaccgtaagcccgtccagcccctcgggcagcgagcctaagccg
gaagcgtcacccccgaagcgcacccactggtgcctcaccgctctgggcaccgtccgcaaa
gtgctgagcgccttatactgctgtcgggtggagaacccccaccacatagacaactactcc
agagtcaccttccccctctcgtttgtcatggtcaacctgctgtactggacgtattatctg
tacttttag
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