Pungitius pungitius (ninespine stickleback): 119214391
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Entry
119214391 CDS
T07626
Symbol
hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119214391 (hps1)
Membrane trafficking [BR:
ppug04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
119214391 (hps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
Motif
Other DBs
NCBI-GeneID:
119214391
NCBI-ProteinID:
XP_062422624
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Position
13:8848138..8855357
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AA seq
681 aa
AA seq
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MKCLLIASESAEVLFHWADHEFQQNVQKQYGASQEDGQGLPAFEDSISTLFAPIIISCIT
MVDRLCDSYTSFTTENHHVYVLHQFDECLYIAVNGDGEEGEADLRRKIYVVKKMTDVLFG
MVTLSSNLLRKELRPQDTEQRARLWKRLQSLLETYSHLRDNDQSFLVEAVERLIHPTLCE
QCIEFLERRLVQQLNSSGERAGEEVMHAFILVHTKLLAFYSSRNASTLSTSDLLVLIIIA
QNMYPSNTDSDDPNPEDVESTSGSGPEHFYTPEPSPPDRDSSSLGDKPGRGSTPVFEFVD
PDVQMAEDSLQTLEVPPPDPSTPRRVFLEVSLKDGLYPMMPHSMYCLPLWPGITLVLLTK
IPTSAVAMSVYTFLEAFTKLEKRLSEGQEGSAATRGQRTIHEVRSKLDKFIKALGPSEIQ
SGQLQKDWTEFKNLAFTRGGPGFSRLLIPSCKKMKTQLCGVYRQCFLLQSGPSNVSQRLS
PGLQERAQTMVQEKLMDWKDFLLVKSKRNITMVSYLEDFPGLIHFICVDRSSGQMIAPSL
NLTERNTSELGKGPLAQFIKRKVWTLVNTTRRYLQKGYSTVTFRDGDFYFCYFLWFENET
GFKLEAGDLPVLSDDSAPIGMLAWDYYRKLLRYYSKSHQGEVVKCYELLTVHLGVIPAEI
ILQHCRQLASKLWEPSRNPLL
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcttactgattgccagtgagagtgccgaggtcctcttccactgggccgaccac
gaatttcagcaaaatgtccagaagcagtatggggcgtctcaagaggacggccaggggctt
ccagccttcgaggacagcatcagcactctgtttgctccaattattatctcctgcatcacc
atggtggaccggctgtgtgacagctacacctccttcaccacggaaaaccaccacgtctac
gtcctacaccagttcgacgagtgtctctacattgctgtgaatggcgacggcgaggaagga
gaggccgacctgaggaggaagatctatgtggtgaaaaagatgaccgatgtcctcttcggc
atggtcaccctcagcagtaacctcctcaggaaagaactgcgtcctcaggatacagagcag
agggcgaggctgtggaagcgtctccagagcctgctcgagacctacagccacctgcgagac
aacgaccagagcttcttagtggaggccgtggagaggctgatccaccccacgctgtgtgag
cagtgcatcgagttcctggagcgccgcttagttcagcagctcaacagcagtggagagcga
gcaggggaggaggtgatgcacgccttcatcctggttcataccaagctgctcgcattctac
tccagccgcaacgcaagcaccctctccacctcggacctcctggtcctcatcatcatcgca
cagaatatgtatcctagcaacacagactcggacgatccaaatcctgaggatgtcgagagc
acatctggctctggtcctgaacatttttacacgccagagccctcgccgcctgacagggac
tcgagtagtttaggagataagccggggagagggagtacacctgtgtttgagtttgtggac
ccagacgtgcagatggcagaggacagcttacaaactctagaagttcctccgcccgacccg
tcgaccccccgccgagtcttcctagaggtctcactcaaagatgggttgtatcccatgatg
cctcactccatgtactgtctgcctctgtggcctggcatcacacttgtgttgctaacaaag
attcccaccagtgcggtggccatgtcagtgtacacgtttttggaggcctttaccaaactg
gagaaacgtttgagtgaaggccaagaaggatctgctgccactagaggacagcgaaccatc
catgaagtccgcagcaaacttgataaattcatcaaagctctggggcctagtgagatacag
tctgggcagttacaaaaggactggacagagttcaagaacttggccttcaccagaggagga
cctgggttcagcagacttctcattccctcttgtaagaagatgaagactcagctgtgtgga
gtgtacagacagtgttttctcctccagtccggaccaagtaacgtttctcaacgtctctcc
cccgggctgcaggaacgggcccagaccatggtgcaagagaaactgatggactggaaggac
ttcctgctggtgaaaagcaagagaaatatcaccatggtgtcttacctggaggatttccca
ggcctcatccatttcatctgcgtggaccgatccagcggccagatgatcgctccatcgctc
aacttgacggaacgcaacacgtccgagctggggaaggggccgctggctcagttcatcaaa
cgcaaggtgtggaccctggtgaacacaacacggcgttacctccagaagggttactccaca
gtaaccttccgcgatggagatttctacttctgctacttcctctggtttgaaaatgaaact
ggctttaagttggaggcaggcgacctccccgtcctttctgacgactctgcccccattggg
atgcttgcctgggactactacaggaagctgctgcgctactacagcaagagtcaccagggt
gaggtggtgaagtgttacgagctgctgacagtccacctgggggtcatccccgctgagatc
atcctgcagcactgcagacagctggcgagcaaactgtgggagccgtcgcgcaatcccctg
ctgtag
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