Pungitius pungitius (ninespine stickleback): 119214394
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Entry
119214394 CDS
T07626
Name
(RefSeq) LIM domain-binding protein 3-like
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119214394
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
119214394
Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
119214394
BRITE hierarchy
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GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
zf-C3HC4_3
PDZ_2
Motif
Other DBs
NCBI-GeneID:
119214394
NCBI-ProteinID:
XP_037322046
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All DBs
Position
13:2873345..2900267
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AA seq
566 aa
AA seq
DB search
MSAYTVSLPGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQGNLVQGDVIVAIDGVGTDG
MTHLEAQNKIKMANYNLALTMTKAKRSAPMQTQRFDTSMPMIPHPQALSPAAPNAGFNAA
ALPTHKPIEVKGPGGNATIIHAQYNTPISLYSQDAIMDAIAGQTQGKGPDGGQYGQPAAM
HPAPQAPPQQQYQPIPQQFQQPIPQQYQQPIQQQYQQPIQQQYQQPIQQQYQQPIPPQYQ
QPPTQQAPPTQQSSIQIPLGSTPPKVVSTACIYPSQPGPPPVPLQPHPEAAAHSPSPAGP
ASSNRPPWVSDTNFADKFDPGKMTTTTKKIQALPQSAPPPPAYVPNPSPSAPAASSPAPF
APSPAPFAPVARGVAQRAERFAASSRTALCGSCNSVIRGPFLVALGRSWHPEEFNCHYCH
MSLADVSFVEEQNNVYCENCYEEFFAPTCARCNTKIMGEVMHALRQTWHTTCFVCAACGK
AFGNSLFHMEDGEPYCEKDYISLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFVCAVCN
VNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcctacaccgtgtcgctgcccggccccgggccctggggcttcaggctgcagggg
ggcaaggacttcaacatgcccctgaccatctccaggatcactccgggaagcaaagcggcg
cagggtaacctggtgcagggtgacgtcatcgtcgccatagacggcgtcggcaccgacggg
atgactcacctggaggcccaaaacaagatcaagatggctaactacaacctggcgctcacc
atgaccaaggcgaagcgctccgctccgatgcagacgcagcgattcgacacctccatgccc
atgatcccacacccacaggctttgtccccagccgcccccaacgccggcttcaacgccgcc
gccctgccgacccataagccgatcgaggtgaaaggccccggcggcaacgccaccatcatc
cacgcgcagtacaacacgcccatcagcctgtactcgcaggacgccatcatggacgccatc
gcaggacagacgcaggggaaggggcccgacggaggtcaatatggtcagcctgcggcaatg
catccggccccacaagccccgcctcagcagcagtaccagccaatcccacagcagtttcag
cagccgatcccacagcagtatcagcagccgatccaacaacagtatcagcagccgatccaa
cagcagtatcaacagccgatccaacagcagtatcagcagccaataccgccacagtaccag
cagccccctactcaacaagccccgcccactcagcaaagctccattcagatccctcttggc
tccacccctcccaaggtggtcagcaccgcatgcatctacccatcgcaaccaggtccacct
cctgttccacttcagccccaccctgaagctgctgcccattccccgtctccggcaggcccc
gcctcctctaaccgacccccctgggtgtcggacaccaactttgccgacaagttcgacccc
gggaaaatgacaaccaccaccaagaagatccaggcactgccccagtccgctcctccgccc
ccagcatacgtccccaacccatctccctccgcacctgcggcttctagccccgcccccttc
gcaccgagccccgctccgttcgcccccgtggcgcggggtgtggcccaaagggcggagagg
tttgccgccagcagccgcacggctctctgtggatcctgtaacagcgtcatccggggcccc
ttcctggtggccctcggccggtcctggcaccccgaggagtttaactgtcactattgccac
atgtctctggctgacgtcagcttcgtggaggagcagaacaatgtctactgcgagaactgc
tacgaggagttcttcgctccaacctgtgcccgctgcaacaccaagatcatgggggaagtg
atgcacgccttgcggcagacgtggcacaccacctgctttgtttgcgctgcctgcggcaaa
gccttcggaaacagcctcttccacatggaggacggagagccgtactgcgagaaagattac
atctcactcttcagcaccaagtgtcatggctgtgacttccctgtggaggcaggtgataag
ttcatcgaggctctgggccacacttggcacgacacttgcttcgtctgtgcggtttgcaat
gtgaaccttgagggccagcctttctactcaaagaaagacaaacctctgtgcaagaagcac
gctcacgccatcaacgtgtag
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