Pungitius pungitius (ninespine stickleback): 119214405
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Entry
119214405 CDS
T07626
Symbol
cdh5
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04514
Cell adhesion molecules
ppug04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119214405 (cdh5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
119214405 (cdh5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppug04515
]
119214405 (cdh5)
04090 CD molecules [BR:
ppug04090
]
119214405 (cdh5)
Cell adhesion molecules [BR:
ppug04515
]
Cadherins
Major cadherins
119214405 (cdh5)
CD molecules [BR:
ppug04090
]
Proteins
119214405 (cdh5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_4
MG1
Cadherin_2
PCC_BT
Motif
Other DBs
NCBI-GeneID:
119214405
NCBI-ProteinID:
XP_037322062
LinkDB
All DBs
Position
13:complement(1440797..1465128)
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AA seq
797 aa
AA seq
DB search
MMAWLRLWTLGLMAIMSVALAVAGDSGLPVVEGHNEIVKKESHPVLFRQKRDWIWNSLYV
EEEKLAPSPYKIGKLKSSKNVVVKSFKIAGEGANDIFTVDEKGDLFVTKRLDREKKNAYH
LTAWMFDGNEQLVEDSGEFVVQVTDINDNSPVFPKTYNGSVRERSSIGTKVVEVTATDAD
DPSTANGELRYSLAPQGDFAAFTIHSETGVITCRTNTLDRETKSQYVVVVKAQDMRGFKT
GSTSNTNVTITVTDTNDNTASFTRKTYELNVREDHKLNEKIGTLEVEDRDEDWNKVPIFT
ILNNEMRQIFGVELSKPHKDGDLVLKQALDYETNSSYTFTVNVKEDTLPRGSPAENAKTA
VTTAQVNIKVLDVDEAPVFSKPVYTFTVMEELIVRDIGTVKARDPDRANRKIQYSIVTKD
CPIGIHPATGQLSTLRTLDRELEATHVFQVKAQEESSGLESFVEVNIAVQDVNDNKPELS
AEDVFVCENDPTDTVIGTLRATDEDEQPASFTFSLASESSNFSIRGRGNGTADVAVKQGP
FSLDDPKDYSVDVSISDGGRPPQTSVTRLAIKSCRCDGRRVPTQCKAGARRMGVSVHALI
AILLCILTILVIVILFVVRKRYQKDSLSNLKNSGEIHEQLVTYDEEGGGEMDTNGYDVSI
LSSACQDGSLLRHPDLHARPSLYAVVQKPPAHPHPHPHHHQNHHAPPPPPTACKGDMAVM
IEVKKDEADHDRDGFPYDTLHIYGYEGPESLAGSLSSLGTSSTGSNLDYDFLNEWGPRFR
TLAELYGVDGPDHCRQY
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttggctccggctgtggactcttgggctcatggcaattatgtccgtggctctc
gctgttgctggagatagtggccttcctgtggtggaaggccacaacgagatcgtgaagaag
gagtctcatcctgtcctcttcaggcagaagagggattggatctggaactctctctacgtg
gaggaggagaaacttgcacccagcccctacaagatcggaaagctgaagtcgagcaagaac
gtggttgtgaagagcttcaaaatagcgggtgaaggagcaaacgacatcttcaccgtggat
gagaagggagacctgttcgtcaccaaacgtctggaccgagagaagaagaacgcgtaccat
ctaactgcctggatgtttgatgggaacgaacagttggtagaggattctggagaatttgtg
gtccaggtgacggatatcaacgacaacagcccagttttccctaagacatacaatggatcc
gtcagggagcggtcctcgattggaactaaagttgttgaggtgacggcaaccgatgcagac
gacccgtccaccgccaacggagagctgcgatactctctggcccctcaaggagactttgct
gccttcaccatccacagcgagacaggtgtgatcacctgcaggacgaacaccctggaccgt
gaaaccaagagccagtacgtagtggtggttaaagctcaggacatgagaggatttaaaact
ggcagcacatccaacaccaacgtcaccatcaccgtgacagacaccaacgacaacactgct
tctttcacccgaaagacgtacgagctgaacgttcgggaggaccacaagttgaacgagaag
ataggcactctggaggtggaggacagggatgaggactggaacaaagtgcctatcttcacc
attttaaataatgaaatgcgccaaatctttggcgttgaactcagcaagccccacaaggat
ggcgacctggtgctcaaacaggctctggactacgagacaaacagcagctacactttcacc
gtcaatgtgaaagaagacacccttccccgtggttcccccgcggagaacgcaaagaccgcc
gtcaccaccgcccaggtgaacatcaaggtgctggacgtggacgaggcgccggtgttctcg
aagcccgtctacaccttcaccgtgatggaggaactcatcgtgagggacattggaaccgtc
aaagccagagaccccgacagagccaacaggaagatccagtactccatcgttaccaaggac
tgccccatcggcatccacccggcaaccggtcagctgtccaccctgaggacgctggaccga
gagctggaggccacacacgtgtttcaagttaaagcgcaggaggagtcgagtggtctggag
tcttttgttgaagtgaacatcgcggttcaggacgtcaacgacaacaagcccgagctgagc
gccgaggacgtcttcgtctgcgagaacgaccccacggacacggtgataggaaccctgaga
gccacagatgaagacgagcagccggcttccttcactttcagcttggccagcgagagctcc
aacttctccatccgaggccgcggcaacggcacggcggacgtcgcggtgaagcaaggcccg
ttcagcctggacgaccccaaggattacagcgtggacgtgagcatcagcgacggggggcgg
cccccccagaccagcgtcacccggctggcaatcaagtcgtgtcggtgtgacggcaggcgg
gttcccacgcagtgcaaagctggcgcccggaggatgggagtgagcgtgcacgccctgata
gccatcctgctctgcatcctgaccatactggtcatcgtgatcctgtttgtggtgaggaaa
cgttaccagaaggactctctgtccaacctgaagaacagcggcgagattcacgagcagctg
gtcacgtacgacgaggagggggggggggagatggacaccaacggctacgacgtctccatc
ctctcctccgcctgccaggacggctccctgctccgccacccggacctccacgcccgcccg
tctctctacgccgtggtgcagaagccccccgcccacccccacccccacccccaccaccac
caaaaccaccacgcgccgccgccgccgcccaccgcctgcaagggcgacatggccgtgatg
atcgaggtgaagaaggacgaggcggaccacgaccgcgacggcttcccgtacgacacgctg
cacatctacggctacgagggccccgagtctctggccggcagcctgagctccctcgggacc
tcgtccacgggctccaacctggactacgacttcctcaacgagtggggccccaggttcagg
accctggccgagctgtacggcgtggacggccccgaccactgccgtcagtactga
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