Pungitius pungitius (ninespine stickleback): 119214465
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Entry
119214465 CDS
T07626
Symbol
srbd1
Name
(RefSeq) S1 RNA-binding domain-containing protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_N
Tex_central_region
S1
HHH_9
HHH_7
YqgF
RNase_II_C_S1
HHH
Motif
Other DBs
NCBI-GeneID:
119214465
NCBI-ProteinID:
XP_037322157
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All DBs
Position
13:3978814..4012892
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AA seq
1014 aa
AA seq
DB search
MMRRPRTTTAKVAEKRDLDSDVSISESVSSDEDVDDWRPSEPKPKARSRAAKAPKAPAAA
AAAAAAKRPAKPKEPKAPKPPKAPKVPKVPKPRAPRKPAAEPKTKVPKVLKDSGEPVLAG
KKRKNFDDGNKDDNVAKNQKVKQTDCPEGESGPSVKMKEERVSFIVSDAHQAGVPAGQGS
SLAGLRPKKEEVEEEDFTFGEPCQKKQKTSGACLGRPTALPSSEAHGLRNELNMNWDMKE
LLSTLTCVDRWVCSNIVGLLQEENTVPFMVRYRKEMINHMDADAVRDVQMIYEELRCLAK
KTQTVVQTLKKDGVLTPELEQNLRSSRSADELDHVYSPYKKGSKLTKARRAKALGLEAAA
LAVMDTPHTLDLRSWVTPGTEGLSSVEEVATGVEHILADMIAKDPETLAYVKTLCENSFV
TIQSSVSKSALKEKEQEKSGPQQNKNKDIDKFHLYLDFTCNIQRIQPHQTLAINRGENLK
ILTVKVNIPDRLKNDFTSWCINNRWRPRTCGKEELRAIIKNAVEDSYKRLILPFLARSYR
TKLTTAAEKESIAMFVRNLRQRLLVCPVRGCVIMGVDPGFRHGCKLAVLSPTSQILHTDV
VYLHNAGNQREGDKLRHLMIKYSCAKVVIGNGTACRETESVFADLISRGCFHPLDVSYCI
TSEAGASIYSVSPEAVKELPDMDPNHRSAVSIGRRVQDPLAELVKIDPKHIGIGTYQHDV
SAGALKAALDGVVQECVSFVGVDINICSETLMRHVAGLNAGRARNISEWREQKGPFNNRE
QLKLVKGMGPKTYQQCAGFIRINPQTIRSGNSSPRPVPEKPAAKKAKGKTGVNVPTSFNP
LDQTCIHPESYHVAQRFLALVGGTADQIGSAGLRQCVESKVRAGGVEELAKTLDSTPETL
KLIVDGLTQPPGFDIRQNFGQADFKRGIVSMSDLRVGAVLTGRVDNTALFGAFVDIGVGR
PGLIHKSSITLDKLPASQRRRSLALGPGERVEVRVLNVDAQRGRIGLDLIRILQ
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgaaggccgagaacaacgactgccaaagttgcagaaaaaagagatctggactcc
gacgtgtcaatttctgagtcggtcagtagtgatgaagatgttgatgactggaggccatct
gagccaaagccaaaagcccgcagcagggcggccaaagcccccaaagcccccgcagcagca
gcagcagcagccgctgccaagagacctgccaaaccaaaggagccaaaagcacccaaacca
cctaaagctcccaaagtgccaaaagttcctaaaccacgggcaccacgcaaacctgcagcg
gagcctaaaacaaaagttcctaaagttctgaaggattctggtgaaccagtgttggctgga
aagaagaggaaaaattttgatgacggcaacaaagacgataatgttgccaagaaccaaaaa
gtgaagcaaactgattgtccagagggagagagtgggccaagtgtcaaaatgaaagaggag
agggtgtcattcatcgtgtccgacgcccatcaagcaggcgtaccggcaggccaggggtcg
tcactcgccgggcttaggccaaagaaagaggaagtggaggaggaggatttcaccttcggt
gagccctgtcaaaagaaacagaagaccagtggtgcctgtttgggtcgaccaactgcttta
ccatcgtcagaggcacacggcctgaggaatgaactcaatatgaactgggatatgaaagag
ctgctgtccaccctgacatgtgtggatcgatgggtgtgttcaaatatcgtcgggctgctt
caggaggagaacacggtgccattcatggtgcgctaccgcaaagagatgatcaaccacatg
gatgccgatgccgtccgagacgtgcagatgatatatgaggagttacgttgtttagccaag
aagacccagacggtggttcagaccctgaagaaagacggggttctgacacctgagctggag
caaaatctgaggagcagccgatctgccgatgaactggatcatgtgtattctccttacaag
aaaggcagtaagctgactaaggctcgcagagccaaagcactcggcctcgaggcggccgcc
ttggcagtcatggacacaccccatactctggatttgaggtcatgggtaacacctggtact
gaaggtctgtcatcggtggaagaagtggctacaggtgtggagcatatcttggctgacatg
atagccaaagatcctgagacacttgcctacgtgaaaacattgtgtgagaacagctttgtg
accatccagtcttccgtgtccaagtcggccctaaaggaaaaggagcaggagaagtccgga
ccccagcaaaacaaaaacaaggacatcgacaagttccacctctaccttgactttacctgc
aacatccaacgcatccaaccccatcagaccctggctattaaccgaggagagaatctgaag
attttgacagtgaaagtgaacattcccgacaggttgaagaatgacttcacgagttggtgc
atcaacaacaggtggaggccgaggacgtgtggaaaagaagagcttcgtgcaatcatcaag
aatgctgtcgaggactcttataaaaggctgattctgcctttcctcgctaggagctacagg
actaagctgacaactgcagcggagaaggagtcaatcgccatgtttgtgcgaaacctccgg
cagcgcctgctggtgtgcccagtgaggggctgcgtcatcatgggggtggaccccggcttt
agacatggctgtaagctggcagttctctcccccactagtcagatccttcatactgatgtt
gtgtacctgcataatgcaggcaaccaaagagaaggagacaaactgcgccacctcatgatc
aaatacagctgtgccaaggttgtcatcggcaacgggacagcgtgccgtgagaccgagtcc
gtcttcgcggacctcatctccaggggctgttttcaccctctggacgtgtcctactgtata
accagcgaggcgggagcctccatctacagcgtgagtcctgaggcggtcaaagagctgccg
gacatggaccccaaccacaggagtgccgtgtccattggaagacgtgtccaagatccgctg
gctgagcttgtgaagatcgatccaaagcacataggcattgggacataccagcatgatgtg
tcggccggcgctctgaaggcggctttggacggcgtggtgcaggaatgtgtgagcttcgtc
ggggtcgacatcaacatctgctccgagacgctgatgaggcatgtagctggcctgaatgcc
ggcagagcgcgaaatatctctgagtggagggagcagaagggtcccttcaacaacagggag
caactcaaattggtcaaaggcatggggcccaagacctaccagcagtgtgccggcttcatt
agaatcaacccgcaaaccatccgcagcggcaactcttcccctcgccctgtgccggagaaa
ccagcggccaagaaggccaaaggaaagactggcgtcaacgtgcccacctcgtttaacccc
ctggaccagacctgcatccacccggagtcctaccatgtggcacagaggtttctggcgctc
gtgggcgggactgcggaccagatcgggagtgcgggcctccggcagtgcgtggagagcaag
gtgcgggccggcggcgtggaggaactggccaagacgctggacagcacacccgagaccctc
aaactcatcgtagacggcctcacgcaaccccccgggttcgacatccgacaaaatttcggg
caagcggactttaagcggggcatcgtgtcgatgagtgacctgcgggtgggcgcagtgctg
acgggccgcgtggacaacacggcgctgttcggggccttcgtggacatcggcgtgggccgc
cccggcctcatccacaagagcagcatcaccctggacaagctgccggcgagccagcgccgc
cgcagcctggcgctggggcccggggagcgggtggaggtccgggtcctgaacgtggacgct
cagaggggacggatcgggctggacctgatcaggatcctgcaatag
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