Pungitius pungitius (ninespine stickleback): 119214474
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Entry
119214474 CDS
T07626
Symbol
arid5b
Name
(RefSeq) AT-rich interactive domain-containing protein 5B
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119214474 (arid5b)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Helix-turn-helix
ARID
119214474 (arid5b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ARID
Motif
Other DBs
NCBI-GeneID:
119214474
NCBI-ProteinID:
XP_037322165
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All DBs
Position
13:complement(4384875..4449198)
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AA seq
1182 aa
AA seq
DB search
MEPNSLKWVGSSCGLHGPYIFYKAFKFNRDGKPRILSLGDFFFVRCKPEDPICIAELQLL
WEERTSKQLLSSSKLYFLPEDTPQGRTVIHGEHEVIAVSEKVVVRLEDLVKWTVPDFPGW
THCLKGEPLKPAVLRELGTNGRREALHRYRESTLTSGLNFKDVQRERAQLGQEEDGRKVL
VLSYPQYCRFRSVVARLRAQPPSLLIDHTVLALGGIAALGGGTRILYCRDTFEHPALLQN
ESVCDEFAPNLKGRPRKKKLSISQRRDSQGQAQGQGSSGSTPGSTAVAAPDPSSPDCRTT
TKVKPNCKMVPNGKISSAKHKAYGLGKKSSAEDKEGGKDKEKEKEERREREENKEEETSE
ESRAEEQAFLVELYKYMKDRDTPIERIPFLGFKQINLWTMFQAAQKLGGYELITVRRQWK
HVYDELGGNPSSTSAATCTRRHYERLLLPYERHVKGEHDKPLPLVKAKKQEGGPEKPSGA
KAKAVGAKKFKGCNNPRPGSKKDRGEAAKDQEQSQESGGKEENGEPPATTKQEGPPGDGP
IVIEEEELHVTLKKEESFAVEPPSSPGLKEPDCRAPGAAPRSLHAGPHGPRPEWRQIGDA
LQAKLACEQQTEARFIPKIPYLPHRWDQNRAPGHVALPEPSSRVRDSIESHGGRVGKVLP
MCKQTDRQCVDLSSDSFPEKEDHVAIKKESAQNPTQTAAYCKSSQGVMSPLAKKKLLSQV
CDSNPFSFTSPCLQPPHPATAASSLPVIPAPERERENRKGDEEAAAAAGQRHGAASDVTP
EVAPIFRPSVIQHAQSSKPHQPERSASGEPPEAYGCRIGRHLQPQANAPWQPYLPQARHA
QDGAENAGEALLQGPGSQPRSYTGDCYSSPHLHSLYRQTESCLSQERMVGFPNGDRRERY
VRDHEGSFARGALEQEGLAYRSHYGDRTQTRVERREADDEPRDFSVSKPLSQRGSSFSKP
SFCSLPYPIMHQGLDSHPKACRVPPMTISPPTKQNPAESSQPFPSPKAPSDASHASPVRP
GKRSLSGPDGEDAPERKVRVVTPVHPAGSIRRGDPEELKLAEPAHGVHLNNRLPEGHPAA
YPPHLYTAMYPPGSLVSPGDALQQQHPGLQYLKSQSAVSPLMPPLAFHSMMLHRQLLAAS
PSPHHFYRHPGGAALYGDLLHLYPISTLPPPQLSSVHPSTRL
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggagccgaactcactgaagtgggtgggctcgtcttgcggtttacatggaccatatata
ttctataaagcctttaaatttaaccgggacggcaaaccgaggattctgtctctcggcgac
ttcttcttcgtcagatgtaaaccggaggatcctatttgcatagcggagcttcagctgctc
tgggaagaaagaacaagcaagcaacttttatcaagctccaaactttattttctaccagag
gatactccccagggacggacagtcatccacggagagcacgaggtcatcgcggtgtccgag
aaggtggtggtgcgtctggaggacctggtgaagtggacggtgcccgacttcccgggatgg
acccactgcctgaagggcgagcccctcaaacccgccgtgctgcgcgagctgggcaccaac
gggaggcgggaggccctgcaccgctaccgggagagcaccctgaccagcggactcaacttc
aaggatgtgcagcgggagagggcgcagctgggccaggaggaggacgggcggaaggttctg
gtcctcagctacccccagtactgccggttccgctcggtggtggcgcgcctcagggcgcag
ccgccctcgctgctcatcgaccacacggtgctggcgctgggcggcatcgccgcgctgggc
ggcggcaccaggatcctgtactgccgggacaccttcgagcatccggccctgctgcagaac
gagagcgtctgcgacgagttcgctcctaatctgaaggggcgacctcggaagaagaagctg
tccatctctcagaggagggactcccagggtcaggctcagggtcaaggttcatcagggtcg
accccggggtcaacagctgtggcggcgccggacccgtccagcccggactgcagaaccacc
accaaggtcaagcctaactgtaaaatggtccccaacggaaaaatctcctcggccaaacac
aaggcgtacggcctcggcaagaagtcctccgctgaggacaaggaggggggcaaggataag
gaaaaggagaaagaggagaggagggagagggaggaaaacaaagaggaggaaacatcagag
gagagccgagcggaggagcaagcgttcttagtggagctctacaagtacatgaaagaccga
gacacgcccatagagaggatccccttcctgggcttcaaacagatcaacctttggaccatg
tttcaagctgctcagaaactaggaggatatgagttaatcacggtccgcagacagtggaag
catgtatatgatgaattgggcgggaacccaagcagcacaagtgccgccacgtgtacacgg
agacactacgagaggctcctcctcccctacgagaggcacgtcaagggcgagcatgacaag
cccctccccttggtcaaagccaagaagcaggagggtggccccgagaagccttcaggagcc
aaagccaaggcggtgggggccaagaaattcaaaggctgcaacaaccccaggccggggagt
aaaaaggacagaggggaggcggcgaaggaccaagaacaatcgcaggagtccggcgggaaa
gaggagaacggcgagccgccggcgaccacaaagcaggagggacccccgggagacgggccg
atcgtaatagaggaggaagagttgcacgtcaccctgaagaaggaggagtcgttcgcggtg
gagccgccgtcttcgcccggcctcaaggagccggactgcagggccccgggcgccgctccc
cgctccctccacgcggggccgcacggcccccggcccgagtggaggcaaatcggcgacgcc
ctccaggccaaactcgcctgtgagcagcagaccgaagcgcgcttcattcctaaaatccct
tacctgcctcaccgctgggatcagaacagagcgcctggacacgttgctctgcccgagccc
tcctccagggtcagagactccatagaaagccacggcgggcgggtgggcaaagtgttgccc
atgtgcaagcagacggacagacagtgcgtggacctgagctcggattcctttccggagaaa
gaagaccacgtggccattaagaaggagtccgcccagaaccccacgcagacggcggcctac
tgcaaatccagccagggggtcatgtctcctttggccaaaaagaagctcctctcccaggtg
tgtgactccaaccctttctccttcacgtccccttgcctccagccgccacatcccgccaca
gcggcttcctccctccccgtcataccggcacccgaaagggagagggagaaccgaaagggg
gacgaggaagcagcggcggcggcagggcagaggcacggggcggcgtcggacgtcaccccg
gaggtggcgcccatattcaggccgtcggtcatccagcacgcgcagagcagcaagcctcac
cagccggagcggagcgcgtcgggggagccgcccgaggcgtacggctgccggatcggccgt
cacctccagcctcaagccaacgcgccgtggcagccctatctgccgcaggcccgccacgcc
caggacggcgcggagaacgccggggaggcgctcctccagggcccaggttcccagccccgg
agctacacgggcgactgctactcctccccccacctgcacagcctgtacaggcaaaccgag
agctgcctgagccaggagaggatggtcggcttccccaacggggaccggagggagcgctac
gtccgggaccacgaaggcagctttgcccgcggcgccctggagcaggagggcttggcctac
cgatcccactacggcgacaggactcaaacgcgcgtagagaggagggaggcggacgacgag
cccagagactttagcgtttccaaacccctctcccagagggggtcctccttctcgaagccc
tcgttctgcagtctcccttatcccatcatgcaccagggtttggattcccaccccaaggcg
tgcagagttcctcccatgaccatctcgccccccaccaaacagaacccggcagagtcgtcg
cagccgttccccagcccgaaggcgccgagcgacgcgtcccacgcgagccccgtgcggccc
ggcaagcggagcctctcggggcccgacggcgaggacgcccccgagaggaaggtccgcgtg
gtgacgccggtgcacccggccggctccatccgccgcggcgacccggaggagctcaaactg
gccgagccggcccacggcgtccacctcaacaaccgcctccccgagggccacccggccgcc
taccccccgcacctctacaccgccatgtacccgcccggcagcctggtgtcccccggggac
gcgctgcagcagcagcacccgggcctgcagtacctgaagagccagtcggcggtgtccccc
ctcatgccgccgctggccttccactccatgatgctccacaggcagctgctggccgccagc
cccagcccccaccacttctacaggcacccgggcggggcggcgctgtacggggacctgctg
cacctctaccccatctccaccctcccgccgccgcagctgtcctcggtgcaccccagcacc
agactgtga
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