Pungitius pungitius (ninespine stickleback): 119214550
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Entry
119214550 CDS
T07626
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119214550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119214550
03016 Transfer RNA biogenesis [BR:
ppug03016
]
119214550
Enzymes [BR:
ppug01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
119214550
Messenger RNA biogenesis [BR:
ppug03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
119214550
Transfer RNA biogenesis [BR:
ppug03016
]
Prokaryotic type
tRNA degradation factors
119214550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
119214550
NCBI-ProteinID:
XP_037322269
LinkDB
All DBs
Position
13:3915928..3923906
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AA seq
770 aa
AA seq
DB search
MRYLLRLGHSFARLHVRLCHQSVYSNHANPQRLVVDLGEKKLEISSGRFARFADGSAVVQ
LGDTSVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNYLRREMGTTDNEILTSRLI
DRAIRPLFPQGYFYDTQVLCNLLAVDGVNDPDVLAINAASAALSLSDIPWHGPIGAVRVG
MVDGQMLINPTRAEMTSSSLNLIVAGAPSSQVVMIEASAENVLQQDFCHAVKVGVKHTQQ
IILAIQQLAREQKITKRTPVRIFSAPTDMVEHVRQLASKKIYAVFTDYAHDKISRDEAIN
KVRLEAEEELKERFPQAEHFEIIESFNTVSKEVFRNLVLNEFKRCDGRELTALRNISCDV
DLFKPLHGSALFQRGQTQVLSSVTFDSLESSVKADIITTALSGVKSKNFMLHYEFPPYAT
NEIGKMGGINRRELGHGALAEKALRPIIPKDFPFTIRVTAEVLESNGSSSMASACGGSLA
LMDAGVPISSAVAGVAIGLISKANPEKPADILDYRLLTDILGIEDYLGDMDFKLAGTNKG
ITALQADVKIPGLPLKVVMEAIQQATVAKKEILAIMNKCTAKPRETRKENGPVVENVRVP
VSRRARFVGPGGYNLRRLQAQTGVTISQVDEETFSVFAPTPGAMSEAQDFIGEICKDDQE
QQLEFGAIYSATIVEIRDIGVMVKLYPNMSAVLLHNSQLDHKRIRHPSALGLEVGQQIQV
KYFGRDPTDGRMRISRKVLQSPAASVIKTLSEKQSISMGAGDGQGTTPDL
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaggtatttactccgtctcgggcactcgttcgcccgcctccacgtccgcttgtgtcac
cagagtgtttacagcaaccatgcgaacccacaaagactggtcgtggaccttggggagaag
aaacttgagatctcttcggggaggtttgctagatttgccgatggatctgcggtggtacag
ctgggagatacctctgtgatggtgacggctgtgagcaaaaccaaaccttctccgtcgcag
ttcatgcctcttgtggtggactacagacagaaggcagctgctgcggggcgaatccccacc
aactatttgaggcgagagatgggcaccactgacaacgagatcctcaccagcagactcata
gacagggcgatcagaccgctgtttcctcaaggctacttttacgatactcaggtcctttgt
aacctgctggcagttgacggtgtcaatgatccagatgtgctggctataaatgcagcttct
gctgctctgtccctgtccgacatcccgtggcacggacccataggtgctgtgcgggtgggc
atggtggacggacagatgctgatcaaccccaccagggcagagatgacgtccagcagtctg
aacctcattgtggcaggagctcccagcagtcaagtggtgatgattgaggcgtcagcggag
aacgttctgcagcaggacttttgccatgcggtgaaggtgggagtcaaacacacccagcag
atcatactggccatccagcagctggcgcgagaacagaagatcaccaagcgcaccccggtc
aggatcttctccgccccgactgacatggtggagcacgttcggcaattggcctctaagaag
atctatgcggttttcaccgattacgctcacgataagatttcaagagacgaggcaatcaac
aaagtccgactagaagccgaagaggagctaaaagaaaggttccctcaggcggagcacttt
gaaatcattgaatccttcaacactgtgagcaaagaagtcttccgcaatttagttttaaat
gagttcaagagatgtgatgggagggagctgactgctttgaggaacatttcctgcgacgtg
gacctctttaaaccgctgcatggctcagctctgttccagagaggacaaacgcaggtcctt
agcagtgtcacatttgactcactggaatccagtgtcaaagcagatattatcaccacagct
ttgagcggcgtcaaatccaaaaactttatgcttcattatgagttccctccgtatgcaacc
aatgagattggaaagatgggaggcatcaacaggagggagctgggacatggggctctggct
gagaaagctctgagacccatcattcctaaagacttccctttcactatccgggtcacggcc
gaggtgctggagtcaaacggatcttcctcaatggcttcagcgtgcggaggaagcctcgct
ctaatggatgcaggtgttcccatctcttcggctgtggcaggtgtagcaatcggcctcatc
tccaaggccaacccggagaaacccgctgacatcctagactacagattactcactgatatt
ctgggaatagaggattaccttggagacatggacttcaaattggcaggaacaaacaaaggc
atcactgctttacaggccgacgtgaagatcccaggtctgcctctcaaagtggtcatggag
gctatccaacaggccacagttgcaaagaaggagatcttggccatcatgaacaaatgtaca
gcaaaacctcgagagacgaggaaagagaacggacctgttgtggaaaatgtccgggtgccc
gtttccagacgagctcgcttcgtcggtccgggcggctacaacctccgcaggttacaagct
caaacaggtgtgacgataagtcaggtggacgaggagactttctccgtgttcgctccgaca
cccggagccatgagcgaagcccaagacttcatcggggaaatctgcaaagacgaccaggag
cagcagctggagtttggtgccatctactcggccaccatcgttgagatcagggacattggt
gtgatggtgaaactttatcccaacatgagcgctgttctgctgcacaactcccagctggac
cacaaacggatccgacatccaagtgctctgggtttagaggtgggacagcagatacaggtc
aagtacttcggacgggacccgacagacggcaggatgagaatttcgcggaaggtgcttcag
tcccctgctgcatctgttatcaaaacgctgagtgagaaacagagcatctccatgggcgca
ggcgacggccaggggacgacccccgatttgtga
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