Pungitius pungitius (ninespine stickleback): 119214592
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Entry
119214592 CDS
T07626
Symbol
lrit1a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
119214592 (lrit1a)
Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
119214592 (lrit1a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
ig
LRR_1
fn3
Ig_2
Ig_VEGFR-1-like_5th
LRR_5
C2-set_2
LRR_EndoS
C2-set_3
RNA_pol_Rpb1_2
Motif
Other DBs
NCBI-GeneID:
119214592
NCBI-ProteinID:
XP_037322336
LinkDB
All DBs
Position
13:complement(7988843..7993526)
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AA seq
651 aa
AA seq
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MFLVLLLGLYAATGELFSPVNSCPSQCSCFYHNLSDGSKARSVICNDPEISVVPVGFPFD
TSKLRIEKTAIQRIPSEAFNYLSNLEFLWMSFNTLSALSPDSFRELLNLEELRLDGNALT
AFPWECLMDMPSLRLLDLHNNQLPSLPAEATTYIKNLTYLDLSSNSLLTLPTEVLTTWLA
VKPVQGPESSKLILGLHDNPWVCDCRLYDLVQFQKSPTFSVAFIDTRLRCSAPESVSGVL
FTDAELRRCQLPRIHTAVARVRSAVGNNVLLRCGTIGVPIPDLSWRKADGQLLNGTVQQE
TSKEGITWSILRVPAVSYQDSGKYICKATNYAGNAEAVISLIVSNSPKPEGNQTSNDKKA
KVKKPNPVGKAAYQEKLVARYVVPTSTPSSLSALDPGLPPGLVADLPPGSYSLPDRATPG
PATPSNPEALLDLEKTNLSNLAANTSSLQQDPDRLVRSVKVVGDTDDTIYLNWRAPKAKN
TTAFSVLYAVFGERDMRKINVGAGQNRVTINGLVPRTKYIACVCVRGLIPKKEQCVIFST
DEAASATGTQRLINVIVITVACIIAVPLTVIVCCGALKRRIQKYWGKKSKDIQDSYVTFE
TLSPATKAKGLEGEYLNRLNPEESNRLLSARSSLDSEATAKIEGQPNEYFC
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcgtcctgctcctggggctctacgcggctacaggtgaacttttctccccggtg
aactcgtgtccgtcacagtgcagctgtttttaccacaacttgagtgatggatcaaaggcc
aggagcgtgatttgcaatgatcccgagatatcggttgtgcctgtcgggtttccctttgac
acgtccaagctgcgcattgagaagacggccattcagcggataccgagcgaagccttcaac
tacctctccaatctcgaattcctgtggatgtctttcaacacactgtccgccttgagcccg
gacagtttccgggaactgcttaacctggaagagcttcgtctggacgggaatgccctcacc
gcctttccctgggaatgtctcatggatatgcccagtctcagacttctcgatttgcacaac
aatcagctgccctcgctgccagcggaggccacgacttacatcaaaaacctcacctacttg
gatctgtcaagcaacagcttgctgaccctgccgacggaggtgctgaccacctggctggcg
gtgaaacccgtccaaggtccagagagctccaagttgatacttggtctccatgacaacccc
tgggtgtgtgactgccggctctacgacctggtccagttccagaagtctccgactttttca
gttgcatttattgacacgaggctgaggtgttcagcgccggaaagtgtatcaggggtactg
ttcactgacgcagagctgcggcgctgtcagctccctcgtattcacacagccgtggcacgc
gttcggagcgctgttgggaacaacgtgctgctccgctgtggcaccattggagtcccgatc
ccagacctgtcatggcgcaaggcagatgggcaactccttaatggaacagtccagcaggaa
acatcaaaggagggaatcacctggtccatcctgcgtgtcccagctgtgtcctaccaggac
tcggggaaatacatctgcaaggccactaactacgctgggaacgctgaagctgtcatttct
ctcattgtctctaactcaccaaaaccagaggggaaccaaacaagcaacgataagaaagcc
aaagtcaagaaacccaacccggtggggaaagctgcctaccaggagaaactggtggcccga
tatgtggttccaacctccaccccttcgtcactctcagccctggatccaggccttccacct
ggtcttgttgctgatcttccaccaggcagctacagcctacctgatagagccaccccaggc
cccgccaccccttccaacccagaagccctgctggatctggagaagactaatctgagcaac
ctggcggccaacacgtcatcgctgcagcaggacccggacaggttggtccgctcagtaaaa
gttgtgggggacacagatgatacaatatatttgaactggagagcccctaaggccaaaaac
acaacagcattcagtgtgctgtacgctgtgtttggagaaagggacatgagaaagatcaat
gttggggcaggacagaaccgcgttaccatcaacgggctcgtgcccaggaccaagtacatt
gcctgtgtgtgtgtgagggggctgatccccaagaaagagcagtgcgtcatattttccacg
gatgaagcggcgagcgctactggaacccagaggttgatcaatgtgatcgtgatcacagtg
gcctgtatcatcgcggtgccgctcacggtcatcgtgtgctgcggggctctgaagagacgc
attcagaagtactggggaaagaaatccaaggatatccaggattcctacgtgacctttgaa
acgctgtcacctgccacgaaggccaaagggctcgagggggagtatctgaacagactgaac
ccagaggagtccaaccggctgctgtcggctcgctccagcttggactctgaggcaacagcc
aagatagagggacagcctaacgagtacttctgctga
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